RNA–Protein interactions for RNA: ENST00000487575.6

CBWD1-215, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-215ENST00000487575 RPAP3Q9H6T3 665 aaPredicted RBP7.97□□□□□ -1.13
CBWD1-215ENST00000487575 FBXO28Q9NVF7 368 aa7.97□□□□□ -1.13
CBWD1-215ENST00000487575 DACT1Q9NYF0 836 aa7.97□□□□□ -1.13
CBWD1-215ENST00000487575 TMOD4Q9NZQ9 345 aa7.97□□□□□ -1.13
CBWD1-215ENST00000487575 FBXO2Q9UK22 296 aaPredicted RBP7.97□□□□□ -1.13
CBWD1-215ENST00000487575 PNMA2Q9UL42 364 aa7.97□□□□□ -1.13
CBWD1-215ENST00000487575 AFG3L2Q9Y4W6 797 aa7.97□□□□□ -1.13
CBWD1-215ENST00000487575 SRPRBQ9Y5M8 271 aaKnown RBP7.97□□□□□ -1.13
CBWD1-215ENST00000487575 LAD1O00515 517 aa7.96□□□□□ -1.13
CBWD1-215ENST00000487575 KINO60870 393 aaKnown RBP7.96□□□□□ -1.13
CBWD1-215ENST00000487575 NR1I2O75469 434 aa7.96□□□□□ -1.13
CBWD1-215ENST00000487575 FLOT1O75955 427 aa7.96□□□□□ -1.13
CBWD1-215ENST00000487575 CLK2P49760 499 aaKnown RBP7.96□□□□□ -1.13
CBWD1-215ENST00000487575 HMGCS2P54868 508 aa7.96□□□□□ -1.13
CBWD1-215ENST00000487575 PTGDRQ13258 359 aa7.96□□□□□ -1.13
CBWD1-215ENST00000487575 TTLL12Q14166 644 aaPredicted RBP7.96□□□□□ -1.13
CBWD1-215ENST00000487575 USH1GQ495M9 461 aa7.96□□□□□ -1.13
CBWD1-215ENST00000487575 RESP18Q5W5W9 173 aa7.96□□□□□ -1.13
CBWD1-215ENST00000487575 ARL6IP4Q66PJ3 421 aaKnown RBP7.96□□□□□ -1.13
CBWD1-215ENST00000487575 CCDC174Q6PII3 467 aa7.96□□□□□ -1.13
CBWD1-215ENST00000487575 ARMC9Q7Z3E5 817 aa7.96□□□□□ -1.13
CBWD1-215ENST00000487575 ANKRD13AQ8IZ07 590 aa7.96□□□□□ -1.13
CBWD1-215ENST00000487575 ENGASEQ8NFI3 743 aa7.96□□□□□ -1.13
CBWD1-215ENST00000487575 TBCKQ8TEA7 893 aa7.96□□□□□ -1.13
CBWD1-215ENST00000487575 NUP62CLQ9H1M0 184 aa7.96□□□□□ -1.13
CBWD1-215ENST00000487575 CLSTN2Q9H4D0 955 aa7.96□□□□□ -1.13
CBWD1-215ENST00000487575 TMEM260Q9NX78 707 aa7.96□□□□□ -1.13
CBWD1-215ENST00000487575 PPP1R9AQ9ULJ8 1098 aa7.96□□□□□ -1.13
CBWD1-215ENST00000487575 MRPL11Q9Y3B7 192 aaKnown RBP7.96□□□□□ -1.13
CBWD1-215ENST00000487575 ABCB11O95342 1321 aa7.96□□□□□ -1.14
CBWD1-215ENST00000487575 FAM237AA0A1B0GTK4 181 aa7.96□□□□□ -1.14
CBWD1-215ENST00000487575 A0A1B0GVL5 298 aa7.96□□□□□ -1.14
CBWD1-215ENST00000487575 SYCE3A1L190 88 aa7.96□□□□□ -1.14
CBWD1-215ENST00000487575 WNT7AO00755 349 aa7.96□□□□□ -1.14
CBWD1-215ENST00000487575 CTAGE5O15320 804 aa7.96□□□□□ -1.14
CBWD1-215ENST00000487575 ZBED4O75132 1171 aa7.96□□□□□ -1.14
CBWD1-215ENST00000487575 FOSP01100 380 aaPredicted RBP7.96□□□□□ -1.14
CBWD1-215ENST00000487575 ICAM1P05362 532 aa7.96□□□□□ -1.14
CBWD1-215ENST00000487575 NDUFA8P51970 172 aa7.96□□□□□ -1.14
CBWD1-215ENST00000487575 PPATQ06203 517 aa7.96□□□□□ -1.14
CBWD1-215ENST00000487575 AP3B2Q13367 1082 aa7.96□□□□□ -1.14
CBWD1-215ENST00000487575 SNW1Q13573 536 aaKnown RBP7.96□□□□□ -1.14
CBWD1-215ENST00000487575 UBE2SQ16763 222 aa7.96□□□□□ -1.14
CBWD1-215ENST00000487575 SH3D19Q5HYK7 790 aa7.96□□□□□ -1.14
CBWD1-215ENST00000487575 SHC4Q6S5L8 630 aa7.96□□□□□ -1.14
CBWD1-215ENST00000487575 LDHDQ86WU2 507 aa7.96□□□□□ -1.14
CBWD1-215ENST00000487575 ERO1BQ86YB8 467 aa7.96□□□□□ -1.14
CBWD1-215ENST00000487575 FMR1NBQ8N0W7 255 aaPredicted RBP7.96□□□□□ -1.14
CBWD1-215ENST00000487575 CLIC6Q96NY7 704 aa7.96□□□□□ -1.14
CBWD1-215ENST00000487575 NAP1L4Q99733 375 aaKnown RBP7.96□□□□□ -1.14
CBWD1-215ENST00000487575 FAM13BQ9NYF5 915 aa7.96□□□□□ -1.14
CBWD1-215ENST00000487575 CTDP1Q9Y5B0 961 aaPredicted RBP7.96□□□□□ -1.14
CBWD1-215ENST00000487575 GOLGA6L3A6NEY3 463 aa7.95□□□□□ -1.14
CBWD1-215ENST00000487575 UNCXA6NJT0 531 aa7.95□□□□□ -1.14
CBWD1-215ENST00000487575 USP17L15C9J2P7 530 aa7.95□□□□□ -1.14
CBWD1-215ENST00000487575 USP17L13C9JLJ4 530 aa7.95□□□□□ -1.14
CBWD1-215ENST00000487575 USP17L11C9JVI0 530 aa7.95□□□□□ -1.14
CBWD1-215ENST00000487575 USP17L18D6R9N7 530 aa7.95□□□□□ -1.14
CBWD1-215ENST00000487575 USP17L22D6RA61 530 aa7.95□□□□□ -1.14
CBWD1-215ENST00000487575 USP17L17D6RBQ6 530 aa7.95□□□□□ -1.14
CBWD1-215ENST00000487575 USP17L19D6RCP7 530 aa7.95□□□□□ -1.14
CBWD1-215ENST00000487575 USP17L20D6RJB6 530 aa7.95□□□□□ -1.14
CBWD1-215ENST00000487575 PIK3CDO00329 1044 aa7.95□□□□□ -1.14
CBWD1-215ENST00000487575 MEIS2O14770 477 aa7.95□□□□□ -1.14
CBWD1-215ENST00000487575 CCNT1O60563 726 aaKnown RBP7.95□□□□□ -1.14
CBWD1-215ENST00000487575 HOXB3P14651 431 aaPredicted RBP7.95□□□□□ -1.14
CBWD1-215ENST00000487575 PFKFB1P16118 471 aa7.95□□□□□ -1.14
CBWD1-215ENST00000487575 PRPHP41219 470 aa7.95□□□□□ -1.14
CBWD1-215ENST00000487575 USP17L24Q0WX57 530 aa7.95□□□□□ -1.14
CBWD1-215ENST00000487575 DGKZQ13574 1117 aa7.95□□□□□ -1.14
CBWD1-215ENST00000487575 LETM2Q2VYF4 491 aa7.95□□□□□ -1.14
CBWD1-215ENST00000487575 USP17L6PQ6QN14 398 aa7.95□□□□□ -1.14
CBWD1-215ENST00000487575 LRSAM1Q6UWE0 723 aa7.95□□□□□ -1.14
CBWD1-215ENST00000487575 C4orf32Q8N8J7 132 aa7.95□□□□□ -1.14
CBWD1-215ENST00000487575 TNMDQ9H2S6 317 aa7.95□□□□□ -1.14
CBWD1-215ENST00000487575 RRAGCQ9HB90 399 aa7.95□□□□□ -1.14
CBWD1-215ENST00000487575 SLC38A10Q9HBR0 1119 aa7.95□□□□□ -1.14
CBWD1-215ENST00000487575 HPSEQ9Y251 543 aa7.95□□□□□ -1.14
CBWD1-215ENST00000487575 PHIPQ8WWQ0 1821 aa7.94□□□□□ -1.14
CBWD1-215ENST00000487575 SPDYE5A6NIY4 337 aa7.94□□□□□ -1.14
CBWD1-215ENST00000487575 SPDYE3A6NKU9 549 aa7.94□□□□□ -1.14
CBWD1-215ENST00000487575 GCOM1H8Y6P7 765 aaPredicted RBP7.94□□□□□ -1.14
CBWD1-215ENST00000487575 CXCL11O14625 94 aa7.94□□□□□ -1.14
CBWD1-215ENST00000487575 NEMFO60524 1076 aa7.94□□□□□ -1.14
CBWD1-215ENST00000487575 ZNF202O95125 648 aa7.94□□□□□ -1.14
CBWD1-215ENST00000487575 POLR2MP0CAP2 368 aa7.94□□□□□ -1.14
CBWD1-215ENST00000487575 GCFC2P16383 781 aaKnown RBP7.94□□□□□ -1.14
CBWD1-215ENST00000487575 SYKP43405 635 aa7.94□□□□□ -1.14
CBWD1-215ENST00000487575 USP11P51784 963 aa7.94□□□□□ -1.14
CBWD1-215ENST00000487575 COG2Q14746 738 aa7.94□□□□□ -1.14
CBWD1-215ENST00000487575 CAMK4Q16566 473 aa7.94□□□□□ -1.14
CBWD1-215ENST00000487575 MAP1SQ66K74 1059 aaPredicted RBP7.94□□□□□ -1.14
CBWD1-215ENST00000487575 CATSPERGQ6ZRH7 1159 aa7.94□□□□□ -1.14
CBWD1-215ENST00000487575 TIGD1Q96MW7 591 aa7.94□□□□□ -1.14
CBWD1-215ENST00000487575 ANO3Q9BYT9 981 aa7.94□□□□□ -1.14
CBWD1-215ENST00000487575 CSRNP2Q9H175 543 aa7.94□□□□□ -1.14
CBWD1-215ENST00000487575 ELP3Q9H9T3 547 aa7.94□□□□□ -1.14
CBWD1-215ENST00000487575 HOXC10Q9NYD6 342 aa7.94□□□□□ -1.14
CBWD1-215ENST00000487575 KCNH3Q9ULD8 1083 aa7.94□□□□□ -1.14
CBWD1-215ENST00000487575 CCPG1Q9ULG6 757 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms