RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 CDK19Q9BWU1 502 aa4.32□□□□□ -1.72
CRNKL1-203ENST00000490258 WNT10AQ9GZT5 417 aa4.32□□□□□ -1.72
CRNKL1-203ENST00000490258 PANK3Q9H999 370 aa4.32□□□□□ -1.72
CRNKL1-203ENST00000490258 PRDM10Q9NQV6 1147 aa4.32□□□□□ -1.72
CRNKL1-203ENST00000490258 SLC52A1Q9NWF4 448 aa4.32□□□□□ -1.72
CRNKL1-203ENST00000490258 SAMM50Q9Y512 469 aa4.32□□□□□ -1.72
CRNKL1-203ENST00000490258 TACC3Q9Y6A5 838 aa4.32□□□□□ -1.72
CRNKL1-203ENST00000490258 SNCAIPQ9Y6H5 919 aa4.32□□□□□ -1.72
CRNKL1-203ENST00000490258 BRWD3Q6RI45 1802 aa4.32□□□□□ -1.72
CRNKL1-203ENST00000490258 CAMTA1Q9Y6Y1 1673 aa4.32□□□□□ -1.72
CRNKL1-203ENST00000490258 PXDNQ92626 1479 aa4.31□□□□□ -1.72
CRNKL1-203ENST00000490258 PRR33A8MZF0 331 aa4.31□□□□□ -1.72
CRNKL1-203ENST00000490258 RNGTTO60942 597 aaKnown RBP4.31□□□□□ -1.72
CRNKL1-203ENST00000490258 LRIG2O94898 1065 aa4.31□□□□□ -1.72
CRNKL1-203ENST00000490258 CEACAM5P06731 702 aa4.31□□□□□ -1.72
CRNKL1-203ENST00000490258 TPM2P07951 284 aa4.31□□□□□ -1.72
CRNKL1-203ENST00000490258 XRCC6P12956 609 aaKnown RBP eCLIP4.31□□□□□ -1.72
CRNKL1-203ENST00000490258 INSRRP14616 1297 aa4.31□□□□□ -1.72
CRNKL1-203ENST00000490258 DDIT3P35638 169 aa4.31□□□□□ -1.72
CRNKL1-203ENST00000490258 TERF1P54274 439 aa4.31□□□□□ -1.72
CRNKL1-203ENST00000490258 PUM1Q14671 1186 aaKnown RBP eCLIP4.31□□□□□ -1.72
CRNKL1-203ENST00000490258 TAF1CQ15572 869 aaPredicted RBP4.31□□□□□ -1.72
CRNKL1-203ENST00000490258 KCNN1Q92952 543 aa4.31□□□□□ -1.72
CRNKL1-203ENST00000490258 ACSBG1Q96GR2 724 aa4.31□□□□□ -1.72
CRNKL1-203ENST00000490258 PNNQ9H307 717 aaKnown RBP4.31□□□□□ -1.72
CRNKL1-203ENST00000490258 TJP2Q9UDY2 1190 aa4.31□□□□□ -1.72
CRNKL1-203ENST00000490258 LMO7Q8WWI1 1683 aa4.31□□□□□ -1.72
CRNKL1-203ENST00000490258 IQSEC2Q5JU85 1478 aa4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 C1orf167Q5SNV9 1468 aa4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 OVOS2A0A0J9YW53 1432 aa4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 USP6P35125 1406 aa4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 OVOS2Q6IE36 1432 aa4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 SBNO2Q9Y2G9 1366 aa4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 GOLGA6L3A6NEY3 463 aa4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 CILPO75339 1184 aa4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 ERCC3P19447 782 aa4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 MCM4P33991 863 aa4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 MRE11P49959 708 aa4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 PSMD2Q13200 908 aa4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 IKZF1Q13422 519 aa4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 CCDC27Q2M243 656 aa4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 BNC2Q6ZN30 1099 aaPredicted RBP4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 ARHGAP27Q6ZUM4 889 aa4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 LSRQ86X29 649 aaPredicted RBP4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 MRPL41Q8IXM3 137 aaKnown RBP4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 CCDC146Q8IYE0 955 aa4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 DNAJB8Q8NHS0 232 aa4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 RIN3Q8TB24 985 aa4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 PPP1R13LQ8WUF5 828 aa4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 POLR3KQ9Y2Y1 108 aaPredicted RBP4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 EID1Q9Y6B2 187 aa4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 LRRC37A3O60309 1634 aa4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 LRP6O75581 1613 aa4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 SLIT3O75094 1523 aa4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 ITGB4P16144 1822 aa4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 SIPA1L3O60292 1781 aaPredicted RBP4.3□□□□□ -1.72
CRNKL1-203ENST00000490258 FAM135BQ49AJ0 1406 aa4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 ANKRD36BQ8N2N9 1353 aa4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 ABCC11Q96J66 1382 aa4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 IBTKQ9P2D0 1353 aaPredicted RBP4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 RPGRIP1LQ68CZ1 1315 aa4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 PRAMEF27A3QJZ7 478 aa4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 DNAJA2O60884 412 aa4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 CST3P01034 146 aaPredicted RBP4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 PPP2R1AP30153 589 aa4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 GRK4P32298 578 aa4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 TMF1P82094 1093 aa4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 FGD1P98174 961 aa4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 LMNB2Q03252 620 aa4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 CALD1Q05682 793 aaKnown RBP4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 HSP90AA2PQ14568 343 aaPredicted RBP4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 RRS1Q15050 365 aaKnown RBP4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 MAP3K11Q16584 847 aa4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 SPATS1Q496A3 300 aa4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 PRAMEF13Q5VWM6 474 aa4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 CCDC84Q86UT8 332 aaPredicted RBP4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 ZNF507Q8TCN5 953 aa4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 ACSF2Q96CM8 615 aaPredicted RBP4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 RSRP1Q9BUV0 290 aa4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 SEMA3GQ9NS98 782 aa4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 MAPK8IP1Q9UQF2 711 aa4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 MYRFQ9Y2G1 1151 aa4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 SNX11Q9Y5W9 270 aa4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 ST14Q9Y5Y6 855 aa4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 PARP4Q9UKK3 1724 aaKnown RBP4.29□□□□□ -1.72
CRNKL1-203ENST00000490258 AHDC1Q5TGY3 1603 aaPredicted RBP4.28□□□□□ -1.72
CRNKL1-203ENST00000490258 COL22A1Q8NFW1 1626 aaPredicted RBP4.28□□□□□ -1.72
CRNKL1-203ENST00000490258 GLI3P10071 1580 aa4.28□□□□□ -1.72
CRNKL1-203ENST00000490258 ACEP12821 1306 aa4.28□□□□□ -1.72
CRNKL1-203ENST00000490258 SCN11AQ9UI33 1791 aa4.28□□□□□ -1.72
CRNKL1-203ENST00000490258 F6X3S4 739 aa4.28□□□□□ -1.72
CRNKL1-203ENST00000490258 TRIM13O60858 407 aa4.28□□□□□ -1.72
CRNKL1-203ENST00000490258 F13A1P00488 732 aa4.28□□□□□ -1.72
CRNKL1-203ENST00000490258 IGHDP01880 384 aa4.28□□□□□ -1.72
CRNKL1-203ENST00000490258 HSP90AA1P07900 732 aaKnown RBP4.28□□□□□ -1.72
CRNKL1-203ENST00000490258 RPL6Q02878 288 aaKnown RBP4.28□□□□□ -1.72
CRNKL1-203ENST00000490258 HDXQ7Z353 690 aa4.28□□□□□ -1.72
CRNKL1-203ENST00000490258 THEMISQ8N1K5 641 aaPredicted RBP4.28□□□□□ -1.72
CRNKL1-203ENST00000490258 USHBP1Q8N6Y0 703 aa4.28□□□□□ -1.72
CRNKL1-203ENST00000490258 ASB11Q8WXH4 323 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms