RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 WDR59Q6PJI9 974 aa17.58■□□□□ 0.4
BRD9-208ENST00000489816 SRGAP1Q7Z6B7 1085 aa17.58■□□□□ 0.4
BRD9-208ENST00000489816 ZFPM1Q8IX07 1006 aa17.58■□□□□ 0.4
BRD9-208ENST00000489816 CCSER1Q9C0I3 900 aa17.58■□□□□ 0.4
BRD9-208ENST00000489816 ZNF287Q9HBT7 754 aa17.58■□□□□ 0.4
BRD9-208ENST00000489816 COL5A3P25940 1745 aaPredicted RBP17.58■□□□□ 0.4
BRD9-208ENST00000489816 RCCD1A6NED2 376 aa17.58■□□□□ 0.4
BRD9-208ENST00000489816 LGALS16A8MUM7 142 aa17.58■□□□□ 0.4
BRD9-208ENST00000489816 G3V3G9 751 aa17.58■□□□□ 0.4
BRD9-208ENST00000489816 ENOX2Q16206 610 aaKnown RBP17.58■□□□□ 0.4
BRD9-208ENST00000489816 DCAF8Q5TAQ9 597 aa17.58■□□□□ 0.4
BRD9-208ENST00000489816 KRT25Q7Z3Z0 450 aa17.58■□□□□ 0.4
BRD9-208ENST00000489816 KIAA1328Q86T90 577 aa17.58■□□□□ 0.4
BRD9-208ENST00000489816 CERS5Q8N5B7 392 aa17.58■□□□□ 0.4
BRD9-208ENST00000489816 KIAA0895Q8NCT3 520 aa17.58■□□□□ 0.4
BRD9-208ENST00000489816 LACRTQ9GZZ8 138 aa17.58■□□□□ 0.4
BRD9-208ENST00000489816 MYMKA6NI61 221 aa17.57■□□□□ 0.4
BRD9-208ENST00000489816 RHOBTB3O94955 611 aa17.57■□□□□ 0.4
BRD9-208ENST00000489816 NFIAQ12857 509 aa17.57■□□□□ 0.4
BRD9-208ENST00000489816 SEPT12Q8IYM1 358 aa17.57■□□□□ 0.4
BRD9-208ENST00000489816 P2RX5Q93086 422 aa17.57■□□□□ 0.4
BRD9-208ENST00000489816 ZHX3Q9H4I2 956 aa17.57■□□□□ 0.4
BRD9-208ENST00000489816 SNED1Q8TER0 1413 aa17.57■□□□□ 0.4
BRD9-208ENST00000489816 CASZ1Q86V15 1759 aa17.57■□□□□ 0.4
BRD9-208ENST00000489816 CCDC88AQ3V6T2 1871 aa17.57■□□□□ 0.4
BRD9-208ENST00000489816 COL22A1Q8NFW1 1626 aaPredicted RBP17.57■□□□□ 0.4
BRD9-208ENST00000489816 PHACTR2O75167 634 aa17.57■□□□□ 0.4
BRD9-208ENST00000489816 UTP14CQ5TAP6 766 aaKnown RBP17.57■□□□□ 0.4
BRD9-208ENST00000489816 SAMD1Q6SPF0 538 aaPredicted RBP17.57■□□□□ 0.4
BRD9-208ENST00000489816 PYM1Q9BRP8 204 aaKnown RBP17.57■□□□□ 0.4
BRD9-208ENST00000489816 USP40Q9NVE5 1235 aa17.57■□□□□ 0.4
BRD9-208ENST00000489816 USP17L15C9J2P7 530 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 USP17L13C9JLJ4 530 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 USP17L11C9JVI0 530 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 USP17L18D6R9N7 530 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 USP17L22D6RA61 530 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 USP17L17D6RBQ6 530 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 USP17L19D6RCP7 530 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 USP17L20D6RJB6 530 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 USP17L24Q0WX57 530 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 CT47A1Q5JQC4 288 aaPredicted RBP17.56■□□□□ 0.4
BRD9-208ENST00000489816 USP17L6PQ6QN14 398 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 ANKRD13CQ8N6S4 541 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 CALML4Q96GE6 196 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 NAPGQ99747 312 aaPredicted RBP17.56■□□□□ 0.4
BRD9-208ENST00000489816 SPZ1Q9BXG8 430 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 MMRN2Q9H8L6 949 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 ANKZF1Q9H8Y5 726 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 EPHB6O15197 1021 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 ATP2B4P23634 1241 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 RBM17Q96I25 401 aaKnown RBP17.56■□□□□ 0.4
BRD9-208ENST00000489816 TRERF1Q96PN7 1200 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 SEMA6BQ9H3T3 888 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 MTMR4Q9NYA4 1195 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 RASSF10A6NK89 507 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 USP17L10C9JJH3 530 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 ZNF185O15231 689 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 OAS2P29728 719 aaKnown RBP17.56■□□□□ 0.4
BRD9-208ENST00000489816 RBM5P52756 815 aaKnown RBP eCLIP17.56■□□□□ 0.45e-8■■■□□ 16
BRD9-208ENST00000489816 LONRF2Q1L5Z9 754 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 TMED8Q6PL24 325 aaPredicted RBP17.56■□□□□ 0.4
BRD9-208ENST00000489816 SNX29Q8TEQ0 813 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 RABGGTAQ92696 567 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 TANGO6Q9C0B7 1094 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 DBNDD1Q9H9R9 158 aa17.56■□□□□ 0.4
BRD9-208ENST00000489816 KIAA1551Q9HCM1 1747 aa17.55■□□□□ 0.4
BRD9-208ENST00000489816 ATP1A1P05023 1023 aaKnown RBP17.55■□□□□ 0.4
BRD9-208ENST00000489816 DNA2P51530 1060 aa17.55■□□□□ 0.4
BRD9-208ENST00000489816 HERVK_113P62684 666 aa17.55■□□□□ 0.4
BRD9-208ENST00000489816 GRB10Q13322 594 aa17.55■□□□□ 0.4
BRD9-208ENST00000489816 ZNF507Q8TCN5 953 aa17.55■□□□□ 0.4
BRD9-208ENST00000489816 GJD4Q96KN9 370 aaPredicted RBP17.55■□□□□ 0.4
BRD9-208ENST00000489816 FAM53CQ9NYF3 392 aa17.55■□□□□ 0.4
BRD9-208ENST00000489816 ITIH6Q6UXX5 1313 aa17.55■□□□□ 0.4
BRD9-208ENST00000489816 EDIL3O43854 480 aa17.55■□□□□ 0.4
BRD9-208ENST00000489816 PPP1R11O60927 126 aaPredicted RBP17.55■□□□□ 0.4
BRD9-208ENST00000489816 SMC1AQ14683 1233 aaKnown RBP17.55■□□□□ 0.4
BRD9-208ENST00000489816 ECM1Q16610 540 aa17.55■□□□□ 0.4
BRD9-208ENST00000489816 MSL1Q68DK7 614 aa17.55■□□□□ 0.4
BRD9-208ENST00000489816 KIAA0825Q8IV33 1275 aa17.55■□□□□ 0.4
BRD9-208ENST00000489816 ZSCAN29Q8IWY8 852 aaPredicted RBP17.55■□□□□ 0.4
BRD9-208ENST00000489816 ZC3H12CQ9C0D7 883 aaKnown RBP17.55■□□□□ 0.4
BRD9-208ENST00000489816 RREB1Q92766 1687 aa17.55■□□□□ 0.4
BRD9-208ENST00000489816 APBA1Q02410 837 aa17.54■□□□□ 0.4
BRD9-208ENST00000489816 GABPB1Q06547 395 aaPredicted RBP17.54■□□□□ 0.4
BRD9-208ENST00000489816 SV2BQ7L1I2 683 aa17.54■□□□□ 0.4
BRD9-208ENST00000489816 ADGRF4Q8IZF3 695 aa17.54■□□□□ 0.4
BRD9-208ENST00000489816 NEK11Q8NG66 645 aa17.54■□□□□ 0.4
BRD9-208ENST00000489816 BLOC1S4Q9NUP1 217 aa17.54■□□□□ 0.4
BRD9-208ENST00000489816 CCNE1P24864 410 aa17.54■□□□□ 0.4
BRD9-208ENST00000489816 NELFCDQ8IXH7 590 aa17.54■□□□□ 0.4
BRD9-208ENST00000489816 DAGLBQ8NCG7 672 aa17.54■□□□□ 0.4
BRD9-208ENST00000489816 ABCB6Q9NP58 842 aa17.54■□□□□ 0.4
BRD9-208ENST00000489816 IL1R1P14778 569 aa17.54■□□□□ 0.4
BRD9-208ENST00000489816 ADCY7P51828 1080 aa17.54■□□□□ 0.4
BRD9-208ENST00000489816 VSNL1P62760 191 aa17.54■□□□□ 0.4
BRD9-208ENST00000489816 KCNB1Q14721 858 aa17.54■□□□□ 0.4
BRD9-208ENST00000489816 FKBP15Q5T1M5 1219 aa17.54■□□□□ 0.4
BRD9-208ENST00000489816 SLC30A10Q6XR72 485 aa17.54■□□□□ 0.4
BRD9-208ENST00000489816 FNBP4Q8N3X1 1017 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms