RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 LAPTM4BQ86VI4 370 aa11.12□□□□□ -0.63
SSBP1-212ENST00000489378 PHOSPHO2Q8TCD6 241 aa11.12□□□□□ -0.63
SSBP1-212ENST00000489378 DYNLL2Q96FJ2 89 aa11.12□□□□□ -0.63
SSBP1-212ENST00000489378 ZNF512BQ96KM6 892 aaPredicted RBP11.12□□□□□ -0.63
SSBP1-212ENST00000489378 TEX13BQ9BXU2 312 aa11.12□□□□□ -0.63
SSBP1-212ENST00000489378 ALDH8A1Q9H2A2 487 aaPredicted RBP11.12□□□□□ -0.63
SSBP1-212ENST00000489378 SH2D4AQ9H788 454 aa11.12□□□□□ -0.63
SSBP1-212ENST00000489378 TRMT13Q9NUP7 481 aaKnown RBP11.12□□□□□ -0.63
SSBP1-212ENST00000489378 LMCD1Q9NZU5 365 aa11.12□□□□□ -0.63
SSBP1-212ENST00000489378 NOB1Q9ULX3 412 aaKnown RBP11.12□□□□□ -0.63
SSBP1-212ENST00000489378 FPGT-TNNI3KV9GXZ4 949 aa11.12□□□□□ -0.63
SSBP1-212ENST00000489378 TECTAO75443 2155 aa11.12□□□□□ -0.63
SSBP1-212ENST00000489378 ZNF536O15090 1300 aa11.12□□□□□ -0.63
SSBP1-212ENST00000489378 GRXCR2A6NFK2 248 aa11.11□□□□□ -0.63
SSBP1-212ENST00000489378 KIF28PB7ZC32 967 aa11.11□□□□□ -0.63
SSBP1-212ENST00000489378 ACTN1P12814 892 aa11.11□□□□□ -0.63
SSBP1-212ENST00000489378 TNFAIP2Q03169 654 aa11.11□□□□□ -0.63
SSBP1-212ENST00000489378 ALDH1L2Q3SY69 923 aa11.11□□□□□ -0.63
SSBP1-212ENST00000489378 TMCO2Q7Z6W1 182 aaPredicted RBP11.11□□□□□ -0.63
SSBP1-212ENST00000489378 TLK2Q86UE8 772 aa11.11□□□□□ -0.63
SSBP1-212ENST00000489378 CCDC144CPQ8IYA2 1237 aa11.11□□□□□ -0.63
SSBP1-212ENST00000489378 PRSS33Q8NF86 280 aa11.11□□□□□ -0.63
SSBP1-212ENST00000489378 ANTXR1Q9H6X2 564 aa11.11□□□□□ -0.63
SSBP1-212ENST00000489378 GNEQ9Y223 722 aaKnown RBP11.11□□□□□ -0.63
SSBP1-212ENST00000489378 EEF2P13639 858 aaKnown RBP11.1□□□□□ -0.63
SSBP1-212ENST00000489378 DDX12PQ92771 950 aa11.1□□□□□ -0.63
SSBP1-212ENST00000489378 NUP88Q99567 741 aaPredicted RBP11.1□□□□□ -0.63
SSBP1-212ENST00000489378 SEZ6LQ9BYH1 1024 aa11.1□□□□□ -0.63
SSBP1-212ENST00000489378 SUGCTQ9HAC7 445 aa11.1□□□□□ -0.63
SSBP1-212ENST00000489378 GPR108Q9NPR9 543 aa11.1□□□□□ -0.63
SSBP1-212ENST00000489378 TLR7Q9NYK1 1049 aaKnown RBP11.1□□□□□ -0.63
SSBP1-212ENST00000489378 DBNLQ9UJU6 430 aaKnown RBP11.1□□□□□ -0.63
SSBP1-212ENST00000489378 MTUS1Q9ULD2 1270 aa11.1□□□□□ -0.63
SSBP1-212ENST00000489378 DDX49Q9Y6V7 483 aaKnown RBP11.1□□□□□ -0.63
SSBP1-212ENST00000489378 TNKSO95271 1327 aa11.1□□□□□ -0.63
SSBP1-212ENST00000489378 MAGEB6P1A0A0J9YX57 407 aa11.09□□□□□ -0.63
SSBP1-212ENST00000489378 DYNC1LI2O43237 492 aaPredicted RBP11.09□□□□□ -0.63
SSBP1-212ENST00000489378 RAD21O60216 631 aa11.09□□□□□ -0.63
SSBP1-212ENST00000489378 SMPD1P17405 629 aa11.09□□□□□ -0.63
SSBP1-212ENST00000489378 CNTN2Q02246 1040 aa11.09□□□□□ -0.63
SSBP1-212ENST00000489378 TMEM63BQ5T3F8 832 aa11.09□□□□□ -0.63
SSBP1-212ENST00000489378 CPXCR1Q8N123 301 aa11.09□□□□□ -0.63
SSBP1-212ENST00000489378 ANKK1Q8NFD2 765 aa11.09□□□□□ -0.63
SSBP1-212ENST00000489378 SDR42E1Q8WUS8 393 aa11.09□□□□□ -0.63
SSBP1-212ENST00000489378 SLF1Q9BQI6 1058 aa11.09□□□□□ -0.63
SSBP1-212ENST00000489378 AP5M1Q9H0R1 490 aa11.09□□□□□ -0.63
SSBP1-212ENST00000489378 SWAP70Q9UH65 585 aa11.09□□□□□ -0.63
SSBP1-212ENST00000489378 SOWAHBA6NEL2 793 aa11.09□□□□□ -0.63
SSBP1-212ENST00000489378 TRIM6-TRIM34B2RNG4 842 aa11.09□□□□□ -0.63
SSBP1-212ENST00000489378 H3BQ06 376 aaPredicted RBP11.09□□□□□ -0.63
SSBP1-212ENST00000489378 GNAI3P08754 354 aa11.09□□□□□ -0.63
SSBP1-212ENST00000489378 FOXK2Q01167 660 aa11.09□□□□□ -0.63
SSBP1-212ENST00000489378 ZP2Q05996 745 aa11.09□□□□□ -0.63
SSBP1-212ENST00000489378 ANKRD35Q8N283 1001 aa11.09□□□□□ -0.63
SSBP1-212ENST00000489378 ZFRQ96KR1 1074 aaKnown RBP11.09□□□□□ -0.63
SSBP1-212ENST00000489378 MFSD14AQ96MC6 490 aa11.09□□□□□ -0.63
SSBP1-212ENST00000489378 CRNKL1Q9BZJ0 848 aaKnown RBP11.09□□□□□ -0.63
SSBP1-212ENST00000489378 API5Q9BZZ5 524 aaKnown RBP11.09□□□□□ -0.63
SSBP1-212ENST00000489378 FTOQ9C0B1 505 aaKnown RBP eCLIP11.09□□□□□ -0.63
SSBP1-212ENST00000489378 DCP1AQ9NPI6 582 aaPredicted RBP11.09□□□□□ -0.63
SSBP1-212ENST00000489378 C5orf42Q9H799 3197 aa11.08□□□□□ -0.63
SSBP1-212ENST00000489378 RIF1Q5UIP0 2472 aaKnown RBP11.08□□□□□ -0.64
SSBP1-212ENST00000489378 MYO7AQ13402 2215 aa11.08□□□□□ -0.64
SSBP1-212ENST00000489378 TANC1Q9C0D5 1861 aa11.08□□□□□ -0.64
SSBP1-212ENST00000489378 RBAK-RBAKDNI3L0D1 243 aa11.08□□□□□ -0.64
SSBP1-212ENST00000489378 ZEB2O60315 1214 aa11.08□□□□□ -0.64
SSBP1-212ENST00000489378 RGS20O76081 388 aa11.08□□□□□ -0.64
SSBP1-212ENST00000489378 IQCF3P0C7M6 154 aa11.08□□□□□ -0.64
SSBP1-212ENST00000489378 SUPT20HL2P0C7V6 817 aa11.08□□□□□ -0.64
SSBP1-212ENST00000489378 RFC2P35250 354 aa11.08□□□□□ -0.64
SSBP1-212ENST00000489378 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.08□□□□□ -0.64
SSBP1-212ENST00000489378 NEK9Q8TD19 979 aa11.08□□□□□ -0.64
SSBP1-212ENST00000489378 PPP1R13LQ8WUF5 828 aa11.08□□□□□ -0.64
SSBP1-212ENST00000489378 RAVER2Q9HCJ3 691 aaKnown RBP11.08□□□□□ -0.64
SSBP1-212ENST00000489378 GOPCQ9HD26 462 aa11.08□□□□□ -0.64
SSBP1-212ENST00000489378 PDGFCQ9NRA1 345 aa11.08□□□□□ -0.64
SSBP1-212ENST00000489378 SIP14410 1827 aa11.07□□□□□ -0.64
SSBP1-212ENST00000489378 BAZ2AQ9UIF9 1905 aaKnown RBP11.07□□□□□ -0.64
SSBP1-212ENST00000489378 CYP2D7A0A087X1C5 515 aa11.07□□□□□ -0.64
SSBP1-212ENST00000489378 ATP2A1O14983 1001 aa11.07□□□□□ -0.64
SSBP1-212ENST00000489378 CDK8P49336 464 aa11.07□□□□□ -0.64
SSBP1-212ENST00000489378 ERVK-21P61565 698 aa11.07□□□□□ -0.64
SSBP1-212ENST00000489378 PUS10Q3MIT2 529 aaKnown RBP11.07□□□□□ -0.64
SSBP1-212ENST00000489378 FAM133AQ8N9E0 248 aa11.07□□□□□ -0.64
SSBP1-212ENST00000489378 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.07□□□□□ -0.64
SSBP1-212ENST00000489378 CCDC17Q96LX7 622 aa11.07□□□□□ -0.64
SSBP1-212ENST00000489378 CCDC8Q9H0W5 538 aaPredicted RBP11.07□□□□□ -0.64
SSBP1-212ENST00000489378 KANSL2Q9H9L4 492 aa11.07□□□□□ -0.64
SSBP1-212ENST00000489378 TRIP12Q14669 1992 aaPredicted RBP11.07□□□□□ -0.64
SSBP1-212ENST00000489378 LINC01553A4QN01 128 aa11.06□□□□□ -0.64
SSBP1-212ENST00000489378 GFRA3O60609 400 aa11.06□□□□□ -0.64
SSBP1-212ENST00000489378 BAIAP3O94812 1187 aa11.06□□□□□ -0.64
SSBP1-212ENST00000489378 IRS1P35568 1242 aa11.06□□□□□ -0.64
SSBP1-212ENST00000489378 KCNJ6P48051 423 aa11.06□□□□□ -0.64
SSBP1-212ENST00000489378 WDR5P61964 334 aaKnown RBP11.06□□□□□ -0.64
SSBP1-212ENST00000489378 DEFB103AP81534 67 aa11.06□□□□□ -0.64
SSBP1-212ENST00000489378 TCF15Q12870 199 aa11.06□□□□□ -0.64
SSBP1-212ENST00000489378 EEPD1Q7L9B9 569 aa11.06□□□□□ -0.64
SSBP1-212ENST00000489378 LCORLQ8N3X6 602 aa11.06□□□□□ -0.64
SSBP1-212ENST00000489378 TGS1Q96RS0 853 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms