RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 TMEM240Q5SV17 173 aa14.33□□□□□ -0.12
VPS16-208ENST00000487461 SLC30A10Q6XR72 485 aa14.33□□□□□ -0.12
VPS16-208ENST00000487461 DGKHQ86XP1 1220 aa14.33□□□□□ -0.12
VPS16-208ENST00000487461 WDR11Q9BZH6 1224 aa14.33□□□□□ -0.12
VPS16-208ENST00000487461 PPP1R12CQ9BZL4 782 aa14.33□□□□□ -0.12
VPS16-208ENST00000487461 UBA5Q9GZZ9 404 aa14.33□□□□□ -0.12
VPS16-208ENST00000487461 CPVLQ9H3G5 476 aa14.33□□□□□ -0.12
VPS16-208ENST00000487461 DIAPH3Q9NSV4 1193 aa14.33□□□□□ -0.12
VPS16-208ENST00000487461 RBM47A0AV96 593 aaKnown RBP14.32□□□□□ -0.12
VPS16-208ENST00000487461 KDM4AO75164 1064 aa14.32□□□□□ -0.12
VPS16-208ENST00000487461 ACRP10323 421 aa14.32□□□□□ -0.12
VPS16-208ENST00000487461 CYP2C18P33260 490 aa14.32□□□□□ -0.12
VPS16-208ENST00000487461 PSMC6P62333 389 aa14.32□□□□□ -0.12
VPS16-208ENST00000487461 RPS6P62753 249 aaKnown RBP14.32□□□□□ -0.12
VPS16-208ENST00000487461 RNF207Q6ZRF8 634 aa14.32□□□□□ -0.12
VPS16-208ENST00000487461 TMEM199Q8N511 208 aa14.32□□□□□ -0.12
VPS16-208ENST00000487461 MYLIPQ8WY64 445 aa14.32□□□□□ -0.12
VPS16-208ENST00000487461 ANKS1AQ92625 1134 aa14.32□□□□□ -0.12
VPS16-208ENST00000487461 PNMA2Q9UL42 364 aa14.32□□□□□ -0.12
VPS16-208ENST00000487461 LOC102724159A0A0B4J2E5 919 aa14.31□□□□□ -0.12
VPS16-208ENST00000487461 PWP2Q15269 919 aaKnown RBP14.31□□□□□ -0.12
VPS16-208ENST00000487461 GPATCH4Q5T3I0 446 aaKnown RBP14.31□□□□□ -0.12
VPS16-208ENST00000487461 RASIP1Q5U651 963 aa14.31□□□□□ -0.12
VPS16-208ENST00000487461 ZNF365Q70YC5 407 aa14.31□□□□□ -0.12
VPS16-208ENST00000487461 TRPV6Q9H1D0 765 aa14.31□□□□□ -0.12
VPS16-208ENST00000487461 ZSWIM5Q9P217 1185 aa14.31□□□□□ -0.12
VPS16-208ENST00000487461 WDR19Q8NEZ3 1342 aa14.31□□□□□ -0.12
VPS16-208ENST00000487461 GRXCR1A8MXD5 290 aa14.3□□□□□ -0.12
VPS16-208ENST00000487461 B4E1Z4 1266 aa14.3□□□□□ -0.12
VPS16-208ENST00000487461 HIP1O00291 1037 aa14.3□□□□□ -0.12
VPS16-208ENST00000487461 B4GALT4O60513 344 aa14.3□□□□□ -0.12
VPS16-208ENST00000487461 CCDC178Q5BJE1 867 aa14.3□□□□□ -0.12
VPS16-208ENST00000487461 IQCA1Q86XH1 822 aa14.3□□□□□ -0.12
VPS16-208ENST00000487461 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.3□□□□□ -0.12
VPS16-208ENST00000487461 PNMA1Q8ND90 353 aa14.3□□□□□ -0.12
VPS16-208ENST00000487461 TBC1D5Q92609 795 aa14.3□□□□□ -0.12
VPS16-208ENST00000487461 ZSCAN10Q96SZ4 725 aaPredicted RBP14.3□□□□□ -0.12
VPS16-208ENST00000487461 DSCC1Q9BVC3 393 aa14.3□□□□□ -0.12
VPS16-208ENST00000487461 LCTP09848 1927 aa14.3□□□□□ -0.12
VPS16-208ENST00000487461 UMODL1Q5DID0 1318 aa14.3□□□□□ -0.12
VPS16-208ENST00000487461 CUL9Q8IWT3 2517 aa14.29□□□□□ -0.12
VPS16-208ENST00000487461 TMEM265A0A087WTH1 108 aa14.29□□□□□ -0.12
VPS16-208ENST00000487461 EDNRBP24530 442 aa14.29□□□□□ -0.12
VPS16-208ENST00000487461 DNAJB2P25686 324 aa14.29□□□□□ -0.12
VPS16-208ENST00000487461 NT5C2P49902 561 aa14.29□□□□□ -0.12
VPS16-208ENST00000487461 PDE4DQ08499 809 aa14.29□□□□□ -0.12
VPS16-208ENST00000487461 GRIN2CQ14957 1233 aa14.29□□□□□ -0.12
VPS16-208ENST00000487461 USH1GQ495M9 461 aa14.29□□□□□ -0.12
VPS16-208ENST00000487461 ADGRF4Q8IZF3 695 aa14.29□□□□□ -0.12
VPS16-208ENST00000487461 ENAHQ8N8S7 591 aaPredicted RBP14.29□□□□□ -0.12
VPS16-208ENST00000487461 RGS22Q8NE09 1264 aa14.29□□□□□ -0.12
VPS16-208ENST00000487461 DNERQ8NFT8 737 aa14.29□□□□□ -0.12
VPS16-208ENST00000487461 MAFAQ8NHW3 353 aaPredicted RBP14.29□□□□□ -0.12
VPS16-208ENST00000487461 NOC4LQ9BVI4 516 aaKnown RBP14.29□□□□□ -0.12
VPS16-208ENST00000487461 SEZ6LQ9BYH1 1024 aa14.29□□□□□ -0.12
VPS16-208ENST00000487461 IL25Q9H293 177 aa14.29□□□□□ -0.12
VPS16-208ENST00000487461 HIPK3Q9H422 1215 aa14.29□□□□□ -0.12
VPS16-208ENST00000487461 KAT14Q9H8E8 782 aa14.29□□□□□ -0.12
VPS16-208ENST00000487461 IL23AQ9NPF7 189 aa14.29□□□□□ -0.12
VPS16-208ENST00000487461 LRRC37A2A6NM11 1700 aa14.28□□□□□ -0.12
VPS16-208ENST00000487461 MYL3P08590 195 aa14.28□□□□□ -0.12
VPS16-208ENST00000487461 PDE4AP27815 886 aa14.28□□□□□ -0.12
VPS16-208ENST00000487461 PBX2P40425 430 aa14.28□□□□□ -0.12
VPS16-208ENST00000487461 CCL23P55773 120 aa14.28□□□□□ -0.12
VPS16-208ENST00000487461 PURAQ00577 322 aaKnown RBP14.28□□□□□ -0.12
VPS16-208ENST00000487461 CDC37Q16543 378 aaPredicted RBP14.28□□□□□ -0.12
VPS16-208ENST00000487461 IMMTQ16891 758 aaKnown RBP14.28□□□□□ -0.12
VPS16-208ENST00000487461 OR6J1Q8NGC5 347 aa14.28□□□□□ -0.12
VPS16-208ENST00000487461 HERVK_113Q902F9 699 aa14.28□□□□□ -0.12
VPS16-208ENST00000487461 COPS5Q92905 334 aa14.28□□□□□ -0.12
VPS16-208ENST00000487461 ALDH8A1Q9H2A2 487 aaPredicted RBP14.28□□□□□ -0.12
VPS16-208ENST00000487461 VAT1LQ9HCJ6 419 aa14.28□□□□□ -0.12
VPS16-208ENST00000487461 POLR3EQ9NVU0 708 aa14.28□□□□□ -0.12
VPS16-208ENST00000487461 CTNNA3Q9UI47 895 aa14.28□□□□□ -0.12
VPS16-208ENST00000487461 FGBP02675 491 aa14.27□□□□□ -0.13
VPS16-208ENST00000487461 CPT1AP50416 773 aa14.27□□□□□ -0.13
VPS16-208ENST00000487461 PSRC1Q6PGN9 363 aaPredicted RBP14.27□□□□□ -0.13
VPS16-208ENST00000487461 SYTL5Q8TDW5 730 aaPredicted RBP14.27□□□□□ -0.13
VPS16-208ENST00000487461 TIFAQ96CG3 184 aa14.27□□□□□ -0.13
VPS16-208ENST00000487461 VWCEQ96DN2 955 aa14.27□□□□□ -0.13
VPS16-208ENST00000487461 TAAR1Q96RJ0 339 aa14.27□□□□□ -0.13
VPS16-208ENST00000487461 PBX4Q9BYU1 374 aa14.27□□□□□ -0.13
VPS16-208ENST00000487461 KRT23Q9C075 422 aa14.27□□□□□ -0.13
VPS16-208ENST00000487461 WNT8AQ9H1J5 351 aa14.27□□□□□ -0.13
VPS16-208ENST00000487461 ZNF576Q9H609 170 aa14.27□□□□□ -0.13
VPS16-208ENST00000487461 TRMT13Q9NUP7 481 aaKnown RBP14.27□□□□□ -0.13
VPS16-208ENST00000487461 CXXC1Q9P0U4 656 aaPredicted RBP14.27□□□□□ -0.13
VPS16-208ENST00000487461 SUPT16HQ9Y5B9 1047 aaKnown RBP14.27□□□□□ -0.13
VPS16-208ENST00000487461 TNKSO95271 1327 aa14.26□□□□□ -0.13
VPS16-208ENST00000487461 NKRFO15226 690 aaKnown RBP eCLIP14.26□□□□□ -0.13
VPS16-208ENST00000487461 ARIH2O95376 493 aa14.26□□□□□ -0.13
VPS16-208ENST00000487461 PARP1P09874 1014 aaKnown RBP14.26□□□□□ -0.13
VPS16-208ENST00000487461 TXNP10599 105 aaKnown RBP14.26□□□□□ -0.13
VPS16-208ENST00000487461 FOSL2P15408 326 aa14.26□□□□□ -0.13
VPS16-208ENST00000487461 PPP2R5BQ15173 497 aa14.26□□□□□ -0.13
VPS16-208ENST00000487461 QRICH1Q2TAL8 776 aa14.26□□□□□ -0.13
VPS16-208ENST00000487461 ASPRV1Q53RT3 343 aa14.26□□□□□ -0.13
VPS16-208ENST00000487461 SCFD2Q8WU76 684 aa14.26□□□□□ -0.13
VPS16-208ENST00000487461 PPP1R13LQ8WUF5 828 aa14.26□□□□□ -0.13
VPS16-208ENST00000487461 MPHOSPH6Q99547 160 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms