RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 MTMR8Q96EF0 704 aa23.77■■□□□ 1.4
HDAC4-209ENST00000487617 MPHOSPH6Q99547 160 aaKnown RBP23.77■■□□□ 1.4
HDAC4-209ENST00000487617 GDF15Q99988 308 aa23.77■■□□□ 1.4
HDAC4-209ENST00000487617 AMNQ9BXJ7 453 aa23.77■■□□□ 1.4
HDAC4-209ENST00000487617 GPHNQ9NQX3 736 aaPredicted RBP23.77■■□□□ 1.4
HDAC4-209ENST00000487617 ZBTB5O15062 677 aa23.76■■□□□ 1.39
HDAC4-209ENST00000487617 SMPD1P17405 629 aa23.76■■□□□ 1.39
HDAC4-209ENST00000487617 CST5P28325 142 aaPredicted RBP23.76■■□□□ 1.39
HDAC4-209ENST00000487617 MAGEA10P43363 369 aaPredicted RBP23.76■■□□□ 1.39
HDAC4-209ENST00000487617 PDE4DQ08499 809 aa23.76■■□□□ 1.39
HDAC4-209ENST00000487617 CCSAPQ6IQ19 270 aaPredicted RBP23.76■■□□□ 1.39
HDAC4-209ENST00000487617 PCSK9Q8NBP7 692 aaKnown RBP23.76■■□□□ 1.39
HDAC4-209ENST00000487617 TBC1D5Q92609 795 aa23.76■■□□□ 1.39
HDAC4-209ENST00000487617 TMEM87BQ96K49 555 aa23.76■■□□□ 1.39
HDAC4-209ENST00000487617 MAF1Q9H063 256 aa23.76■■□□□ 1.39
HDAC4-209ENST00000487617 PCDH10Q9P2E7 1040 aa23.76■■□□□ 1.39
HDAC4-209ENST00000487617 PRKAG2Q9UGJ0 569 aa23.76■■□□□ 1.39
HDAC4-209ENST00000487617 SLC35G1Q2M3R5 365 aa23.75■■□□□ 1.39
HDAC4-209ENST00000487617 GNASQ5JWF2 1037 aa23.75■■□□□ 1.39
HDAC4-209ENST00000487617 C1orf53Q5VUE5 145 aa23.75■■□□□ 1.39
HDAC4-209ENST00000487617 NFXL1Q6ZNB6 911 aa23.75■■□□□ 1.39
HDAC4-209ENST00000487617 HOMER1Q86YM7 354 aa23.75■■□□□ 1.39
HDAC4-209ENST00000487617 ZNF654Q8IZM8 581 aa23.75■■□□□ 1.39
HDAC4-209ENST00000487617 TMTC2Q8N394 836 aa23.75■■□□□ 1.39
HDAC4-209ENST00000487617 AP5M1Q9H0R1 490 aa23.75■■□□□ 1.39
HDAC4-209ENST00000487617 RIOX1Q9H6W3 641 aa23.75■■□□□ 1.39
HDAC4-209ENST00000487617 STARD7Q9NQZ5 370 aa23.75■■□□□ 1.39
HDAC4-209ENST00000487617 GNEQ9Y223 722 aaKnown RBP23.75■■□□□ 1.39
HDAC4-209ENST00000487617 B4DLN1 442 aa23.74■■□□□ 1.39
HDAC4-209ENST00000487617 SH2B2O14492 632 aaPredicted RBP23.74■■□□□ 1.39
HDAC4-209ENST00000487617 DDAH1O94760 285 aa23.74■■□□□ 1.39
HDAC4-209ENST00000487617 SLC34A2O95436 690 aa23.74■■□□□ 1.39
HDAC4-209ENST00000487617 MRPL12P52815 198 aaKnown RBP23.74■■□□□ 1.39
HDAC4-209ENST00000487617 COL9A3Q14050 684 aaPredicted RBP23.74■■□□□ 1.39
HDAC4-209ENST00000487617 TLK2Q86UE8 772 aa23.74■■□□□ 1.39
HDAC4-209ENST00000487617 SYTL5Q8TDW5 730 aaPredicted RBP23.74■■□□□ 1.39
HDAC4-209ENST00000487617 PIGSQ96S52 555 aa23.74■■□□□ 1.39
HDAC4-209ENST00000487617 MYL10Q9BUA6 226 aa23.74■■□□□ 1.39
HDAC4-209ENST00000487617 LCTP09848 1927 aa23.74■■□□□ 1.39
HDAC4-209ENST00000487617 CCDC69A6NI79 296 aa23.73■■□□□ 1.39
HDAC4-209ENST00000487617 CTAGE5O15320 804 aa23.73■■□□□ 1.39
HDAC4-209ENST00000487617 DYNC1LI2O43237 492 aaPredicted RBP23.73■■□□□ 1.39
HDAC4-209ENST00000487617 PPP1R11O60927 126 aaPredicted RBP23.73■■□□□ 1.39
HDAC4-209ENST00000487617 ASGR1P07306 291 aa23.73■■□□□ 1.39
HDAC4-209ENST00000487617 EDNRBP24530 442 aa23.73■■□□□ 1.39
HDAC4-209ENST00000487617 BMP8BP34820 402 aa23.73■■□□□ 1.39
HDAC4-209ENST00000487617 FXR1P51114 621 aaKnown RBP eCLIP23.73■■□□□ 1.39
HDAC4-209ENST00000487617 MDM2Q00987 491 aaPredicted RBP23.73■■□□□ 1.39
HDAC4-209ENST00000487617 BEX3Q00994 111 aa23.73■■□□□ 1.39
HDAC4-209ENST00000487617 TLE2Q04725 743 aa23.73■■□□□ 1.39
HDAC4-209ENST00000487617 CTCFLQ8NI51 663 aaPredicted RBP23.73■■□□□ 1.39
HDAC4-209ENST00000487617 VTI1AQ96AJ9 217 aa23.73■■□□□ 1.39
HDAC4-209ENST00000487617 GLT1D1Q96MS3 346 aa23.73■■□□□ 1.39
HDAC4-209ENST00000487617 PRDM5Q9NQX1 630 aaPredicted RBP23.73■■□□□ 1.39
HDAC4-209ENST00000487617 PCDHA1Q9Y5I3 950 aa23.73■■□□□ 1.39
HDAC4-209ENST00000487617 A0A1W2PPC1 479 aa23.72■■□□□ 1.39
HDAC4-209ENST00000487617 CYTH3O43739 400 aa23.72■■□□□ 1.39
HDAC4-209ENST00000487617 CFBP00751 764 aa23.72■■□□□ 1.39
HDAC4-209ENST00000487617 PTGS1P23219 599 aa23.72■■□□□ 1.39
HDAC4-209ENST00000487617 KIF5BP33176 963 aa23.72■■□□□ 1.39
HDAC4-209ENST00000487617 NKX3-2P78367 333 aa23.72■■□□□ 1.39
HDAC4-209ENST00000487617 TMEM63BQ5T3F8 832 aa23.72■■□□□ 1.39
HDAC4-209ENST00000487617 TAAR1Q96RJ0 339 aa23.72■■□□□ 1.39
HDAC4-209ENST00000487617 MAP3K14Q99558 947 aa23.72■■□□□ 1.39
HDAC4-209ENST00000487617 LBHD1Q9BQE6 289 aaPredicted RBP23.72■■□□□ 1.39
HDAC4-209ENST00000487617 LRRC2Q9BYS8 371 aa23.72■■□□□ 1.39
HDAC4-209ENST00000487617 WDR11Q9BZH6 1224 aa23.72■■□□□ 1.39
HDAC4-209ENST00000487617 COL20A1Q9P218 1284 aa23.72■■□□□ 1.39
HDAC4-209ENST00000487617 Q9Y3F1 56 aa23.72■■□□□ 1.39
HDAC4-209ENST00000487617 LRRC37A2A6NM11 1700 aa23.71■■□□□ 1.39
HDAC4-209ENST00000487617 LIFRP42702 1097 aa23.71■■□□□ 1.39
HDAC4-209ENST00000487617 TRAF1Q13077 416 aa23.71■■□□□ 1.39
HDAC4-209ENST00000487617 FSCN1Q16658 493 aaKnown RBP23.71■■□□□ 1.39
HDAC4-209ENST00000487617 DUSP28Q4G0W2 176 aa23.71■■□□□ 1.39
HDAC4-209ENST00000487617 NSUN6Q8TEA1 469 aaKnown RBP23.71■■□□□ 1.39
HDAC4-209ENST00000487617 PIBF1Q8WXW3 757 aa23.71■■□□□ 1.39
HDAC4-209ENST00000487617 NEK1Q96PY6 1258 aa23.71■■□□□ 1.39
HDAC4-209ENST00000487617 UBE2OQ9C0C9 1292 aaKnown RBP23.71■■□□□ 1.39
HDAC4-209ENST00000487617 TRIOBPQ9H2D6 2365 aa23.71■■□□□ 1.39
HDAC4-209ENST00000487617 ELP1O95163 1332 aa23.7■■□□□ 1.38
HDAC4-209ENST00000487617 PNMA6FA0A0J9YX94 578 aa23.7■■□□□ 1.38
HDAC4-209ENST00000487617 RBM47A0AV96 593 aaKnown RBP23.7■■□□□ 1.38
HDAC4-209ENST00000487617 OPLAHO14841 1288 aa23.7■■□□□ 1.38
HDAC4-209ENST00000487617 PQBP1O60828 265 aaKnown RBP23.7■■□□□ 1.38
HDAC4-209ENST00000487617 RASEFQ8IZ41 740 aa23.7■■□□□ 1.38
HDAC4-209ENST00000487617 RMDN3Q96TC7 470 aa23.7■■□□□ 1.38
HDAC4-209ENST00000487617 PDLIM7Q9NR12 457 aa23.7■■□□□ 1.38
HDAC4-209ENST00000487617 ZEB2O60315 1214 aa23.69■■□□□ 1.38
HDAC4-209ENST00000487617 HSD17B4P51659 736 aa23.69■■□□□ 1.38
HDAC4-209ENST00000487617 ARHGEF16Q5VV41 709 aa23.69■■□□□ 1.38
HDAC4-209ENST00000487617 PPP4R2Q9NY27 417 aa23.69■■□□□ 1.38
HDAC4-209ENST00000487617 SLC12A7Q9Y666 1083 aa23.69■■□□□ 1.38
HDAC4-209ENST00000487617 CENPBP07199 599 aaPredicted RBP23.68■■□□□ 1.38
HDAC4-209ENST00000487617 CALM1P0DP23 149 aa23.68■■□□□ 1.38
HDAC4-209ENST00000487617 CALM2P0DP24 149 aa23.68■■□□□ 1.38
HDAC4-209ENST00000487617 CALM3P0DP25 149 aa23.68■■□□□ 1.38
HDAC4-209ENST00000487617 RXRAP19793 462 aa23.68■■□□□ 1.38
HDAC4-209ENST00000487617 GNAQP50148 359 aa23.68■■□□□ 1.38
HDAC4-209ENST00000487617 KRT32Q14532 448 aa23.68■■□□□ 1.38
HDAC4-209ENST00000487617 PPP2R5BQ15173 497 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms