RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 ZNF365Q70YC5 407 aa18.43■□□□□ 0.54
NUP58-213ENST00000490231 CLEC4DQ8WXI8 215 aa18.43■□□□□ 0.54
NUP58-213ENST00000490231 RILPL2Q969X0 211 aa18.43■□□□□ 0.54
NUP58-213ENST00000490231 TIFAQ96CG3 184 aa18.43■□□□□ 0.54
NUP58-213ENST00000490231 HIPK3Q9H422 1215 aa18.43■□□□□ 0.54
NUP58-213ENST00000490231 ZNF576Q9H609 170 aa18.43■□□□□ 0.54
NUP58-213ENST00000490231 IL23AQ9NPF7 189 aa18.43■□□□□ 0.54
NUP58-213ENST00000490231 WDR19Q8NEZ3 1342 aa18.43■□□□□ 0.54
NUP58-213ENST00000490231 RBM47A0AV96 593 aaKnown RBP18.42■□□□□ 0.54
NUP58-213ENST00000490231 PTPDC1A2A3K4 754 aa18.42■□□□□ 0.54
NUP58-213ENST00000490231 ACRP10323 421 aa18.42■□□□□ 0.54
NUP58-213ENST00000490231 TBC1D10CQ8IV04 446 aa18.42■□□□□ 0.54
NUP58-213ENST00000490231 ESR2Q92731 530 aa18.42■□□□□ 0.54
NUP58-213ENST00000490231 WDR11Q9BZH6 1224 aa18.42■□□□□ 0.54
NUP58-213ENST00000490231 RWDD1Q9H446 243 aaPredicted RBP18.42■□□□□ 0.54
NUP58-213ENST00000490231 OSBPL3Q9H4L5 887 aa18.42■□□□□ 0.54
NUP58-213ENST00000490231 SDSP20132 328 aa18.41■□□□□ 0.54
NUP58-213ENST00000490231 GPATCH4Q5T3I0 446 aaKnown RBP18.41■□□□□ 0.54
NUP58-213ENST00000490231 SLC30A10Q6XR72 485 aa18.41■□□□□ 0.54
NUP58-213ENST00000490231 RNF207Q6ZRF8 634 aa18.41■□□□□ 0.54
NUP58-213ENST00000490231 HERVK_113Q902F9 699 aa18.41■□□□□ 0.54
NUP58-213ENST00000490231 MPHOSPH6Q99547 160 aaKnown RBP18.41■□□□□ 0.54
NUP58-213ENST00000490231 NOC4LQ9BVI4 516 aaKnown RBP18.41■□□□□ 0.54
NUP58-213ENST00000490231 PBX4Q9BYU1 374 aa18.41■□□□□ 0.54
NUP58-213ENST00000490231 POLR3EQ9NVU0 708 aa18.41■□□□□ 0.54
NUP58-213ENST00000490231 CDH23Q9H251 3354 aa18.41■□□□□ 0.54
NUP58-213ENST00000490231 B4GALT4O60513 344 aa18.4■□□□□ 0.54
NUP58-213ENST00000490231 CALML3P27482 149 aa18.4■□□□□ 0.54
NUP58-213ENST00000490231 CPT1AP50416 773 aa18.4■□□□□ 0.54
NUP58-213ENST00000490231 PSMC6P62333 389 aa18.4■□□□□ 0.54
NUP58-213ENST00000490231 CHD1LQ86WJ1 897 aa18.4■□□□□ 0.54
NUP58-213ENST00000490231 DGKHQ86XP1 1220 aa18.4■□□□□ 0.54
NUP58-213ENST00000490231 DNERQ8NFT8 737 aa18.4■□□□□ 0.54
NUP58-213ENST00000490231 TRPV6Q9H1D0 765 aa18.4■□□□□ 0.54
NUP58-213ENST00000490231 MTIF3Q9H2K0 278 aaKnown RBP18.4■□□□□ 0.54
NUP58-213ENST00000490231 LCTP09848 1927 aa18.39■□□□□ 0.53
NUP58-213ENST00000490231 ZNF213O14771 459 aa18.39■□□□□ 0.53
NUP58-213ENST00000490231 FGBP02675 491 aa18.39■□□□□ 0.53
NUP58-213ENST00000490231 EDNRBP24530 442 aa18.39■□□□□ 0.53
NUP58-213ENST00000490231 RPS6P62753 249 aaKnown RBP18.39■□□□□ 0.53
NUP58-213ENST00000490231 PURAQ00577 322 aaKnown RBP18.39■□□□□ 0.53
NUP58-213ENST00000490231 CCDC178Q5BJE1 867 aa18.39■□□□□ 0.53
NUP58-213ENST00000490231 B4GALNT3Q6L9W6 998 aa18.39■□□□□ 0.53
NUP58-213ENST00000490231 PLEKHM2Q8IWE5 1019 aa18.39■□□□□ 0.53
NUP58-213ENST00000490231 RGS22Q8NE09 1264 aa18.39■□□□□ 0.53
NUP58-213ENST00000490231 MAF1Q9H063 256 aa18.39■□□□□ 0.53
NUP58-213ENST00000490231 ALDH8A1Q9H2A2 487 aaPredicted RBP18.39■□□□□ 0.53
NUP58-213ENST00000490231 NEDD4P46934 1319 aa18.39■□□□□ 0.53
NUP58-213ENST00000490231 UMODL1Q5DID0 1318 aa18.39■□□□□ 0.53
NUP58-213ENST00000490231 GRXCR1A8MXD5 290 aa18.38■□□□□ 0.53
NUP58-213ENST00000490231 NKRFO15226 690 aaKnown RBP eCLIP18.38■□□□□ 0.53
NUP58-213ENST00000490231 SUPT20HL2P0C7V6 817 aa18.38■□□□□ 0.53
NUP58-213ENST00000490231 PBX2P40425 430 aa18.38■□□□□ 0.53
NUP58-213ENST00000490231 NUCB1Q02818 461 aa18.38■□□□□ 0.53
NUP58-213ENST00000490231 PDE4DQ08499 809 aa18.38■□□□□ 0.53
NUP58-213ENST00000490231 RAB30Q15771 203 aa18.38■□□□□ 0.53
NUP58-213ENST00000490231 EYSQ5T1H1 3165 aa18.37■□□□□ 0.53
NUP58-213ENST00000490231 B4DLN1 442 aa18.37■□□□□ 0.53
NUP58-213ENST00000490231 MRPL12P52815 198 aaKnown RBP18.37■□□□□ 0.53
NUP58-213ENST00000490231 CCL23P55773 120 aa18.37■□□□□ 0.53
NUP58-213ENST00000490231 PPP2R5BQ15173 497 aa18.37■□□□□ 0.53
NUP58-213ENST00000490231 BRDTQ58F21 947 aaPredicted RBP18.37■□□□□ 0.53
NUP58-213ENST00000490231 IQCA1Q86XH1 822 aa18.37■□□□□ 0.53
NUP58-213ENST00000490231 RPUSD2Q8IZ73 545 aaKnown RBP18.37■□□□□ 0.53
NUP58-213ENST00000490231 OR6J1Q8NGC5 347 aa18.37■□□□□ 0.53
NUP58-213ENST00000490231 SCFD2Q8WU76 684 aa18.37■□□□□ 0.53
NUP58-213ENST00000490231 ZKSCAN3Q9BRR0 538 aa18.37■□□□□ 0.53
NUP58-213ENST00000490231 WNT8AQ9H1J5 351 aa18.37■□□□□ 0.53
NUP58-213ENST00000490231 GPHNQ9NQX3 736 aaPredicted RBP18.37■□□□□ 0.53
NUP58-213ENST00000490231 CXXC1Q9P0U4 656 aaPredicted RBP18.37■□□□□ 0.53
NUP58-213ENST00000490231 MSRAQ9UJ68 235 aa18.37■□□□□ 0.53
NUP58-213ENST00000490231 HIP1O00291 1037 aa18.36■□□□□ 0.53
NUP58-213ENST00000490231 GOLGA8HP0CJ92 632 aa18.36■□□□□ 0.53
NUP58-213ENST00000490231 CWC27Q6UX04 472 aaKnown RBP18.36■□□□□ 0.53
NUP58-213ENST00000490231 PNMA1Q8ND90 353 aa18.36■□□□□ 0.53
NUP58-213ENST00000490231 ANKS1AQ92625 1134 aa18.36■□□□□ 0.53
NUP58-213ENST00000490231 RAD50Q92878 1312 aa18.36■□□□□ 0.53
NUP58-213ENST00000490231 MTG1Q9BT17 334 aaPredicted RBP18.36■□□□□ 0.53
NUP58-213ENST00000490231 DIAPH3Q9NSV4 1193 aa18.36■□□□□ 0.53
NUP58-213ENST00000490231 CUL9Q8IWT3 2517 aa18.35■□□□□ 0.53
NUP58-213ENST00000490231 TNKSO95271 1327 aa18.35■□□□□ 0.53
NUP58-213ENST00000490231 A6NJR5 290 aa18.35■□□□□ 0.53
NUP58-213ENST00000490231 KPNA6O60684 536 aa18.35■□□□□ 0.53
NUP58-213ENST00000490231 KDM4AO75164 1064 aa18.35■□□□□ 0.53
NUP58-213ENST00000490231 IGHDP01880 384 aa18.35■□□□□ 0.53
NUP58-213ENST00000490231 PFKMP08237 780 aa18.35■□□□□ 0.53
NUP58-213ENST00000490231 MYL3P08590 195 aa18.35■□□□□ 0.53
NUP58-213ENST00000490231 USH1GQ495M9 461 aa18.35■□□□□ 0.53
NUP58-213ENST00000490231 OTOP2Q7RTS6 562 aa18.35■□□□□ 0.53
NUP58-213ENST00000490231 GAS2L1Q99501 681 aaPredicted RBP18.35■□□□□ 0.53
NUP58-213ENST00000490231 DSCC1Q9BVC3 393 aa18.35■□□□□ 0.53
NUP58-213ENST00000490231 UBA5Q9GZZ9 404 aa18.35■□□□□ 0.53
NUP58-213ENST00000490231 KAT14Q9H8E8 782 aa18.35■□□□□ 0.53
NUP58-213ENST00000490231 ABCB11O95342 1321 aa18.34■□□□□ 0.53
NUP58-213ENST00000490231 TXNP10599 105 aaKnown RBP18.34■□□□□ 0.53
NUP58-213ENST00000490231 CDC37Q16543 378 aaPredicted RBP18.34■□□□□ 0.53
NUP58-213ENST00000490231 ASPRV1Q53RT3 343 aa18.34■□□□□ 0.53
NUP58-213ENST00000490231 ZSCAN10Q96SZ4 725 aaPredicted RBP18.34■□□□□ 0.53
NUP58-213ENST00000490231 CPVLQ9H3G5 476 aa18.34■□□□□ 0.53
NUP58-213ENST00000490231 TRMT13Q9NUP7 481 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms