RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 CYP21A2P08686 494 aa13.14□□□□□ -0.31
RAB11FIP3-210ENST00000487899 EDNRBP24530 442 aa13.14□□□□□ -0.31
RAB11FIP3-210ENST00000487899 CDK7P50613 346 aa13.14□□□□□ -0.31
RAB11FIP3-210ENST00000487899 EPHB4P54760 987 aa13.14□□□□□ -0.31
RAB11FIP3-210ENST00000487899 RPS6P62753 249 aaKnown RBP13.14□□□□□ -0.31
RAB11FIP3-210ENST00000487899 PWP2Q15269 919 aaKnown RBP13.14□□□□□ -0.31
RAB11FIP3-210ENST00000487899 USH1GQ495M9 461 aa13.14□□□□□ -0.31
RAB11FIP3-210ENST00000487899 CYB5R4Q7L1T6 521 aa13.14□□□□□ -0.31
RAB11FIP3-210ENST00000487899 FAM126BQ8IXS8 530 aa13.14□□□□□ -0.31
RAB11FIP3-210ENST00000487899 PCSK9Q8NBP7 692 aaKnown RBP13.14□□□□□ -0.31
RAB11FIP3-210ENST00000487899 GLT1D1Q96MS3 346 aa13.14□□□□□ -0.31
RAB11FIP3-210ENST00000487899 KRT23Q9C075 422 aa13.14□□□□□ -0.31
RAB11FIP3-210ENST00000487899 UBA5Q9GZZ9 404 aa13.14□□□□□ -0.31
RAB11FIP3-210ENST00000487899 KAT14Q9H8E8 782 aa13.14□□□□□ -0.31
RAB11FIP3-210ENST00000487899 VCANP13611 3396 aa13.14□□□□□ -0.31
RAB11FIP3-210ENST00000487899 MROH7Q68CQ1 1323 aa13.13□□□□□ -0.31
RAB11FIP3-210ENST00000487899 TRIP12Q14669 1992 aaPredicted RBP13.13□□□□□ -0.31
RAB11FIP3-210ENST00000487899 PTPDC1A2A3K4 754 aa13.13□□□□□ -0.31
RAB11FIP3-210ENST00000487899 DLL1O00548 723 aa13.13□□□□□ -0.31
RAB11FIP3-210ENST00000487899 SGSM2O43147 1006 aa13.13□□□□□ -0.31
RAB11FIP3-210ENST00000487899 SHHQ15465 462 aa13.13□□□□□ -0.31
RAB11FIP3-210ENST00000487899 FSCN1Q16658 493 aaKnown RBP13.13□□□□□ -0.31
RAB11FIP3-210ENST00000487899 CCDC178Q5BJE1 867 aa13.13□□□□□ -0.31
RAB11FIP3-210ENST00000487899 GNASQ5JWF2 1037 aa13.13□□□□□ -0.31
RAB11FIP3-210ENST00000487899 RNF207Q6ZRF8 634 aa13.13□□□□□ -0.31
RAB11FIP3-210ENST00000487899 STOX1Q6ZVD7 989 aa13.13□□□□□ -0.31
RAB11FIP3-210ENST00000487899 SLC17A8Q8NDX2 589 aa13.13□□□□□ -0.31
RAB11FIP3-210ENST00000487899 UBAC1Q9BSL1 405 aa13.13□□□□□ -0.31
RAB11FIP3-210ENST00000487899 SPC25Q9HBM1 224 aa13.13□□□□□ -0.31
RAB11FIP3-210ENST00000487899 ADD3Q9UEY8 706 aaKnown RBP13.13□□□□□ -0.31
RAB11FIP3-210ENST00000487899 GRIN2DO15399 1336 aa13.13□□□□□ -0.31
RAB11FIP3-210ENST00000487899 A0A0U1RQG5 324 aaPredicted RBP13.12□□□□□ -0.31
RAB11FIP3-210ENST00000487899 RBM47A0AV96 593 aaKnown RBP13.12□□□□□ -0.31
RAB11FIP3-210ENST00000487899 CALML3P27482 149 aa13.12□□□□□ -0.31
RAB11FIP3-210ENST00000487899 SLC35G1Q2M3R5 365 aa13.12□□□□□ -0.31
RAB11FIP3-210ENST00000487899 QRICH1Q2TAL8 776 aa13.12□□□□□ -0.31
RAB11FIP3-210ENST00000487899 CXCL17Q6UXB2 119 aa13.12□□□□□ -0.31
RAB11FIP3-210ENST00000487899 ADGRF4Q8IZF3 695 aa13.12□□□□□ -0.31
RAB11FIP3-210ENST00000487899 STAG2Q8N3U4 1231 aa13.12□□□□□ -0.31
RAB11FIP3-210ENST00000487899 DEFB123Q8N688 67 aa13.12□□□□□ -0.31
RAB11FIP3-210ENST00000487899 SENP2Q9HC62 589 aa13.12□□□□□ -0.31
RAB11FIP3-210ENST00000487899 COL20A1Q9P218 1284 aa13.12□□□□□ -0.31
RAB11FIP3-210ENST00000487899 PNMA2Q9UL42 364 aa13.12□□□□□ -0.31
RAB11FIP3-210ENST00000487899 ABCB11O95342 1321 aa13.12□□□□□ -0.31
RAB11FIP3-210ENST00000487899 DCDC2CA8MYV0 355 aa13.11□□□□□ -0.31
RAB11FIP3-210ENST00000487899 ARVCFO00192 962 aa13.11□□□□□ -0.31
RAB11FIP3-210ENST00000487899 OPLAHO14841 1288 aa13.11□□□□□ -0.31
RAB11FIP3-210ENST00000487899 PPP1R11O60927 126 aaPredicted RBP13.11□□□□□ -0.31
RAB11FIP3-210ENST00000487899 CD4P01730 458 aa13.11□□□□□ -0.31
RAB11FIP3-210ENST00000487899 PARP1P09874 1014 aaKnown RBP13.11□□□□□ -0.31
RAB11FIP3-210ENST00000487899 DUSP28Q4G0W2 176 aa13.11□□□□□ -0.31
RAB11FIP3-210ENST00000487899 IFIT1BQ5T764 474 aaKnown RBP13.11□□□□□ -0.31
RAB11FIP3-210ENST00000487899 IQSEC1Q6DN90 963 aa13.11□□□□□ -0.31
RAB11FIP3-210ENST00000487899 SLC43A3Q8NBI5 491 aa13.11□□□□□ -0.31
RAB11FIP3-210ENST00000487899 DNERQ8NFT8 737 aa13.11□□□□□ -0.31
RAB11FIP3-210ENST00000487899 MTMR8Q96EF0 704 aa13.11□□□□□ -0.31
RAB11FIP3-210ENST00000487899 JMJD4Q9H9V9 463 aa13.11□□□□□ -0.31
RAB11FIP3-210ENST00000487899 TMEM39AQ9NV64 488 aa13.11□□□□□ -0.31
RAB11FIP3-210ENST00000487899 MTMR10Q9NXD2 777 aa13.11□□□□□ -0.31
RAB11FIP3-210ENST00000487899 Q9Y3F1 56 aa13.11□□□□□ -0.31
RAB11FIP3-210ENST00000487899 SPTBN5Q9NRC6 3674 aaKnown RBP13.11□□□□□ -0.31
RAB11FIP3-210ENST00000487899 RAG1P15918 1043 aa13.1□□□□□ -0.31
RAB11FIP3-210ENST00000487899 ANTXR2P58335 489 aa13.1□□□□□ -0.31
RAB11FIP3-210ENST00000487899 FPGSQ05932 587 aa13.1□□□□□ -0.31
RAB11FIP3-210ENST00000487899 COL9A3Q14050 684 aaPredicted RBP13.1□□□□□ -0.31
RAB11FIP3-210ENST00000487899 KIAA1211Q6ZU35 1233 aa13.1□□□□□ -0.31
RAB11FIP3-210ENST00000487899 NOL8Q76FK4 1167 aaKnown RBP13.1□□□□□ -0.31
RAB11FIP3-210ENST00000487899 RGS22Q8NE09 1264 aa13.1□□□□□ -0.31
RAB11FIP3-210ENST00000487899 RUFY2Q8WXA3 655 aa13.1□□□□□ -0.31
RAB11FIP3-210ENST00000487899 GUCD1Q96NT3 240 aa13.1□□□□□ -0.31
RAB11FIP3-210ENST00000487899 MAD2L2Q9UI95 211 aa13.1□□□□□ -0.31
RAB11FIP3-210ENST00000487899 SIP14410 1827 aa13.1□□□□□ -0.31
RAB11FIP3-210ENST00000487899 TET1Q8NFU7 2136 aa13.1□□□□□ -0.31
RAB11FIP3-210ENST00000487899 PALM3A6NDB9 673 aaPredicted RBP13.09□□□□□ -0.31
RAB11FIP3-210ENST00000487899 E7EWF7 191 aa13.09□□□□□ -0.31
RAB11FIP3-210ENST00000487899 DYNC1LI2O43237 492 aaPredicted RBP13.09□□□□□ -0.31
RAB11FIP3-210ENST00000487899 ARIH2O95376 493 aa13.09□□□□□ -0.31
RAB11FIP3-210ENST00000487899 TIMP1P01033 207 aa13.09□□□□□ -0.31
RAB11FIP3-210ENST00000487899 PSMC6P62333 389 aa13.09□□□□□ -0.31
RAB11FIP3-210ENST00000487899 GHRHRQ02643 423 aa13.09□□□□□ -0.31
RAB11FIP3-210ENST00000487899 PDE4DQ08499 809 aa13.09□□□□□ -0.31
RAB11FIP3-210ENST00000487899 SKAP1Q86WV1 359 aa13.09□□□□□ -0.31
RAB11FIP3-210ENST00000487899 MB21D2Q8IYB1 491 aaPredicted RBP13.09□□□□□ -0.31
RAB11FIP3-210ENST00000487899 SYTL5Q8TDW5 730 aaPredicted RBP13.09□□□□□ -0.31
RAB11FIP3-210ENST00000487899 TBC1D5Q92609 795 aa13.09□□□□□ -0.31
RAB11FIP3-210ENST00000487899 MAP4K1Q92918 833 aa13.09□□□□□ -0.31
RAB11FIP3-210ENST00000487899 WDR11Q9BZH6 1224 aa13.09□□□□□ -0.31
RAB11FIP3-210ENST00000487899 AP5M1Q9H0R1 490 aa13.09□□□□□ -0.31
RAB11FIP3-210ENST00000487899 U3KPZ7 1027 aaPredicted RBP13.09□□□□□ -0.31
RAB11FIP3-210ENST00000487899 UMODL1Q5DID0 1318 aa13.09□□□□□ -0.31
RAB11FIP3-210ENST00000487899 COL4A4P53420 1690 aaPredicted RBP13.08□□□□□ -0.31
RAB11FIP3-210ENST00000487899 B4GALT4O60513 344 aa13.08□□□□□ -0.32
RAB11FIP3-210ENST00000487899 CABYRO75952 493 aa13.08□□□□□ -0.32
RAB11FIP3-210ENST00000487899 PURAQ00577 322 aaKnown RBP13.08□□□□□ -0.32
RAB11FIP3-210ENST00000487899 ITGA7Q13683 1181 aa13.08□□□□□ -0.32
RAB11FIP3-210ENST00000487899 GRM4Q14833 912 aa13.08□□□□□ -0.32
RAB11FIP3-210ENST00000487899 PPP2R5BQ15173 497 aa13.08□□□□□ -0.32
RAB11FIP3-210ENST00000487899 FAM109BQ6ICB4 259 aaPredicted RBP13.08□□□□□ -0.32
RAB11FIP3-210ENST00000487899 SCFD2Q8WU76 684 aa13.08□□□□□ -0.32
RAB11FIP3-210ENST00000487899 COPS5Q92905 334 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms