RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 TYW1Q9NV66 732 aaKnown RBP6.49□□□□□ -1.37
SRRM1-215ENST00000488317 TMEFF2Q9UIK5 374 aaPredicted RBP6.49□□□□□ -1.37
SRRM1-215ENST00000488317 G3BP2Q9UN86 482 aaKnown RBP6.49□□□□□ -1.37
SRRM1-215ENST00000488317 NPHP3-ACAD11A0A0J9YXS1 232 aa6.48□□□□□ -1.37
SRRM1-215ENST00000488317 ALG1L2C9J202 215 aa6.48□□□□□ -1.37
SRRM1-215ENST00000488317 GSC2O15499 205 aa6.48□□□□□ -1.37
SRRM1-215ENST00000488317 CYP26A1O43174 497 aa6.48□□□□□ -1.37
SRRM1-215ENST00000488317 NPTXRO95502 500 aa6.48□□□□□ -1.37
SRRM1-215ENST00000488317 IGLV1-40P01703 118 aa6.48□□□□□ -1.37
SRRM1-215ENST00000488317 CLCN7P51798 805 aa6.48□□□□□ -1.37
SRRM1-215ENST00000488317 RTP2Q5QGT7 225 aa6.48□□□□□ -1.37
SRRM1-215ENST00000488317 RSPO2Q6UXX9 243 aaPredicted RBP6.48□□□□□ -1.37
SRRM1-215ENST00000488317 THAP5Q7Z6K1 395 aa6.48□□□□□ -1.37
SRRM1-215ENST00000488317 DDX53Q86TM3 631 aaKnown RBP6.48□□□□□ -1.37
SRRM1-215ENST00000488317 AFAP1L2Q8N4X5 818 aa6.48□□□□□ -1.37
SRRM1-215ENST00000488317 ALG1Q9BT22 464 aa6.48□□□□□ -1.37
SRRM1-215ENST00000488317 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.48□□□□□ -1.37
SRRM1-215ENST00000488317 AP5S1Q9NUS5 200 aa6.48□□□□□ -1.37
SRRM1-215ENST00000488317 SAMD15Q9P1V8 674 aa6.48□□□□□ -1.37
SRRM1-215ENST00000488317 PLAGL2Q9UPG8 496 aa6.48□□□□□ -1.37
SRRM1-215ENST00000488317 TRBV23OR9-2A0A075B6M9 112 aa6.47□□□□□ -1.37
SRRM1-215ENST00000488317 MSCO60682 206 aa6.47□□□□□ -1.37
SRRM1-215ENST00000488317 SRGAP2CP0DJJ0 459 aa6.47□□□□□ -1.37
SRRM1-215ENST00000488317 FSTP19883 344 aa6.47□□□□□ -1.37
SRRM1-215ENST00000488317 POU3F2P20265 443 aaPredicted RBP6.47□□□□□ -1.37
SRRM1-215ENST00000488317 RPL10P27635 214 aaKnown RBP6.47□□□□□ -1.37
SRRM1-215ENST00000488317 LAPTM5Q13571 262 aa6.47□□□□□ -1.37
SRRM1-215ENST00000488317 SART3Q15020 963 aaKnown RBP6.47□□□□□ -1.37
SRRM1-215ENST00000488317 ZCCHC8Q6NZY4 707 aaKnown RBP6.47□□□□□ -1.37
SRRM1-215ENST00000488317 CPNE8Q86YQ8 564 aa6.47□□□□□ -1.37
SRRM1-215ENST00000488317 CCDC103Q8IW40 242 aa6.47□□□□□ -1.37
SRRM1-215ENST00000488317 PLD6Q8N2A8 252 aaKnown RBP6.47□□□□□ -1.37
SRRM1-215ENST00000488317 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.47□□□□□ -1.37
SRRM1-215ENST00000488317 NETO1Q8TDF5 533 aa6.47□□□□□ -1.37
SRRM1-215ENST00000488317 USP7Q93009 1102 aa6.47□□□□□ -1.37
SRRM1-215ENST00000488317 CHAMP1Q96JM3 812 aa6.47□□□□□ -1.37
SRRM1-215ENST00000488317 PTCHD1Q96NR3 888 aa6.47□□□□□ -1.37
SRRM1-215ENST00000488317 MTFR1LQ9H019 292 aa6.47□□□□□ -1.37
SRRM1-215ENST00000488317 PCDHA2Q9Y5H9 948 aa6.47□□□□□ -1.37
SRRM1-215ENST00000488317 PCDHA11Q9Y5I1 949 aa6.47□□□□□ -1.37
SRRM1-215ENST00000488317 NPFFR2Q9Y5X5 522 aa6.47□□□□□ -1.37
SRRM1-215ENST00000488317 TMEM265A0A087WTH1 108 aa6.46□□□□□ -1.38
SRRM1-215ENST00000488317 FAM83GA6ND36 823 aa6.46□□□□□ -1.38
SRRM1-215ENST00000488317 ARNTLO00327 626 aa6.46□□□□□ -1.38
SRRM1-215ENST00000488317 MYO1BO43795 1136 aa6.46□□□□□ -1.38
SRRM1-215ENST00000488317 TBC1D8O95759 1140 aa6.46□□□□□ -1.38
SRRM1-215ENST00000488317 LCP1P13796 627 aa6.46□□□□□ -1.38
SRRM1-215ENST00000488317 ENDOUP21128 410 aaKnown RBP6.46□□□□□ -1.38
SRRM1-215ENST00000488317 SCNN1BP51168 640 aa6.46□□□□□ -1.38
SRRM1-215ENST00000488317 GUCY2FP51841 1108 aa6.46□□□□□ -1.38
SRRM1-215ENST00000488317 EGR3Q06889 387 aa6.46□□□□□ -1.38
SRRM1-215ENST00000488317 PAK1Q13153 545 aa6.46□□□□□ -1.38
SRRM1-215ENST00000488317 DOC2BQ14184 412 aa6.46□□□□□ -1.38
SRRM1-215ENST00000488317 DHCR24Q15392 516 aa6.46□□□□□ -1.38
SRRM1-215ENST00000488317 IFI16Q16666 785 aaKnown RBP6.46□□□□□ -1.38
SRRM1-215ENST00000488317 BRDTQ58F21 947 aaPredicted RBP6.46□□□□□ -1.38
SRRM1-215ENST00000488317 LBX2Q6XYB7 198 aa6.46□□□□□ -1.38
SRRM1-215ENST00000488317 TMPRSS7Q7RTY8 843 aa6.46□□□□□ -1.38
SRRM1-215ENST00000488317 IGSF22Q8N9C0 903 aa6.46□□□□□ -1.38
SRRM1-215ENST00000488317 RCBTB1Q8NDN9 531 aa6.46□□□□□ -1.38
SRRM1-215ENST00000488317 OR2W6PQ8NHA6 318 aa6.46□□□□□ -1.38
SRRM1-215ENST00000488317 WDR66Q8TBY9 1149 aa6.46□□□□□ -1.38
SRRM1-215ENST00000488317 SYTL4Q96C24 671 aaPredicted RBP6.46□□□□□ -1.38
SRRM1-215ENST00000488317 SEMA3GQ9NS98 782 aa6.46□□□□□ -1.38
SRRM1-215ENST00000488317 FGF10O15520 208 aaPredicted RBP6.45□□□□□ -1.38
SRRM1-215ENST00000488317 PMLP29590 882 aa6.45□□□□□ -1.38
SRRM1-215ENST00000488317 EXOSC10Q01780 885 aaKnown RBP6.45□□□□□ -1.38
SRRM1-215ENST00000488317 RASSF7Q02833 373 aa6.45□□□□□ -1.38
SRRM1-215ENST00000488317 TESK1Q15569 626 aa6.45□□□□□ -1.38
SRRM1-215ENST00000488317 SEPT7Q16181 437 aaKnown RBP6.45□□□□□ -1.38
SRRM1-215ENST00000488317 CPSF6Q16630 551 aaKnown RBP eCLIP6.45□□□□□ -1.38
SRRM1-215ENST00000488317 KIZQ2M2Z5 673 aa6.45□□□□□ -1.38
SRRM1-215ENST00000488317 GAB4Q2WGN9 574 aa6.45□□□□□ -1.38
SRRM1-215ENST00000488317 ODR4Q5SWX8 454 aa6.45□□□□□ -1.38
SRRM1-215ENST00000488317 ZPBP2Q6X784 338 aa6.45□□□□□ -1.38
SRRM1-215ENST00000488317 WAPLQ7Z5K2 1190 aa6.45□□□□□ -1.38
SRRM1-215ENST00000488317 MMP19Q99542 508 aa6.45□□□□□ -1.38
SRRM1-215ENST00000488317 TTC1Q99614 292 aa6.45□□□□□ -1.38
SRRM1-215ENST00000488317 ATP13A1Q9HD20 1204 aa6.45□□□□□ -1.38
SRRM1-215ENST00000488317 SNX11Q9Y5W9 270 aa6.45□□□□□ -1.38
SRRM1-215ENST00000488317 M0R2C6 588 aa6.44□□□□□ -1.38
SRRM1-215ENST00000488317 BRINP1O60477 761 aa6.44□□□□□ -1.38
SRRM1-215ENST00000488317 DNM2P50570 870 aa6.44□□□□□ -1.38
SRRM1-215ENST00000488317 ST5P78524 1137 aa6.44□□□□□ -1.38
SRRM1-215ENST00000488317 INF2Q27J81 1249 aa6.44□□□□□ -1.38
SRRM1-215ENST00000488317 FAM47CQ5HY64 1035 aa6.44□□□□□ -1.38
SRRM1-215ENST00000488317 ABHD17CQ6PCB6 329 aa6.44□□□□□ -1.38
SRRM1-215ENST00000488317 NOL8Q76FK4 1167 aaKnown RBP6.44□□□□□ -1.38
SRRM1-215ENST00000488317 PI4K2BQ8TCG2 481 aa6.44□□□□□ -1.38
SRRM1-215ENST00000488317 JDP2Q8WYK2 163 aa6.44□□□□□ -1.38
SRRM1-215ENST00000488317 CABP5Q9NP86 173 aa6.44□□□□□ -1.38
SRRM1-215ENST00000488317 PIM2Q9P1W9 311 aa6.44□□□□□ -1.38
SRRM1-215ENST00000488317 ZKSCAN5Q9Y2L8 839 aa6.44□□□□□ -1.38
SRRM1-215ENST00000488317 COQ6Q9Y2Z9 468 aa6.44□□□□□ -1.38
SRRM1-215ENST00000488317 TIMM13Q9Y5L4 95 aaPredicted RBP6.44□□□□□ -1.38
SRRM1-215ENST00000488317 ARVCFO00192 962 aa6.43□□□□□ -1.38
SRRM1-215ENST00000488317 GLRX3O76003 335 aaKnown RBP6.43□□□□□ -1.38
SRRM1-215ENST00000488317 EYA4O95677 639 aa6.43□□□□□ -1.38
SRRM1-215ENST00000488317 SOD2P04179 222 aa6.43□□□□□ -1.38
SRRM1-215ENST00000488317 H2AFB1P0C5Y9 115 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms