RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 COBLO75128 1261 aa19.74■□□□□ 0.75
RAPGEF3-212ENST00000490387 COPB2P35606 906 aa19.74■□□□□ 0.75
RAPGEF3-212ENST00000490387 RIOX2Q8IUF8 465 aa19.74■□□□□ 0.75
RAPGEF3-212ENST00000490387 CCDC82Q8N4S0 544 aa19.74■□□□□ 0.75
RAPGEF3-212ENST00000490387 MMP19Q99542 508 aa19.74■□□□□ 0.75
RAPGEF3-212ENST00000490387 DDX20Q9UHI6 824 aaKnown RBP19.74■□□□□ 0.75
RAPGEF3-212ENST00000490387 PNMA6FA0A0J9YX94 578 aa19.73■□□□□ 0.75
RAPGEF3-212ENST00000490387 CCDC174Q6PII3 467 aa19.73■□□□□ 0.75
RAPGEF3-212ENST00000490387 CPXCR1Q8N123 301 aa19.73■□□□□ 0.75
RAPGEF3-212ENST00000490387 RRP36Q96EU6 259 aaKnown RBP19.73■□□□□ 0.75
RAPGEF3-212ENST00000490387 AGBL1Q96MI9 1066 aa19.73■□□□□ 0.75
RAPGEF3-212ENST00000490387 RNF26Q9BY78 433 aaPredicted RBP19.73■□□□□ 0.75
RAPGEF3-212ENST00000490387 RIPK3Q9Y572 518 aa19.73■□□□□ 0.75
RAPGEF3-212ENST00000490387 CTDP1Q9Y5B0 961 aaPredicted RBP19.73■□□□□ 0.75
RAPGEF3-212ENST00000490387 TRIOBPQ9H2D6 2365 aa19.72■□□□□ 0.75
RAPGEF3-212ENST00000490387 CPLX1O14810 134 aa19.72■□□□□ 0.75
RAPGEF3-212ENST00000490387 PRPF3O43395 683 aaKnown RBP19.72■□□□□ 0.75
RAPGEF3-212ENST00000490387 CYBAP13498 195 aa19.72■□□□□ 0.75
RAPGEF3-212ENST00000490387 TAL1P17542 331 aaPredicted RBP19.72■□□□□ 0.75
RAPGEF3-212ENST00000490387 KCTD2Q14681 263 aa19.72■□□□□ 0.75
RAPGEF3-212ENST00000490387 SNRNP48Q6IEG0 339 aaKnown RBP19.72■□□□□ 0.75
RAPGEF3-212ENST00000490387 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.72■□□□□ 0.75
RAPGEF3-212ENST00000490387 HOMER1Q86YM7 354 aa19.72■□□□□ 0.75
RAPGEF3-212ENST00000490387 C7orf61Q8IZ16 206 aa19.72■□□□□ 0.75
RAPGEF3-212ENST00000490387 PHKBQ93100 1093 aa19.72■□□□□ 0.75
RAPGEF3-212ENST00000490387 PNMA2Q9UL42 364 aa19.72■□□□□ 0.75
RAPGEF3-212ENST00000490387 hCG_1642624A0A1W2PR95 340 aa19.71■□□□□ 0.75
RAPGEF3-212ENST00000490387 IGHA2P01877 340 aa19.71■□□□□ 0.75
RAPGEF3-212ENST00000490387 PKN1Q16512 942 aa19.71■□□□□ 0.75
RAPGEF3-212ENST00000490387 FBXO11Q86XK2 927 aa19.71■□□□□ 0.75
RAPGEF3-212ENST00000490387 CCDC83Q8IWF9 413 aa19.71■□□□□ 0.75
RAPGEF3-212ENST00000490387 NSUN7Q8NE18 718 aaKnown RBP19.71■□□□□ 0.75
RAPGEF3-212ENST00000490387 TRPV1Q8NER1 839 aa19.71■□□□□ 0.75
RAPGEF3-212ENST00000490387 MAML3Q96JK9 1138 aa19.71■□□□□ 0.75
RAPGEF3-212ENST00000490387 CCPG1Q9ULG6 757 aa19.71■□□□□ 0.75
RAPGEF3-212ENST00000490387 V9GY48 417 aaPredicted RBP19.71■□□□□ 0.75
RAPGEF3-212ENST00000490387 PFASO15067 1338 aa19.71■□□□□ 0.75
RAPGEF3-212ENST00000490387 STK36Q9NRP7 1315 aa19.71■□□□□ 0.75
RAPGEF3-212ENST00000490387 CDKL5O76039 1030 aa19.7■□□□□ 0.74
RAPGEF3-212ENST00000490387 TKFCQ3LXA3 575 aa19.7■□□□□ 0.74
RAPGEF3-212ENST00000490387 CPLX2Q6PUV4 134 aaKnown RBP19.7■□□□□ 0.74
RAPGEF3-212ENST00000490387 PIBF1Q8WXW3 757 aa19.7■□□□□ 0.74
RAPGEF3-212ENST00000490387 LLPHQ9BRT6 129 aaKnown RBP19.7■□□□□ 0.74
RAPGEF3-212ENST00000490387 AMNQ9BXJ7 453 aa19.7■□□□□ 0.74
RAPGEF3-212ENST00000490387 RBM27Q9P2N5 1060 aaKnown RBP19.7■□□□□ 0.74
RAPGEF3-212ENST00000490387 PPFIA3O75145 1194 aa19.69■□□□□ 0.74
RAPGEF3-212ENST00000490387 PGK2P07205 417 aa19.69■□□□□ 0.74
RAPGEF3-212ENST00000490387 SLC4A3P48751 1232 aa19.69■□□□□ 0.74
RAPGEF3-212ENST00000490387 CUL4AQ13619 759 aa19.69■□□□□ 0.74
RAPGEF3-212ENST00000490387 PFKFB3Q16875 520 aaPredicted RBP19.69■□□□□ 0.74
RAPGEF3-212ENST00000490387 SMARCC2Q8TAQ2 1214 aa19.69■□□□□ 0.74
RAPGEF3-212ENST00000490387 CLEC4DQ8WXI8 215 aa19.69■□□□□ 0.74
RAPGEF3-212ENST00000490387 SLC26A6Q9BXS9 759 aa19.69■□□□□ 0.74
RAPGEF3-212ENST00000490387 SEC63Q9UGP8 760 aaKnown RBP19.69■□□□□ 0.74
RAPGEF3-212ENST00000490387 K7ELQ4 463 aaPredicted RBP19.68■□□□□ 0.74
RAPGEF3-212ENST00000490387 JAK2O60674 1132 aa19.68■□□□□ 0.74
RAPGEF3-212ENST00000490387 COL6A1P12109 1028 aa19.68■□□□□ 0.74
RAPGEF3-212ENST00000490387 FDPSP14324 419 aaKnown RBP19.68■□□□□ 0.74
RAPGEF3-212ENST00000490387 SSRP1Q08945 709 aaKnown RBP19.68■□□□□ 0.74
RAPGEF3-212ENST00000490387 USH1GQ495M9 461 aa19.68■□□□□ 0.74
RAPGEF3-212ENST00000490387 MUM1L1Q5H9M0 696 aa19.68■□□□□ 0.74
RAPGEF3-212ENST00000490387 WWC2Q6AWC2 1192 aa19.68■□□□□ 0.74
RAPGEF3-212ENST00000490387 CHST13Q8NET6 341 aa19.68■□□□□ 0.74
RAPGEF3-212ENST00000490387 RNF146Q9NTX7 359 aa19.68■□□□□ 0.74
RAPGEF3-212ENST00000490387 PCDHA1Q9Y5I3 950 aa19.68■□□□□ 0.74
RAPGEF3-212ENST00000490387 ABCB11O95342 1321 aa19.68■□□□□ 0.74
RAPGEF3-212ENST00000490387 LCTP09848 1927 aa19.68■□□□□ 0.74
RAPGEF3-212ENST00000490387 PTPDC1A2A3K4 754 aa19.67■□□□□ 0.74
RAPGEF3-212ENST00000490387 OPLAHO14841 1288 aa19.67■□□□□ 0.74
RAPGEF3-212ENST00000490387 SEPT4O43236 478 aa19.67■□□□□ 0.74
RAPGEF3-212ENST00000490387 DTNBO60941 627 aa19.67■□□□□ 0.74
RAPGEF3-212ENST00000490387 ALAS1P13196 640 aa19.67■□□□□ 0.74
RAPGEF3-212ENST00000490387 SCG2P13521 617 aa19.67■□□□□ 0.74
RAPGEF3-212ENST00000490387 FXR1P51114 621 aaKnown RBP eCLIP19.67■□□□□ 0.74
RAPGEF3-212ENST00000490387 PRAMEF19Q5SWL8 479 aa19.67■□□□□ 0.74
RAPGEF3-212ENST00000490387 ANO1Q5XXA6 986 aa19.67■□□□□ 0.74
RAPGEF3-212ENST00000490387 TYW1BQ6NUM6 668 aa19.67■□□□□ 0.74
RAPGEF3-212ENST00000490387 TRIM22Q8IYM9 498 aa19.67■□□□□ 0.74
RAPGEF3-212ENST00000490387 GPKOWQ92917 476 aaPredicted RBP eCLIP19.67■□□□□ 0.74
RAPGEF3-212ENST00000490387 TRERF1Q96PN7 1200 aa19.67■□□□□ 0.74
RAPGEF3-212ENST00000490387 ZMYND8Q9ULU4 1186 aaPredicted RBP19.67■□□□□ 0.74
RAPGEF3-212ENST00000490387 DIS3Q9Y2L1 958 aaKnown RBP19.67■□□□□ 0.74
RAPGEF3-212ENST00000490387 hCG_1984214I3L0E3 225 aa19.66■□□□□ 0.74
RAPGEF3-212ENST00000490387 DNM1LO00429 736 aa19.66■□□□□ 0.74
RAPGEF3-212ENST00000490387 NFIBO00712 420 aa19.66■□□□□ 0.74
RAPGEF3-212ENST00000490387 DEXIO95424 95 aa19.66■□□□□ 0.74
RAPGEF3-212ENST00000490387 TRAF1Q13077 416 aa19.66■□□□□ 0.74
RAPGEF3-212ENST00000490387 ZNF792Q3KQV3 632 aa19.66■□□□□ 0.74
RAPGEF3-212ENST00000490387 ZNF713Q8N859 430 aaPredicted RBP19.66■□□□□ 0.74
RAPGEF3-212ENST00000490387 DDX11Q96FC9 970 aa19.66■□□□□ 0.74
RAPGEF3-212ENST00000490387 SENP6Q9GZR1 1112 aaPredicted RBP19.66■□□□□ 0.74
RAPGEF3-212ENST00000490387 ACAD9Q9H845 621 aa19.66■□□□□ 0.74
RAPGEF3-212ENST00000490387 HOMER2Q9NSB8 354 aa19.66■□□□□ 0.74
RAPGEF3-212ENST00000490387 BARHL2Q9NY43 387 aa19.66■□□□□ 0.74
RAPGEF3-212ENST00000490387 FBXO40Q9UH90 709 aa19.66■□□□□ 0.74
RAPGEF3-212ENST00000490387 STXBP3O00186 592 aa19.65■□□□□ 0.74
RAPGEF3-212ENST00000490387 AKAP17AQ02040 695 aaKnown RBP19.65■□□□□ 0.74
RAPGEF3-212ENST00000490387 GHRHRQ02643 423 aa19.65■□□□□ 0.74
RAPGEF3-212ENST00000490387 HEATR3Q7Z4Q2 680 aa19.65■□□□□ 0.74
RAPGEF3-212ENST00000490387 HSCBQ8IWL3 235 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms