RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 FSD1Q9BTV5 496 aa12.76□□□□□ -0.37
YIPF3-207ENST00000488966 PCDHA11Q9Y5I1 949 aa12.76□□□□□ -0.37
YIPF3-207ENST00000488966 RFXAPO00287 272 aa12.75□□□□□ -0.37
YIPF3-207ENST00000488966 NFIBO00712 420 aa12.75□□□□□ -0.37
YIPF3-207ENST00000488966 RANBP6O60518 1105 aaKnown RBP12.75□□□□□ -0.37
YIPF3-207ENST00000488966 TNKSO95271 1327 aa12.75□□□□□ -0.37
YIPF3-207ENST00000488966 BMP1P13497 986 aa12.75□□□□□ -0.37
YIPF3-207ENST00000488966 SLC16A2P36021 539 aa12.75□□□□□ -0.37
YIPF3-207ENST00000488966 NOVP48745 357 aa12.75□□□□□ -0.37
YIPF3-207ENST00000488966 PURAQ00577 322 aaKnown RBP12.75□□□□□ -0.37
YIPF3-207ENST00000488966 TFF2Q03403 129 aa12.75□□□□□ -0.37
YIPF3-207ENST00000488966 CCDC96Q2M329 555 aa12.75□□□□□ -0.37
YIPF3-207ENST00000488966 PPP4R3BQ5MIZ7 849 aa12.75□□□□□ -0.37
YIPF3-207ENST00000488966 TTC41PQ6P2S7 1318 aa12.75□□□□□ -0.37
YIPF3-207ENST00000488966 DEFB128Q7Z7B8 93 aa12.75□□□□□ -0.37
YIPF3-207ENST00000488966 IL27Q8NEV9 243 aa12.75□□□□□ -0.37
YIPF3-207ENST00000488966 PPP1R13LQ8WUF5 828 aa12.75□□□□□ -0.37
YIPF3-207ENST00000488966 WDR11Q9BZH6 1224 aa12.75□□□□□ -0.37
YIPF3-207ENST00000488966 RANBP17Q9H2T7 1088 aaKnown RBP12.75□□□□□ -0.37
YIPF3-207ENST00000488966 MYH4Q9Y623 1939 aa12.75□□□□□ -0.37
YIPF3-207ENST00000488966 RBM47A0AV96 593 aaKnown RBP12.74□□□□□ -0.37
YIPF3-207ENST00000488966 ERC2O15083 957 aa12.74□□□□□ -0.37
YIPF3-207ENST00000488966 CA3P07451 260 aa12.74□□□□□ -0.37
YIPF3-207ENST00000488966 MYL3P08590 195 aa12.74□□□□□ -0.37
YIPF3-207ENST00000488966 SUPT20HL2P0C7V6 817 aa12.74□□□□□ -0.37
YIPF3-207ENST00000488966 ALDH5A1P51649 535 aaPredicted RBP12.74□□□□□ -0.37
YIPF3-207ENST00000488966 VPS53Q5VIR6 699 aa12.74□□□□□ -0.37
YIPF3-207ENST00000488966 DCAF4Q8WV16 495 aa12.74□□□□□ -0.37
YIPF3-207ENST00000488966 MTG1Q9BT17 334 aaPredicted RBP12.74□□□□□ -0.37
YIPF3-207ENST00000488966 TSPYL2Q9H2G4 693 aaPredicted RBP12.74□□□□□ -0.37
YIPF3-207ENST00000488966 POLR3EQ9NVU0 708 aa12.74□□□□□ -0.37
YIPF3-207ENST00000488966 ADD3Q9UEY8 706 aaKnown RBP12.74□□□□□ -0.37
YIPF3-207ENST00000488966 LRRC37A2A6NM11 1700 aa12.74□□□□□ -0.37
YIPF3-207ENST00000488966 CHD9Q3L8U1 2897 aa12.73□□□□□ -0.37
YIPF3-207ENST00000488966 PTPDC1A2A3K4 754 aa12.73□□□□□ -0.37
YIPF3-207ENST00000488966 PFKMP08237 780 aa12.73□□□□□ -0.37
YIPF3-207ENST00000488966 CALML3P27482 149 aa12.73□□□□□ -0.37
YIPF3-207ENST00000488966 CPT1AP50416 773 aa12.73□□□□□ -0.37
YIPF3-207ENST00000488966 KCNQ1P51787 676 aa12.73□□□□□ -0.37
YIPF3-207ENST00000488966 FAM47CQ5HY64 1035 aa12.73□□□□□ -0.37
YIPF3-207ENST00000488966 TMEM67Q5HYA8 995 aa12.73□□□□□ -0.37
YIPF3-207ENST00000488966 SYDE2Q5VT97 1194 aa12.73□□□□□ -0.37
YIPF3-207ENST00000488966 DIEXFQ68CQ4 756 aaKnown RBP12.73□□□□□ -0.37
YIPF3-207ENST00000488966 BTNL9Q6UXG8 535 aa12.73□□□□□ -0.37
YIPF3-207ENST00000488966 OR6J1Q8NGC5 347 aa12.73□□□□□ -0.37
YIPF3-207ENST00000488966 CLEC4DQ8WXI8 215 aa12.73□□□□□ -0.37
YIPF3-207ENST00000488966 CERS4Q9HA82 394 aa12.73□□□□□ -0.37
YIPF3-207ENST00000488966 ANAPC4Q9UJX5 808 aa12.73□□□□□ -0.37
YIPF3-207ENST00000488966 FRMPD2Q68DX3 1309 aaPredicted RBP12.72□□□□□ -0.37
YIPF3-207ENST00000488966 EPOPA6NHQ4 379 aa12.72□□□□□ -0.37
YIPF3-207ENST00000488966 ORC4O43929 436 aa12.72□□□□□ -0.37
YIPF3-207ENST00000488966 ARHGEF15O94989 841 aa12.72□□□□□ -0.37
YIPF3-207ENST00000488966 FGRP09769 529 aa12.72□□□□□ -0.37
YIPF3-207ENST00000488966 SKIV2LQ15477 1246 aaKnown RBP12.72□□□□□ -0.37
YIPF3-207ENST00000488966 NBPF20Q3BBV1 942 aa12.72□□□□□ -0.37
YIPF3-207ENST00000488966 KRT40Q6A162 431 aa12.72□□□□□ -0.37
YIPF3-207ENST00000488966 SLC30A10Q6XR72 485 aa12.72□□□□□ -0.37
YIPF3-207ENST00000488966 TMEM47Q9BQJ4 181 aa12.72□□□□□ -0.37
YIPF3-207ENST00000488966 GPCPD1Q9NPB8 672 aa12.72□□□□□ -0.37
YIPF3-207ENST00000488966 GPHNQ9NQX3 736 aaPredicted RBP12.72□□□□□ -0.37
YIPF3-207ENST00000488966 PCDHB15Q9Y5E8 787 aa12.72□□□□□ -0.37
YIPF3-207ENST00000488966 MTCH2Q9Y6C9 303 aa12.72□□□□□ -0.37
YIPF3-207ENST00000488966 LOC102724159A0A0B4J2E5 919 aa12.71□□□□□ -0.37
YIPF3-207ENST00000488966 IQCF3P0C7M6 154 aa12.71□□□□□ -0.37
YIPF3-207ENST00000488966 TOP1P11387 765 aaKnown RBP12.71□□□□□ -0.37
YIPF3-207ENST00000488966 ACTN1P12814 892 aa12.71□□□□□ -0.37
YIPF3-207ENST00000488966 POU3F3P20264 500 aaPredicted RBP12.71□□□□□ -0.37
YIPF3-207ENST00000488966 TAP1Q03518 808 aa12.71□□□□□ -0.37
YIPF3-207ENST00000488966 PWP2Q15269 919 aaKnown RBP12.71□□□□□ -0.37
YIPF3-207ENST00000488966 RNF207Q6ZRF8 634 aa12.71□□□□□ -0.37
YIPF3-207ENST00000488966 COPS5Q92905 334 aa12.71□□□□□ -0.37
YIPF3-207ENST00000488966 MYO9BQ13459 2157 aa12.71□□□□□ -0.37
YIPF3-207ENST00000488966 A6NJR5 290 aa12.7□□□□□ -0.38
YIPF3-207ENST00000488966 GTPBP6O43824 516 aaPredicted RBP12.7□□□□□ -0.38
YIPF3-207ENST00000488966 MX1P20591 662 aa12.7□□□□□ -0.38
YIPF3-207ENST00000488966 EDNRBP24530 442 aa12.7□□□□□ -0.38
YIPF3-207ENST00000488966 RFC2P35250 354 aa12.7□□□□□ -0.38
YIPF3-207ENST00000488966 RPS6P62753 249 aaKnown RBP12.7□□□□□ -0.38
YIPF3-207ENST00000488966 PDE4DQ08499 809 aa12.7□□□□□ -0.38
YIPF3-207ENST00000488966 PPP2R5BQ15173 497 aa12.7□□□□□ -0.38
YIPF3-207ENST00000488966 AAK1Q2M2I8 961 aa12.7□□□□□ -0.38
YIPF3-207ENST00000488966 RRP12Q5JTH9 1297 aaKnown RBP12.7□□□□□ -0.38
YIPF3-207ENST00000488966 NFRKBQ6P4R8 1299 aa12.7□□□□□ -0.38
YIPF3-207ENST00000488966 HERC6Q8IVU3 1022 aa12.7□□□□□ -0.38
YIPF3-207ENST00000488966 PHOSPHO2Q8TCD6 241 aa12.7□□□□□ -0.38
YIPF3-207ENST00000488966 SCFD2Q8WU76 684 aa12.7□□□□□ -0.38
YIPF3-207ENST00000488966 ARNTL2Q8WYA1 636 aa12.7□□□□□ -0.38
YIPF3-207ENST00000488966 SLC9A7Q96T83 725 aa12.7□□□□□ -0.38
YIPF3-207ENST00000488966 TOMM22Q9NS69 142 aa12.7□□□□□ -0.38
YIPF3-207ENST00000488966 CHD7Q9P2D1 2997 aa12.7□□□□□ -0.38
YIPF3-207ENST00000488966 SALL3Q9BXA9 1300 aa12.69□□□□□ -0.38
YIPF3-207ENST00000488966 LCTP09848 1927 aa12.69□□□□□ -0.38
YIPF3-207ENST00000488966 PITPNM1O00562 1244 aa12.69□□□□□ -0.38
YIPF3-207ENST00000488966 NKRFO15226 690 aaKnown RBP eCLIP12.69□□□□□ -0.38
YIPF3-207ENST00000488966 KPNA6O60684 536 aa12.69□□□□□ -0.38
YIPF3-207ENST00000488966 ARIH2O95376 493 aa12.69□□□□□ -0.38
YIPF3-207ENST00000488966 FGAP02671 866 aa12.69□□□□□ -0.38
YIPF3-207ENST00000488966 PDHBP11177 359 aa12.69□□□□□ -0.38
YIPF3-207ENST00000488966 ALX1Q15699 326 aa12.69□□□□□ -0.38
YIPF3-207ENST00000488966 BRDTQ58F21 947 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms