RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 SLC30A10Q6XR72 485 aa21.68■■□□□ 1.06
HDAC6-231ENST00000488905 TBC1D10CQ8IV04 446 aa21.68■■□□□ 1.06
HDAC6-231ENST00000488905 TIFAQ96CG3 184 aa21.68■■□□□ 1.06
HDAC6-231ENST00000488905 SEZ6LQ9BYH1 1024 aa21.68■■□□□ 1.06
HDAC6-231ENST00000488905 HIPK3Q9H422 1215 aa21.68■■□□□ 1.06
HDAC6-231ENST00000488905 TANC1Q9C0D5 1861 aa21.67■■□□□ 1.06
HDAC6-231ENST00000488905 GRIN2DO15399 1336 aa21.67■■□□□ 1.06
HDAC6-231ENST00000488905 PTPDC1A2A3K4 754 aa21.67■■□□□ 1.06
HDAC6-231ENST00000488905 ACRP10323 421 aa21.67■■□□□ 1.06
HDAC6-231ENST00000488905 ZNF543Q08ER8 600 aa21.67■■□□□ 1.06
HDAC6-231ENST00000488905 MFSD6Q6ZSS7 791 aa21.67■■□□□ 1.06
HDAC6-231ENST00000488905 KIAA1211Q6ZU35 1233 aa21.67■■□□□ 1.06
HDAC6-231ENST00000488905 RILPL2Q969X0 211 aa21.67■■□□□ 1.06
HDAC6-231ENST00000488905 TTC28Q96AY4 2481 aa21.66■■□□□ 1.06
HDAC6-231ENST00000488905 NEDD4P46934 1319 aa21.66■■□□□ 1.06
HDAC6-231ENST00000488905 UMODL1Q5DID0 1318 aa21.66■■□□□ 1.06
HDAC6-231ENST00000488905 WDR19Q8NEZ3 1342 aa21.66■■□□□ 1.06
HDAC6-231ENST00000488905 SNHG28P0DPA3 235 aa21.66■■□□□ 1.06
HDAC6-231ENST00000488905 GRIN2CQ14957 1233 aa21.66■■□□□ 1.06
HDAC6-231ENST00000488905 DUSP28Q4G0W2 176 aa21.66■■□□□ 1.06
HDAC6-231ENST00000488905 ZNF365Q70YC5 407 aa21.66■■□□□ 1.06
HDAC6-231ENST00000488905 CLEC4DQ8WXI8 215 aa21.66■■□□□ 1.06
HDAC6-231ENST00000488905 TTC14Q96N46 770 aa21.66■■□□□ 1.06
HDAC6-231ENST00000488905 PBX4Q9BYU1 374 aa21.66■■□□□ 1.06
HDAC6-231ENST00000488905 ZNF576Q9H609 170 aa21.66■■□□□ 1.06
HDAC6-231ENST00000488905 IL23AQ9NPF7 189 aa21.66■■□□□ 1.06
HDAC6-231ENST00000488905 PNMA2Q9UL42 364 aa21.66■■□□□ 1.06
HDAC6-231ENST00000488905 SCN5AQ14524 2016 aa21.66■■□□□ 1.06
HDAC6-231ENST00000488905 KIAA1217Q5T5P2 1943 aa21.65■■□□□ 1.06
HDAC6-231ENST00000488905 B4GALT4O60513 344 aa21.65■■□□□ 1.06
HDAC6-231ENST00000488905 MFAP1P55081 439 aaKnown RBP21.65■■□□□ 1.06
HDAC6-231ENST00000488905 PSMC6P62333 389 aa21.65■■□□□ 1.06
HDAC6-231ENST00000488905 AAMPQ13685 434 aa21.65■■□□□ 1.06
HDAC6-231ENST00000488905 SMC5Q8IY18 1101 aa21.65■■□□□ 1.06
HDAC6-231ENST00000488905 NOC4LQ9BVI4 516 aaKnown RBP21.65■■□□□ 1.06
HDAC6-231ENST00000488905 RNF41Q9H4P4 317 aaPredicted RBP21.65■■□□□ 1.06
HDAC6-231ENST00000488905 CALML3P27482 149 aa21.64■■□□□ 1.05
HDAC6-231ENST00000488905 PBX2P40425 430 aa21.64■■□□□ 1.05
HDAC6-231ENST00000488905 RNF207Q6ZRF8 634 aa21.64■■□□□ 1.05
HDAC6-231ENST00000488905 WDR11Q9BZH6 1224 aa21.64■■□□□ 1.05
HDAC6-231ENST00000488905 TRPV6Q9H1D0 765 aa21.64■■□□□ 1.05
HDAC6-231ENST00000488905 REV3LO60673 3130 aa21.64■■□□□ 1.05
HDAC6-231ENST00000488905 RBM47A0AV96 593 aaKnown RBP21.63■■□□□ 1.05
HDAC6-231ENST00000488905 GRXCR1A8MXD5 290 aa21.63■■□□□ 1.05
HDAC6-231ENST00000488905 SDSP20132 328 aa21.63■■□□□ 1.05
HDAC6-231ENST00000488905 HERVK_113Q902F9 699 aa21.63■■□□□ 1.05
HDAC6-231ENST00000488905 ESR2Q92731 530 aa21.63■■□□□ 1.05
HDAC6-231ENST00000488905 MTIF3Q9H2K0 278 aaKnown RBP21.63■■□□□ 1.05
HDAC6-231ENST00000488905 CPT1AP50416 773 aa21.62■■□□□ 1.05
HDAC6-231ENST00000488905 CCL23P55773 120 aa21.62■■□□□ 1.05
HDAC6-231ENST00000488905 RPS6P62753 249 aaKnown RBP21.62■■□□□ 1.05
HDAC6-231ENST00000488905 GPATCH4Q5T3I0 446 aaKnown RBP21.62■■□□□ 1.05
HDAC6-231ENST00000488905 B4GALNT3Q6L9W6 998 aa21.62■■□□□ 1.05
HDAC6-231ENST00000488905 MPHOSPH6Q99547 160 aaKnown RBP21.62■■□□□ 1.05
HDAC6-231ENST00000488905 WNT8AQ9H1J5 351 aa21.62■■□□□ 1.05
HDAC6-231ENST00000488905 ALDH8A1Q9H2A2 487 aaPredicted RBP21.62■■□□□ 1.05
HDAC6-231ENST00000488905 POLR3EQ9NVU0 708 aa21.62■■□□□ 1.05
HDAC6-231ENST00000488905 CXXC1Q9P0U4 656 aaPredicted RBP21.62■■□□□ 1.05
HDAC6-231ENST00000488905 TRANK1O15050 2925 aa21.62■■□□□ 1.05
HDAC6-231ENST00000488905 EDNRBP24530 442 aa21.61■■□□□ 1.05
HDAC6-231ENST00000488905 NT5C2P49902 561 aa21.61■■□□□ 1.05
HDAC6-231ENST00000488905 PURAQ00577 322 aaKnown RBP21.61■■□□□ 1.05
HDAC6-231ENST00000488905 PDE4DQ08499 809 aa21.61■■□□□ 1.05
HDAC6-231ENST00000488905 PPP2R5BQ15173 497 aa21.61■■□□□ 1.05
HDAC6-231ENST00000488905 CHD1LQ86WJ1 897 aa21.61■■□□□ 1.05
HDAC6-231ENST00000488905 PLEKHM2Q8IWE5 1019 aa21.61■■□□□ 1.05
HDAC6-231ENST00000488905 DNERQ8NFT8 737 aa21.61■■□□□ 1.05
HDAC6-231ENST00000488905 OR6J1Q8NGC5 347 aa21.61■■□□□ 1.05
HDAC6-231ENST00000488905 ZKSCAN3Q9BRR0 538 aa21.61■■□□□ 1.05
HDAC6-231ENST00000488905 RWDD1Q9H446 243 aaPredicted RBP21.61■■□□□ 1.05
HDAC6-231ENST00000488905 OSBPL3Q9H4L5 887 aa21.61■■□□□ 1.05
HDAC6-231ENST00000488905 RAD50Q92878 1312 aa21.6■■□□□ 1.05
HDAC6-231ENST00000488905 ZNF213O14771 459 aa21.6■■□□□ 1.05
HDAC6-231ENST00000488905 FGBP02675 491 aa21.6■■□□□ 1.05
HDAC6-231ENST00000488905 GOLGA8HP0CJ92 632 aa21.6■■□□□ 1.05
HDAC6-231ENST00000488905 USH1GQ495M9 461 aa21.6■■□□□ 1.05
HDAC6-231ENST00000488905 DGKHQ86XP1 1220 aa21.6■■□□□ 1.05
HDAC6-231ENST00000488905 USP38Q8NB14 1042 aa21.6■■□□□ 1.05
HDAC6-231ENST00000488905 TRIP12Q14669 1992 aaPredicted RBP21.59■■□□□ 1.05
HDAC6-231ENST00000488905 NKRFO15226 690 aaKnown RBP eCLIP21.59■■□□□ 1.05
HDAC6-231ENST00000488905 MYL3P08590 195 aa21.59■■□□□ 1.05
HDAC6-231ENST00000488905 NUCB1Q02818 461 aa21.59■■□□□ 1.05
HDAC6-231ENST00000488905 RAB30Q15771 203 aa21.59■■□□□ 1.05
HDAC6-231ENST00000488905 CWC27Q6UX04 472 aaKnown RBP21.59■■□□□ 1.05
HDAC6-231ENST00000488905 OTOP2Q7RTS6 562 aa21.59■■□□□ 1.05
HDAC6-231ENST00000488905 IQCA1Q86XH1 822 aa21.59■■□□□ 1.05
HDAC6-231ENST00000488905 PNMA1Q8ND90 353 aa21.59■■□□□ 1.05
HDAC6-231ENST00000488905 SCFD2Q8WU76 684 aa21.59■■□□□ 1.05
HDAC6-231ENST00000488905 GAS2L1Q99501 681 aaPredicted RBP21.59■■□□□ 1.05
HDAC6-231ENST00000488905 CPVLQ9H3G5 476 aa21.59■■□□□ 1.05
HDAC6-231ENST00000488905 DIAPH3Q9NSV4 1193 aa21.59■■□□□ 1.05
HDAC6-231ENST00000488905 TRMT13Q9NUP7 481 aaKnown RBP21.59■■□□□ 1.05
HDAC6-231ENST00000488905 MSRAQ9UJ68 235 aa21.59■■□□□ 1.05
HDAC6-231ENST00000488905 TNKSO95271 1327 aa21.58■■□□□ 1.05
HDAC6-231ENST00000488905 KDM4AO75164 1064 aa21.58■■□□□ 1.05
HDAC6-231ENST00000488905 BRDTQ58F21 947 aaPredicted RBP21.58■■□□□ 1.05
HDAC6-231ENST00000488905 SCLYQ96I15 445 aa21.58■■□□□ 1.05
HDAC6-231ENST00000488905 MTG1Q9BT17 334 aaPredicted RBP21.58■■□□□ 1.05
HDAC6-231ENST00000488905 XIRP2A4UGR9 3374 aa21.57■■□□□ 1.04
HDAC6-231ENST00000488905 SUPT20HL2P0C7V6 817 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms