RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 MTIF3Q9H2K0 278 aaKnown RBP18.72■□□□□ 0.59
PLOD3-216ENST00000489927 GPCPD1Q9NPB8 672 aa18.72■□□□□ 0.59
PLOD3-216ENST00000489927 PRDM6Q9NQX0 595 aa18.72■□□□□ 0.59
PLOD3-216ENST00000489927 ADD3Q9UEY8 706 aaKnown RBP18.72■□□□□ 0.59
PLOD3-216ENST00000489927 ZBTB47Q9UFB7 747 aaPredicted RBP18.72■□□□□ 0.59
PLOD3-216ENST00000489927 MSRAQ9UJ68 235 aa18.72■□□□□ 0.59
PLOD3-216ENST00000489927 A0A0D9SFI3 127 aa18.71■□□□□ 0.59
PLOD3-216ENST00000489927 PTPDC1A2A3K4 754 aa18.71■□□□□ 0.59
PLOD3-216ENST00000489927 PDE1AP54750 535 aa18.71■□□□□ 0.59
PLOD3-216ENST00000489927 TJAP1Q5JTD0 557 aa18.71■□□□□ 0.59
PLOD3-216ENST00000489927 PPM1EQ8WY54 764 aa18.71■□□□□ 0.59
PLOD3-216ENST00000489927 WDR11Q9BZH6 1224 aa18.71■□□□□ 0.59
PLOD3-216ENST00000489927 ALDH8A1Q9H2A2 487 aaPredicted RBP18.71■□□□□ 0.59
PLOD3-216ENST00000489927 TCP11L1Q9NUJ3 509 aa18.71■□□□□ 0.59
PLOD3-216ENST00000489927 YBX2Q9Y2T7 364 aaKnown RBP18.71■□□□□ 0.59
PLOD3-216ENST00000489927 ADGRE1Q14246 886 aa18.7■□□□□ 0.58
PLOD3-216ENST00000489927 MCMDC2Q4G0Z9 681 aa18.7■□□□□ 0.58
PLOD3-216ENST00000489927 SLC30A10Q6XR72 485 aa18.7■□□□□ 0.58
PLOD3-216ENST00000489927 CLEC4DQ8WXI8 215 aa18.7■□□□□ 0.58
PLOD3-216ENST00000489927 SCLYQ96I15 445 aa18.7■□□□□ 0.58
PLOD3-216ENST00000489927 NKX2-4Q9H2Z4 354 aa18.7■□□□□ 0.58
PLOD3-216ENST00000489927 CHD7Q9P2D1 2997 aa18.7■□□□□ 0.58
PLOD3-216ENST00000489927 LOC102724159A0A0B4J2E5 919 aa18.69■□□□□ 0.58
PLOD3-216ENST00000489927 RBM47A0AV96 593 aaKnown RBP18.69■□□□□ 0.58
PLOD3-216ENST00000489927 HSPD1P10809 573 aaKnown RBP18.69■□□□□ 0.58
PLOD3-216ENST00000489927 PDHBP11177 359 aa18.69■□□□□ 0.58
PLOD3-216ENST00000489927 CALML3P27482 149 aa18.69■□□□□ 0.58
PLOD3-216ENST00000489927 RRP1P56182 461 aaKnown RBP18.69■□□□□ 0.58
PLOD3-216ENST00000489927 HAND2P61296 217 aa18.69■□□□□ 0.58
PLOD3-216ENST00000489927 PURAQ00577 322 aaKnown RBP18.69■□□□□ 0.58
PLOD3-216ENST00000489927 PWP2Q15269 919 aaKnown RBP18.69■□□□□ 0.58
PLOD3-216ENST00000489927 AKNAD1Q5T1N1 836 aa18.69■□□□□ 0.58
PLOD3-216ENST00000489927 ZNF589Q86UQ0 364 aaPredicted RBP18.69■□□□□ 0.58
PLOD3-216ENST00000489927 VWCEQ96DN2 955 aa18.69■□□□□ 0.58
PLOD3-216ENST00000489927 SLC28A3Q9HAS3 691 aa18.69■□□□□ 0.58
PLOD3-216ENST00000489927 TRMT13Q9NUP7 481 aaKnown RBP18.69■□□□□ 0.58
PLOD3-216ENST00000489927 POLR3EQ9NVU0 708 aa18.69■□□□□ 0.58
PLOD3-216ENST00000489927 MYL3P08590 195 aa18.68■□□□□ 0.58
PLOD3-216ENST00000489927 CPT1AP50416 773 aa18.68■□□□□ 0.58
PLOD3-216ENST00000489927 RABGGTBP53611 331 aa18.68■□□□□ 0.58
PLOD3-216ENST00000489927 RNF207Q6ZRF8 634 aa18.68■□□□□ 0.58
PLOD3-216ENST00000489927 RPUSD2Q8IZ73 545 aaKnown RBP18.68■□□□□ 0.58
PLOD3-216ENST00000489927 ZMYM6O95789 1325 aa18.68■□□□□ 0.58
PLOD3-216ENST00000489927 TTC28Q96AY4 2481 aa18.67■□□□□ 0.58
PLOD3-216ENST00000489927 CYP2C9P11712 490 aa18.67■□□□□ 0.58
PLOD3-216ENST00000489927 RPS6P62753 249 aaKnown RBP18.67■□□□□ 0.58
PLOD3-216ENST00000489927 ZNF543Q08ER8 600 aa18.67■□□□□ 0.58
PLOD3-216ENST00000489927 NMIQ13287 307 aaPredicted RBP18.67■□□□□ 0.58
PLOD3-216ENST00000489927 OR6J1Q8NGC5 347 aa18.67■□□□□ 0.58
PLOD3-216ENST00000489927 CRBNQ96SW2 442 aa18.67■□□□□ 0.58
PLOD3-216ENST00000489927 SLC4A7Q9Y6M7 1214 aa18.67■□□□□ 0.58
PLOD3-216ENST00000489927 TNKSO95271 1327 aa18.67■□□□□ 0.58
PLOD3-216ENST00000489927 XIRP2A4UGR9 3374 aa18.67■□□□□ 0.58
PLOD3-216ENST00000489927 SUPT20HL2P0C7V6 817 aa18.66■□□□□ 0.58
PLOD3-216ENST00000489927 SNHG28P0DPA3 235 aa18.66■□□□□ 0.58
PLOD3-216ENST00000489927 MYOGP15173 224 aa18.66■□□□□ 0.58
PLOD3-216ENST00000489927 IGFBP4P22692 258 aa18.66■□□□□ 0.58
PLOD3-216ENST00000489927 PDE4DQ08499 809 aa18.66■□□□□ 0.58
PLOD3-216ENST00000489927 CCDC85BQ15834 202 aaPredicted RBP18.66■□□□□ 0.58
PLOD3-216ENST00000489927 TICAM2Q86XR7 235 aa18.66■□□□□ 0.58
PLOD3-216ENST00000489927 TBC1D10CQ8IV04 446 aa18.66■□□□□ 0.58
PLOD3-216ENST00000489927 TTC14Q96N46 770 aa18.66■□□□□ 0.58
PLOD3-216ENST00000489927 MTG1Q9BT17 334 aaPredicted RBP18.66■□□□□ 0.58
PLOD3-216ENST00000489927 PNMA2Q9UL42 364 aa18.66■□□□□ 0.58
PLOD3-216ENST00000489927 GBF1Q92538 1859 aa18.65■□□□□ 0.58
PLOD3-216ENST00000489927 ZBBXA8MT70 800 aa18.65■□□□□ 0.58
PLOD3-216ENST00000489927 EDNRBP24530 442 aa18.65■□□□□ 0.58
PLOD3-216ENST00000489927 HDAC1Q13547 482 aaPredicted RBP18.65■□□□□ 0.58
PLOD3-216ENST00000489927 PPP2R5BQ15173 497 aa18.65■□□□□ 0.58
PLOD3-216ENST00000489927 MFSD6Q6ZSS7 791 aa18.65■□□□□ 0.58
PLOD3-216ENST00000489927 PPP1R13LQ8WUF5 828 aa18.65■□□□□ 0.58
PLOD3-216ENST00000489927 ATXN2LQ8WWM7 1075 aaKnown RBP18.65■□□□□ 0.58
PLOD3-216ENST00000489927 GPHNQ9NQX3 736 aaPredicted RBP18.65■□□□□ 0.58
PLOD3-216ENST00000489927 THEGQ9P2T0 379 aa18.65■□□□□ 0.58
PLOD3-216ENST00000489927 CCDC171Q6TFL3 1326 aa18.65■□□□□ 0.58
PLOD3-216ENST00000489927 WDR19Q8NEZ3 1342 aa18.65■□□□□ 0.58
PLOD3-216ENST00000489927 TNFRSF10AO00220 468 aa18.64■□□□□ 0.57
PLOD3-216ENST00000489927 PCP11498 1178 aaKnown RBP18.64■□□□□ 0.57
PLOD3-216ENST00000489927 TTLL4Q14679 1199 aa18.64■□□□□ 0.57
PLOD3-216ENST00000489927 NBPF20Q3BBV1 942 aa18.64■□□□□ 0.57
PLOD3-216ENST00000489927 FAM47CQ5HY64 1035 aa18.64■□□□□ 0.57
PLOD3-216ENST00000489927 PPP2R2DQ66LE6 453 aa18.64■□□□□ 0.57
PLOD3-216ENST00000489927 DEFB128Q7Z7B8 93 aa18.64■□□□□ 0.57
PLOD3-216ENST00000489927 DNERQ8NFT8 737 aa18.64■□□□□ 0.57
PLOD3-216ENST00000489927 SCFD2Q8WU76 684 aa18.64■□□□□ 0.57
PLOD3-216ENST00000489927 COPS5Q92905 334 aa18.64■□□□□ 0.57
PLOD3-216ENST00000489927 MPHOSPH6Q99547 160 aaKnown RBP18.64■□□□□ 0.57
PLOD3-216ENST00000489927 PCDHA11Q9Y5I1 949 aa18.64■□□□□ 0.57
PLOD3-216ENST00000489927 REV3LO60673 3130 aa18.64■□□□□ 0.57
PLOD3-216ENST00000489927 A6NJR5 290 aa18.63■□□□□ 0.57
PLOD3-216ENST00000489927 TRIM6-TRIM34B2RNG4 842 aa18.63■□□□□ 0.57
PLOD3-216ENST00000489927 NKRFO15226 690 aaKnown RBP eCLIP18.63■□□□□ 0.57
PLOD3-216ENST00000489927 PFKMP08237 780 aa18.63■□□□□ 0.57
PLOD3-216ENST00000489927 GOLGA8HP0CJ92 632 aa18.63■□□□□ 0.57
PLOD3-216ENST00000489927 ATP2A2P16615 1042 aaKnown RBP18.63■□□□□ 0.57
PLOD3-216ENST00000489927 USH1GQ495M9 461 aa18.63■□□□□ 0.57
PLOD3-216ENST00000489927 BRDTQ58F21 947 aaPredicted RBP18.63■□□□□ 0.57
PLOD3-216ENST00000489927 ASB2Q96Q27 587 aa18.63■□□□□ 0.57
PLOD3-216ENST00000489927 ZKSCAN3Q9BRR0 538 aa18.63■□□□□ 0.57
PLOD3-216ENST00000489927 CPVLQ9H3G5 476 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms