RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 MARK1Q9P0L2 795 aa10.72□□□□□ -0.69
TNRC6B-208ENST00000489500 SRRDQ9UH36 339 aa10.72□□□□□ -0.69
TNRC6B-208ENST00000489500 AGTPBP1Q9UPW5 1226 aa10.72□□□□□ -0.69
TNRC6B-208ENST00000489500 MYPNQ86TC9 1320 aa10.72□□□□□ -0.69
TNRC6B-208ENST00000489500 RFX7Q2KHR2 1363 aa10.72□□□□□ -0.69
TNRC6B-208ENST00000489500 SERTM1A2A2V5 107 aa10.71□□□□□ -0.69
TNRC6B-208ENST00000489500 RAB11FIP3O75154 756 aa10.71□□□□□ -0.69
TNRC6B-208ENST00000489500 IFIT2P09913 472 aaKnown RBP10.71□□□□□ -0.69
TNRC6B-208ENST00000489500 CYP7A1P22680 504 aa10.71□□□□□ -0.69
TNRC6B-208ENST00000489500 ZAP70P43403 619 aa10.71□□□□□ -0.69
TNRC6B-208ENST00000489500 USP5P45974 858 aa10.71□□□□□ -0.69
TNRC6B-208ENST00000489500 GCLCP48506 637 aaPredicted RBP10.71□□□□□ -0.69
TNRC6B-208ENST00000489500 DGKGP49619 791 aa10.71□□□□□ -0.69
TNRC6B-208ENST00000489500 CEP85Q6P2H3 762 aa10.71□□□□□ -0.69
TNRC6B-208ENST00000489500 CHSY3Q70JA7 882 aa10.71□□□□□ -0.69
TNRC6B-208ENST00000489500 TTC6Q86TZ1 520 aa10.71□□□□□ -0.69
TNRC6B-208ENST00000489500 SH3RF3Q8TEJ3 882 aaPredicted RBP10.71□□□□□ -0.69
TNRC6B-208ENST00000489500 TGFBRAP1Q8WUH2 860 aa10.71□□□□□ -0.69
TNRC6B-208ENST00000489500 KIF1BPQ96EK5 621 aa10.71□□□□□ -0.69
TNRC6B-208ENST00000489500 TSPAN10Q9H1Z9 355 aaPredicted RBP10.71□□□□□ -0.69
TNRC6B-208ENST00000489500 AVENQ9NQS1 362 aaPredicted RBP10.71□□□□□ -0.69
TNRC6B-208ENST00000489500 C19orf81C9J6K1 198 aa10.7□□□□□ -0.7
TNRC6B-208ENST00000489500 CYP2E1P05181 493 aaPredicted RBP10.7□□□□□ -0.7
TNRC6B-208ENST00000489500 GRK4P32298 578 aa10.7□□□□□ -0.7
TNRC6B-208ENST00000489500 ATP1A2P50993 1020 aa10.7□□□□□ -0.7
TNRC6B-208ENST00000489500 SPP2Q13103 211 aa10.7□□□□□ -0.7
TNRC6B-208ENST00000489500 ZNF468Q5VIY5 522 aaPredicted RBP10.7□□□□□ -0.7
TNRC6B-208ENST00000489500 MAPKAPK5Q8IW41 473 aa10.7□□□□□ -0.7
TNRC6B-208ENST00000489500 PANK1Q8TE04 598 aa10.7□□□□□ -0.7
TNRC6B-208ENST00000489500 DBNLQ9UJU6 430 aaKnown RBP10.7□□□□□ -0.7
TNRC6B-208ENST00000489500 PRR12Q9ULL5 1215 aa10.7□□□□□ -0.7
TNRC6B-208ENST00000489500 EXOC6BQ9Y2D4 811 aa10.7□□□□□ -0.7
TNRC6B-208ENST00000489500 GNB5O14775 395 aa10.69□□□□□ -0.7
TNRC6B-208ENST00000489500 TNPO2O14787 897 aaKnown RBP10.69□□□□□ -0.7
TNRC6B-208ENST00000489500 CYP2C8P10632 490 aa10.69□□□□□ -0.7
TNRC6B-208ENST00000489500 RLBP1P12271 317 aa10.69□□□□□ -0.7
TNRC6B-208ENST00000489500 IRX3P78415 501 aaPredicted RBP10.69□□□□□ -0.7
TNRC6B-208ENST00000489500 CCAR1Q8IX12 1150 aaKnown RBP10.69□□□□□ -0.7
TNRC6B-208ENST00000489500 MAGEB6Q8N7X4 407 aa10.69□□□□□ -0.7
TNRC6B-208ENST00000489500 RHPN1Q8TCX5 695 aa10.69□□□□□ -0.7
TNRC6B-208ENST00000489500 SH3TC2Q8TF17 1288 aa10.69□□□□□ -0.7
TNRC6B-208ENST00000489500 ZNF384Q8TF68 577 aa10.69□□□□□ -0.7
TNRC6B-208ENST00000489500 GTF3C2Q8WUA4 911 aaPredicted RBP10.69□□□□□ -0.7
TNRC6B-208ENST00000489500 EAF2Q96CJ1 260 aaPredicted RBP10.69□□□□□ -0.7
TNRC6B-208ENST00000489500 ARHGAP39Q9C0H5 1083 aa10.69□□□□□ -0.7
TNRC6B-208ENST00000489500 RCAN3Q9UKA8 241 aa10.69□□□□□ -0.7
TNRC6B-208ENST00000489500 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.69□□□□□ -0.7
TNRC6B-208ENST00000489500 LOC285556D6RIA3 1793 aa10.68□□□□□ -0.7
TNRC6B-208ENST00000489500 FLT1P17948 1338 aa10.68□□□□□ -0.7
TNRC6B-208ENST00000489500 ADGRA2Q96PE1 1338 aa10.68□□□□□ -0.7
TNRC6B-208ENST00000489500 USP17L10C9JJH3 530 aa10.68□□□□□ -0.7
TNRC6B-208ENST00000489500 EN2P19622 333 aaPredicted RBP10.68□□□□□ -0.7
TNRC6B-208ENST00000489500 MOGSQ13724 837 aa10.68□□□□□ -0.7
TNRC6B-208ENST00000489500 LAMC2Q13753 1193 aa10.68□□□□□ -0.7
TNRC6B-208ENST00000489500 FAM110CQ1W6H9 321 aa10.68□□□□□ -0.7
TNRC6B-208ENST00000489500 AMOTL1Q8IY63 956 aa10.68□□□□□ -0.7
TNRC6B-208ENST00000489500 TSEN2Q8NCE0 465 aaKnown RBP10.68□□□□□ -0.7
TNRC6B-208ENST00000489500 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.68□□□□□ -0.7
TNRC6B-208ENST00000489500 WDR18Q9BV38 432 aa10.68□□□□□ -0.7
TNRC6B-208ENST00000489500 CRNKL1Q9BZJ0 848 aaKnown RBP10.68□□□□□ -0.7
TNRC6B-208ENST00000489500 CABP5Q9NP86 173 aa10.68□□□□□ -0.7
TNRC6B-208ENST00000489500 PIH1D3Q9NQM4 214 aaKnown RBP10.68□□□□□ -0.7
TNRC6B-208ENST00000489500 PALD1Q9ULE6 856 aa10.68□□□□□ -0.7
TNRC6B-208ENST00000489500 HCN4Q9Y3Q4 1203 aa10.68□□□□□ -0.7
TNRC6B-208ENST00000489500 MYH8P13535 1937 aa10.68□□□□□ -0.7
TNRC6B-208ENST00000489500 ZSWIM8A7E2V4 1837 aa10.68□□□□□ -0.7
TNRC6B-208ENST00000489500 FAM196BA6NMK8 535 aa10.67□□□□□ -0.7
TNRC6B-208ENST00000489500 SFI1A8K8P3 1242 aa10.67□□□□□ -0.7
TNRC6B-208ENST00000489500 DKK1O94907 266 aa10.67□□□□□ -0.7
TNRC6B-208ENST00000489500 POLR3DP05423 398 aaPredicted RBP10.67□□□□□ -0.7
TNRC6B-208ENST00000489500 HMGCS2P54868 508 aa10.67□□□□□ -0.7
TNRC6B-208ENST00000489500 BACE1P56817 501 aa10.67□□□□□ -0.7
TNRC6B-208ENST00000489500 SFSWAPQ12872 951 aaKnown RBP10.67□□□□□ -0.7
TNRC6B-208ENST00000489500 ANKRD13CQ8N6S4 541 aa10.67□□□□□ -0.7
TNRC6B-208ENST00000489500 HTATIP2Q9BUP3 242 aa10.67□□□□□ -0.7
TNRC6B-208ENST00000489500 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.67□□□□□ -0.74e-6■□□□□ 10
TNRC6B-208ENST00000489500 RNF208Q9H0X6 261 aa10.67□□□□□ -0.7
TNRC6B-208ENST00000489500 CWC22Q9HCG8 908 aaKnown RBP10.67□□□□□ -0.7
TNRC6B-208ENST00000489500 NEUROD4Q9HD90 331 aa10.67□□□□□ -0.7
TNRC6B-208ENST00000489500 IL1RAPL2Q9NP60 686 aa10.67□□□□□ -0.7
TNRC6B-208ENST00000489500 SAP30BPQ9UHR5 308 aaKnown RBP10.67□□□□□ -0.7
TNRC6B-208ENST00000489500 PALM3A6NDB9 673 aaPredicted RBP10.66□□□□□ -0.7
TNRC6B-208ENST00000489500 ADCY3O60266 1144 aa10.66□□□□□ -0.7
TNRC6B-208ENST00000489500 USP14P54578 494 aa10.66□□□□□ -0.7
TNRC6B-208ENST00000489500 PSMA6P60900 246 aaKnown RBP10.66□□□□□ -0.7
TNRC6B-208ENST00000489500 PRKCZQ05513 592 aa10.66□□□□□ -0.7
TNRC6B-208ENST00000489500 PDE3AQ14432 1141 aa10.66□□□□□ -0.7
TNRC6B-208ENST00000489500 ZSCAN25Q6NSZ9 544 aa10.66□□□□□ -0.7
TNRC6B-208ENST00000489500 ALYREFQ86V81 257 aaKnown RBP10.66□□□□□ -0.7
TNRC6B-208ENST00000489500 MIGA1Q8NAN2 632 aa10.66□□□□□ -0.7
TNRC6B-208ENST00000489500 FEZ1Q99689 392 aa10.66□□□□□ -0.7
TNRC6B-208ENST00000489500 BCL11AQ9H165 835 aa10.66□□□□□ -0.7
TNRC6B-208ENST00000489500 TLR7Q9NYK1 1049 aaKnown RBP10.66□□□□□ -0.7
TNRC6B-208ENST00000489500 SERPINB13Q9UIV8 391 aa10.66□□□□□ -0.7
TNRC6B-208ENST00000489500 DOCK3Q8IZD9 2030 aa10.66□□□□□ -0.7
TNRC6B-208ENST00000489500 MYH7P12883 1935 aa10.66□□□□□ -0.7
TNRC6B-208ENST00000489500 ADAM23O75077 832 aa10.65□□□□□ -0.7
TNRC6B-208ENST00000489500 GLRX3O76003 335 aaKnown RBP10.65□□□□□ -0.7
TNRC6B-208ENST00000489500 GJB1P08034 283 aa10.65□□□□□ -0.7
TNRC6B-208ENST00000489500 CCL5P13501 91 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms