RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 MTMR8Q96EF0 704 aa16.56■□□□□ 0.24
BRCA1-218ENST00000489037 RRP36Q96EU6 259 aaKnown RBP16.56■□□□□ 0.24
BRCA1-218ENST00000489037 PIGSQ96S52 555 aa16.56■□□□□ 0.24
BRCA1-218ENST00000489037 MYL10Q9BUA6 226 aa16.56■□□□□ 0.24
BRCA1-218ENST00000489037 VTA1Q9NP79 307 aa16.56■□□□□ 0.24
BRCA1-218ENST00000489037 SEC63Q9UGP8 760 aaKnown RBP16.56■□□□□ 0.24
BRCA1-218ENST00000489037 EIF5BO60841 1220 aaKnown RBP16.55■□□□□ 0.24
BRCA1-218ENST00000489037 PGK1P00558 417 aa16.55■□□□□ 0.24
BRCA1-218ENST00000489037 CFBP00751 764 aa16.55■□□□□ 0.24
BRCA1-218ENST00000489037 TNFAIP2Q03169 654 aa16.55■□□□□ 0.24
BRCA1-218ENST00000489037 ADCK5Q3MIX3 580 aa16.55■□□□□ 0.24
BRCA1-218ENST00000489037 IQSEC1Q6DN90 963 aa16.55■□□□□ 0.24
BRCA1-218ENST00000489037 BLOC1S2Q6QNY1 142 aa16.55■□□□□ 0.24
BRCA1-218ENST00000489037 EEPD1Q7L9B9 569 aa16.55■□□□□ 0.24
BRCA1-218ENST00000489037 SGMS1Q86VZ5 419 aa16.55■□□□□ 0.24
BRCA1-218ENST00000489037 SAMD3Q8N6K7 520 aa16.55■□□□□ 0.24
BRCA1-218ENST00000489037 KCNB2Q92953 911 aa16.55■□□□□ 0.24
BRCA1-218ENST00000489037 JAKMIP1Q96N16 626 aaKnown RBP16.55■□□□□ 0.24
BRCA1-218ENST00000489037 PURBQ96QR8 312 aaKnown RBP16.55■□□□□ 0.24
BRCA1-218ENST00000489037 SPZ1Q9BXG8 430 aa16.55■□□□□ 0.24
BRCA1-218ENST00000489037 MAP3K20Q9NYL2 800 aaKnown RBP16.55■□□□□ 0.24
BRCA1-218ENST00000489037 MKI67P46013 3256 aaKnown RBP16.55■□□□□ 0.24
BRCA1-218ENST00000489037 H0YGN5 161 aa16.54■□□□□ 0.24
BRCA1-218ENST00000489037 EXOSC10Q01780 885 aaKnown RBP16.54■□□□□ 0.24
BRCA1-218ENST00000489037 MICU3Q86XE3 530 aa16.54■□□□□ 0.24
BRCA1-218ENST00000489037 C7orf61Q8IZ16 206 aa16.54■□□□□ 0.24
BRCA1-218ENST00000489037 FANCBQ8NB91 859 aa16.54■□□□□ 0.24
BRCA1-218ENST00000489037 MORC4Q8TE76 937 aa16.54■□□□□ 0.24
BRCA1-218ENST00000489037 PIBF1Q8WXW3 757 aa16.54■□□□□ 0.24
BRCA1-218ENST00000489037 TSEN34Q9BSV6 310 aaKnown RBP16.54■□□□□ 0.24
BRCA1-218ENST00000489037 AP5M1Q9H0R1 490 aa16.54■□□□□ 0.24
BRCA1-218ENST00000489037 NAP1L2Q9ULW6 460 aaPredicted RBP16.54■□□□□ 0.24
BRCA1-218ENST00000489037 SNX14Q9Y5W7 946 aa16.54■□□□□ 0.24
BRCA1-218ENST00000489037 SYNRGQ9UMZ2 1314 aa16.53■□□□□ 0.24
BRCA1-218ENST00000489037 ZBTB43O43298 467 aa16.53■□□□□ 0.24
BRCA1-218ENST00000489037 CYTH3O43739 400 aa16.53■□□□□ 0.24
BRCA1-218ENST00000489037 C6orf222P0C671 652 aaPredicted RBP16.53■□□□□ 0.24
BRCA1-218ENST00000489037 RXRAP19793 462 aa16.53■□□□□ 0.24
BRCA1-218ENST00000489037 ADCYAP1R1P41586 468 aa16.53■□□□□ 0.24
BRCA1-218ENST00000489037 FBXO16Q8IX29 292 aaPredicted RBP16.53■□□□□ 0.24
BRCA1-218ENST00000489037 PCSK9Q8NBP7 692 aaKnown RBP16.53■□□□□ 0.24
BRCA1-218ENST00000489037 SYTL5Q8TDW5 730 aaPredicted RBP16.53■□□□□ 0.24
BRCA1-218ENST00000489037 NSUN6Q8TEA1 469 aaKnown RBP16.53■□□□□ 0.24
BRCA1-218ENST00000489037 LENG1Q96BZ8 264 aaPredicted RBP16.53■□□□□ 0.24
BRCA1-218ENST00000489037 TCEANC2Q96MN5 208 aa16.53■□□□□ 0.24
BRCA1-218ENST00000489037 KATNBL1Q9H079 304 aa16.53■□□□□ 0.24
BRCA1-218ENST00000489037 RBM28Q9NW13 759 aaKnown RBP16.53■□□□□ 0.24
BRCA1-218ENST00000489037 ASTN1O14525 1302 aa16.52■□□□□ 0.24
BRCA1-218ENST00000489037 ADAMTS4O75173 837 aa16.52■□□□□ 0.24
BRCA1-218ENST00000489037 ATN1P54259 1190 aaPredicted RBP16.52■□□□□ 0.24
BRCA1-218ENST00000489037 ARHGEF16Q5VV41 709 aa16.52■□□□□ 0.24
BRCA1-218ENST00000489037 APOA5Q6Q788 366 aa16.52■□□□□ 0.24
BRCA1-218ENST00000489037 RAB11FIP4Q86YS3 637 aa16.52■□□□□ 0.24
BRCA1-218ENST00000489037 TBC1D5Q92609 795 aa16.52■□□□□ 0.24
BRCA1-218ENST00000489037 FERMT2Q96AC1 680 aa16.52■□□□□ 0.24
BRCA1-218ENST00000489037 IWS1Q96ST2 819 aa16.52■□□□□ 0.24
BRCA1-218ENST00000489037 RMDN3Q96TC7 470 aa16.52■□□□□ 0.24
BRCA1-218ENST00000489037 PHF24Q9UPV7 400 aa16.52■□□□□ 0.24
BRCA1-218ENST00000489037 LRRC37A2A6NM11 1700 aa16.51■□□□□ 0.23
BRCA1-218ENST00000489037 KLF18A0A0U1RQI7 1052 aa16.51■□□□□ 0.23
BRCA1-218ENST00000489037 MOXD2PA6NHM9 499 aa16.51■□□□□ 0.23
BRCA1-218ENST00000489037 GCOM1H8Y6P7 765 aaPredicted RBP16.51■□□□□ 0.23
BRCA1-218ENST00000489037 ZEB2O60315 1214 aa16.51■□□□□ 0.23
BRCA1-218ENST00000489037 PPP1R11O60927 126 aaPredicted RBP16.51■□□□□ 0.23
BRCA1-218ENST00000489037 POLR2MP0CAP2 368 aa16.51■□□□□ 0.23
BRCA1-218ENST00000489037 CASTP20810 708 aaKnown RBP16.51■□□□□ 0.23
BRCA1-218ENST00000489037 GJA9P57773 515 aa16.51■□□□□ 0.23
BRCA1-218ENST00000489037 COL9A3Q14050 684 aaPredicted RBP16.51■□□□□ 0.23
BRCA1-218ENST00000489037 RTN1Q16799 776 aa16.51■□□□□ 0.23
BRCA1-218ENST00000489037 LRRC26Q2I0M4 334 aa16.51■□□□□ 0.23
BRCA1-218ENST00000489037 GNASQ5JWF2 1037 aa16.51■□□□□ 0.23
BRCA1-218ENST00000489037 TAPT1Q6NXT6 567 aa16.51■□□□□ 0.23
BRCA1-218ENST00000489037 SLC39A5Q6ZMH5 540 aa16.51■□□□□ 0.23
BRCA1-218ENST00000489037 SRBD1Q8N5C6 995 aaKnown RBP16.51■□□□□ 0.23
BRCA1-218ENST00000489037 TAAR1Q96RJ0 339 aa16.51■□□□□ 0.23
BRCA1-218ENST00000489037 USP26Q9BXU7 913 aa16.51■□□□□ 0.23
BRCA1-218ENST00000489037 UPF3AQ9H1J1 476 aaKnown RBP16.51■□□□□ 0.23
BRCA1-218ENST00000489037 PDGFCQ9NRA1 345 aa16.51■□□□□ 0.23
BRCA1-218ENST00000489037 Q9Y3F1 56 aa16.51■□□□□ 0.23
BRCA1-218ENST00000489037 KIAA1217Q5T5P2 1943 aa16.51■□□□□ 0.23
BRCA1-218ENST00000489037 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.5■□□□□ 0.23
BRCA1-218ENST00000489037 DYNC1LI2O43237 492 aaPredicted RBP16.5■□□□□ 0.23
BRCA1-218ENST00000489037 PLEKHA8P1O95397 391 aa16.5■□□□□ 0.23
BRCA1-218ENST00000489037 CST5P28325 142 aaPredicted RBP16.5■□□□□ 0.23
BRCA1-218ENST00000489037 HSD17B4P51659 736 aa16.5■□□□□ 0.23
BRCA1-218ENST00000489037 ACLYP53396 1101 aa16.5■□□□□ 0.23
BRCA1-218ENST00000489037 PPP2R5BQ15173 497 aa16.5■□□□□ 0.23
BRCA1-218ENST00000489037 STXBP2Q15833 593 aa16.5■□□□□ 0.23
BRCA1-218ENST00000489037 KCNA10Q16322 511 aa16.5■□□□□ 0.23
BRCA1-218ENST00000489037 SLC35G1Q2M3R5 365 aa16.5■□□□□ 0.23
BRCA1-218ENST00000489037 Q6ZUG5 572 aa16.5■□□□□ 0.23
BRCA1-218ENST00000489037 TMTC3Q6ZXV5 915 aa16.5■□□□□ 0.23
BRCA1-218ENST00000489037 TLK2Q86UE8 772 aa16.5■□□□□ 0.23
BRCA1-218ENST00000489037 CCDC82Q8N4S0 544 aa16.5■□□□□ 0.23
BRCA1-218ENST00000489037 KLHDC9Q8NEP7 349 aa16.5■□□□□ 0.23
BRCA1-218ENST00000489037 SCFD2Q8WU76 684 aa16.5■□□□□ 0.23
BRCA1-218ENST00000489037 CUL5Q93034 780 aa16.5■□□□□ 0.23
BRCA1-218ENST00000489037 VTI1AQ96AJ9 217 aa16.5■□□□□ 0.23
BRCA1-218ENST00000489037 GLT1D1Q96MS3 346 aa16.5■□□□□ 0.23
BRCA1-218ENST00000489037 WDR11Q9BZH6 1224 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms