RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, human

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN18-213	ENST00000489215	CST5	P28325	142 aa	Predicted RBP	27.87	■■■□□ 2.05
PTPN18-213	ENST00000489215	ADCYAP1R1	P41586	468 aa		27.87	■■■□□ 2.05
PTPN18-213	ENST00000489215	GJA9	P57773	515 aa		27.87	■■■□□ 2.05
PTPN18-213	ENST00000489215	LRRC26	Q2I0M4	334 aa		27.87	■■■□□ 2.05
PTPN18-213	ENST00000489215	C1orf53	Q5VUE5	145 aa		27.87	■■■□□ 2.05
PTPN18-213	ENST00000489215	SLC30A10	Q6XR72	485 aa		27.87	■■■□□ 2.05
PTPN18-213	ENST00000489215	SLC39A5	Q6ZMH5	540 aa		27.87	■■■□□ 2.05
PTPN18-213	ENST00000489215	SYNE3	Q6ZMZ3	975 aa		27.87	■■■□□ 2.05
PTPN18-213	ENST00000489215	SENP2	Q9HC62	589 aa		27.87	■■■□□ 2.05
PTPN18-213	ENST00000489215	NOL8	Q76FK4	1167 aa	Known RBP	27.86	■■■□□ 2.05
PTPN18-213	ENST00000489215	KLHDC9	Q8NEP7	349 aa		27.86	■■■□□ 2.05
PTPN18-213	ENST00000489215	UPF3A	Q9H1J1	476 aa	Known RBP	27.86	■■■□□ 2.05
PTPN18-213	ENST00000489215	PCDHA1	Q9Y5I3	950 aa		27.86	■■■□□ 2.05
PTPN18-213	ENST00000489215	SLC12A7	Q9Y666	1083 aa		27.86	■■■□□ 2.05
PTPN18-213	ENST00000489215	CEP290	O15078	2479 aa		27.86	■■■□□ 2.05
PTPN18-213	ENST00000489215	ASTN1	O14525	1302 aa		27.86	■■■□□ 2.05
PTPN18-213	ENST00000489215	LCT	P09848	1927 aa		27.85	■■■□□ 2.05
PTPN18-213	ENST00000489215	PNMA6F	A0A0J9YX94	578 aa		27.85	■■■□□ 2.05
PTPN18-213	ENST00000489215	C6orf222	P0C671	652 aa	Predicted RBP	27.85	■■■□□ 2.05
PTPN18-213	ENST00000489215	NKX3-2	P78367	333 aa		27.85	■■■□□ 2.05
PTPN18-213	ENST00000489215	PDE4D	Q08499	809 aa		27.85	■■■□□ 2.05
PTPN18-213	ENST00000489215	DHX32	Q7L7V1	743 aa	Known RBP	27.85	■■■□□ 2.05
PTPN18-213	ENST00000489215	ATN1	P54259	1190 aa	Predicted RBP	27.84	■■■□□ 2.05
PTPN18-213	ENST00000489215	SGMS1	Q86VZ5	419 aa		27.84	■■■□□ 2.05
PTPN18-213	ENST00000489215	NSUN6	Q8TEA1	469 aa	Known RBP	27.84	■■■□□ 2.05
PTPN18-213	ENST00000489215	SPZ1	Q9BXG8	430 aa		27.84	■■■□□ 2.05
PTPN18-213	ENST00000489215	AP5M1	Q9H0R1	490 aa		27.84	■■■□□ 2.05
PTPN18-213	ENST00000489215	ACLY	P53396	1101 aa		27.83	■■■□□ 2.05
PTPN18-213	ENST00000489215	SNX17	Q15036	470 aa		27.83	■■■□□ 2.05
PTPN18-213	ENST00000489215	TAPT1	Q6NXT6	567 aa		27.83	■■■□□ 2.05
PTPN18-213	ENST00000489215	HOMER1	Q86YM7	354 aa		27.83	■■■□□ 2.05
PTPN18-213	ENST00000489215	PURB	Q96QR8	312 aa	Known RBP	27.83	■■■□□ 2.05
PTPN18-213	ENST00000489215	PIGS	Q96S52	555 aa		27.83	■■■□□ 2.05
PTPN18-213	ENST00000489215	IWS1	Q96ST2	819 aa		27.83	■■■□□ 2.05
PTPN18-213	ENST00000489215	PRKAG2	Q9UGJ0	569 aa		27.83	■■■□□ 2.05
PTPN18-213	ENST00000489215	COLQ	Q9Y215	455 aa	Predicted RBP	27.83	■■■□□ 2.05
PTPN18-213	ENST00000489215	ZEB2	O60315	1214 aa		27.82	■■■□□ 2.04
PTPN18-213	ENST00000489215	EDNRB	P24530	442 aa		27.82	■■■□□ 2.04
PTPN18-213	ENST00000489215	RTP1	P59025	263 aa		27.82	■■■□□ 2.04
PTPN18-213	ENST00000489215	GHRHR	Q02643	423 aa		27.82	■■■□□ 2.04
PTPN18-213	ENST00000489215	KCNA10	Q16322	511 aa		27.82	■■■□□ 2.04
PTPN18-213	ENST00000489215	GNAS	Q5JWF2	1037 aa		27.82	■■■□□ 2.04
PTPN18-213	ENST00000489215	CHRDL2	Q6WN34	429 aa		27.82	■■■□□ 2.04
PTPN18-213	ENST00000489215	EEPD1	Q7L9B9	569 aa		27.82	■■■□□ 2.04
PTPN18-213	ENST00000489215	SYTL5	Q8TDW5	730 aa	Predicted RBP	27.82	■■■□□ 2.04
PTPN18-213	ENST00000489215	FERMT2	Q96AC1	680 aa		27.82	■■■□□ 2.04
PTPN18-213	ENST00000489215	LENG1	Q96BZ8	264 aa	Predicted RBP	27.82	■■■□□ 2.04
PTPN18-213	ENST00000489215	RRP36	Q96EU6	259 aa	Known RBP	27.82	■■■□□ 2.04
PTPN18-213	ENST00000489215	GLT1D1	Q96MS3	346 aa		27.82	■■■□□ 2.04
PTPN18-213	ENST00000489215	GNE	Q9Y223	722 aa	Known RBP	27.82	■■■□□ 2.04
PTPN18-213	ENST00000489215		A0A1W2PQ45	241 aa	Predicted RBP	27.81	■■■□□ 2.04
PTPN18-213	ENST00000489215		A0A1W2PQY0	241 aa		27.81	■■■□□ 2.04
PTPN18-213	ENST00000489215	CFB	P00751	764 aa		27.81	■■■□□ 2.04
PTPN18-213	ENST00000489215	HABP4	Q5JVS0	413 aa	Known RBP	27.81	■■■□□ 2.04
PTPN18-213	ENST00000489215	CCSAP	Q6IQ19	270 aa	Predicted RBP	27.81	■■■□□ 2.04
PTPN18-213	ENST00000489215	FBXO16	Q8IX29	292 aa	Predicted RBP	27.81	■■■□□ 2.04
PTPN18-213	ENST00000489215	KCNB2	Q92953	911 aa		27.81	■■■□□ 2.04
PTPN18-213	ENST00000489215	SEC63	Q9UGP8	760 aa	Known RBP	27.81	■■■□□ 2.04
PTPN18-213	ENST00000489215	ELP1	O95163	1332 aa		27.81	■■■□□ 2.04
PTPN18-213	ENST00000489215		A0A1W2PPC1	479 aa		27.8	■■■□□ 2.04
PTPN18-213	ENST00000489215	RBM47	A0AV96	593 aa	Known RBP	27.8	■■■□□ 2.04
PTPN18-213	ENST00000489215	NKRF	O15226	690 aa	Known RBP eCLIP	27.8	■■■□□ 2.04	2e-7	■□□□□ 9.5
PTPN18-213	ENST00000489215	CYTH3	O43739	400 aa		27.8	■■■□□ 2.04
PTPN18-213	ENST00000489215	HSPA4	P34932	840 aa		27.8	■■■□□ 2.04
PTPN18-213	ENST00000489215	EXOSC10	Q01780	885 aa	Known RBP	27.8	■■■□□ 2.04
PTPN18-213	ENST00000489215	DUSP28	Q4G0W2	176 aa		27.8	■■■□□ 2.04
PTPN18-213	ENST00000489215	TLK2	Q86UE8	772 aa		27.8	■■■□□ 2.04
PTPN18-213	ENST00000489215	RASEF	Q8IZ41	740 aa		27.8	■■■□□ 2.04
PTPN18-213	ENST00000489215	SCFD2	Q8WU76	684 aa		27.8	■■■□□ 2.04
PTPN18-213	ENST00000489215	RMDN3	Q96TC7	470 aa		27.8	■■■□□ 2.04
PTPN18-213	ENST00000489215	GPHN	Q9NQX3	736 aa	Predicted RBP	27.8	■■■□□ 2.04
PTPN18-213	ENST00000489215	STARD7	Q9NQZ5	370 aa		27.8	■■■□□ 2.04
PTPN18-213	ENST00000489215	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	27.8	■■■□□ 2.04
PTPN18-213	ENST00000489215	ATP11B	Q9Y2G3	1177 aa		27.8	■■■□□ 2.04
PTPN18-213	ENST00000489215	LRRC37A2	A6NM11	1700 aa		27.79	■■■□□ 2.04
PTPN18-213	ENST00000489215	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	27.79	■■■□□ 2.04
PTPN18-213	ENST00000489215	ADCY6	O43306	1168 aa		27.79	■■■□□ 2.04
PTPN18-213	ENST00000489215	CABYR	O75952	493 aa		27.79	■■■□□ 2.04
PTPN18-213	ENST00000489215	SMPD1	P17405	629 aa		27.79	■■■□□ 2.04
PTPN18-213	ENST00000489215	HSD17B4	P51659	736 aa		27.79	■■■□□ 2.04
PTPN18-213	ENST00000489215	ARHGEF16	Q5VV41	709 aa		27.79	■■■□□ 2.04
PTPN18-213	ENST00000489215	FANCB	Q8NB91	859 aa		27.79	■■■□□ 2.04
PTPN18-213	ENST00000489215	TBC1D5	Q92609	795 aa		27.79	■■■□□ 2.04
PTPN18-213	ENST00000489215	WDR11	Q9BZH6	1224 aa		27.79	■■■□□ 2.04
PTPN18-213	ENST00000489215	PDGFC	Q9NRA1	345 aa		27.79	■■■□□ 2.04
PTPN18-213	ENST00000489215	BAZ2B	Q9UIF8	2168 aa	Known RBP	27.79	■■■□□ 2.04
PTPN18-213	ENST00000489215	ASGR1	P07306	291 aa		27.78	■■■□□ 2.04
PTPN18-213	ENST00000489215	BMP8B	P34820	402 aa		27.78	■■■□□ 2.04
PTPN18-213	ENST00000489215	STXBP2	Q15833	593 aa		27.78	■■■□□ 2.04
PTPN18-213	ENST00000489215	TAAR1	Q96RJ0	339 aa		27.78	■■■□□ 2.04
PTPN18-213	ENST00000489215	MYL10	Q9BUA6	226 aa		27.78	■■■□□ 2.04
PTPN18-213	ENST00000489215	SEZ6L	Q9BYH1	1024 aa		27.78	■■■□□ 2.04
PTPN18-213	ENST00000489215	RBM28	Q9NW13	759 aa	Known RBP	27.78	■■■□□ 2.04
PTPN18-213	ENST00000489215	MROH7	Q68CQ1	1323 aa		27.77	■■■□□ 2.04
PTPN18-213	ENST00000489215	DYNC1LI2	O43237	492 aa	Predicted RBP	27.77	■■■□□ 2.04
PTPN18-213	ENST00000489215	PPP1R11	O60927	126 aa	Predicted RBP	27.77	■■■□□ 2.04
PTPN18-213	ENST00000489215	PSMA5	P28066	241 aa		27.77	■■■□□ 2.04
PTPN18-213	ENST00000489215	FGD1	P98174	961 aa		27.77	■■■□□ 2.04
PTPN18-213	ENST00000489215	BRDT	Q58F21	947 aa	Predicted RBP	27.77	■■■□□ 2.04
PTPN18-213	ENST00000489215	LRRC2	Q9BYS8	371 aa		27.77	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms