RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 USH1GQ495M9 461 aa13.5□□□□□ -0.25
CLIP2-207ENST00000487447 MFSD14CQ5VZR4 134 aa13.5□□□□□ -0.25
CLIP2-207ENST00000487447 SLC30A10Q6XR72 485 aa13.5□□□□□ -0.25
CLIP2-207ENST00000487447 RNF207Q6ZRF8 634 aa13.5□□□□□ -0.25
CLIP2-207ENST00000487447 HOMER1Q86YM7 354 aa13.5□□□□□ -0.25
CLIP2-207ENST00000487447 CMTR1Q8N1G2 835 aaKnown RBP13.5□□□□□ -0.25
CLIP2-207ENST00000487447 IL27Q8NEV9 243 aa13.5□□□□□ -0.25
CLIP2-207ENST00000487447 RRP36Q96EU6 259 aaKnown RBP13.5□□□□□ -0.25
CLIP2-207ENST00000487447 BACH2Q9BYV9 841 aa13.5□□□□□ -0.25
CLIP2-207ENST00000487447 UNC93B1Q9H1C4 597 aa13.5□□□□□ -0.25
CLIP2-207ENST00000487447 PCDHA1Q9Y5I3 950 aa13.5□□□□□ -0.25
CLIP2-207ENST00000487447 IFNAR1P17181 557 aa13.49□□□□□ -0.25
CLIP2-207ENST00000487447 EDNRBP24530 442 aa13.49□□□□□ -0.25
CLIP2-207ENST00000487447 CYP2C19P33261 490 aa13.49□□□□□ -0.25
CLIP2-207ENST00000487447 ADD1P35611 737 aaKnown RBP13.49□□□□□ -0.25
CLIP2-207ENST00000487447 AK2P54819 239 aa13.49□□□□□ -0.25
CLIP2-207ENST00000487447 RPS6P62753 249 aaKnown RBP13.49□□□□□ -0.25
CLIP2-207ENST00000487447 CNTN2Q02246 1040 aa13.49□□□□□ -0.25
CLIP2-207ENST00000487447 NSMFQ6X4W1 530 aa13.49□□□□□ -0.25
CLIP2-207ENST00000487447 MCF2L2Q86YR7 1114 aa13.49□□□□□ -0.25
CLIP2-207ENST00000487447 TEX2Q8IWB9 1127 aa13.49□□□□□ -0.25
CLIP2-207ENST00000487447 TRPV1Q8NER1 839 aa13.49□□□□□ -0.25
CLIP2-207ENST00000487447 KATNBL1Q9H079 304 aa13.49□□□□□ -0.25
CLIP2-207ENST00000487447 CRISPLD2Q9H0B8 497 aa13.49□□□□□ -0.25
CLIP2-207ENST00000487447 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLIP2-207ENST00000487447 HMX1Q9NP08 348 aaPredicted RBP13.49□□□□□ -0.25
CLIP2-207ENST00000487447 COLQQ9Y215 455 aaPredicted RBP13.49□□□□□ -0.25
CLIP2-207ENST00000487447 hCG_1984214I3L0E3 225 aa13.48□□□□□ -0.25
CLIP2-207ENST00000487447 SNAI1O95863 264 aaPredicted RBP13.48□□□□□ -0.25
CLIP2-207ENST00000487447 GJA8P48165 433 aa13.48□□□□□ -0.25
CLIP2-207ENST00000487447 ZNF713Q8N859 430 aaPredicted RBP13.48□□□□□ -0.25
CLIP2-207ENST00000487447 DNERQ8NFT8 737 aa13.48□□□□□ -0.25
CLIP2-207ENST00000487447 SYTL5Q8TDW5 730 aaPredicted RBP13.48□□□□□ -0.25
CLIP2-207ENST00000487447 TBC1D32Q96NH3 1257 aa13.48□□□□□ -0.25
CLIP2-207ENST00000487447 RNF26Q9BY78 433 aaPredicted RBP13.48□□□□□ -0.25
CLIP2-207ENST00000487447 COL20A1Q9P218 1284 aa13.48□□□□□ -0.25
CLIP2-207ENST00000487447 RBM27Q9P2N5 1060 aaKnown RBP13.48□□□□□ -0.25
CLIP2-207ENST00000487447 BIN2Q9UBW5 565 aaPredicted RBP13.48□□□□□ -0.25
CLIP2-207ENST00000487447 ADD3Q9UEY8 706 aaKnown RBP13.48□□□□□ -0.25
CLIP2-207ENST00000487447 SEC63Q9UGP8 760 aaKnown RBP13.48□□□□□ -0.25
CLIP2-207ENST00000487447 TPCN1Q9ULQ1 816 aa13.48□□□□□ -0.25
CLIP2-207ENST00000487447 KIAA1217Q5T5P2 1943 aa13.47□□□□□ -0.25
CLIP2-207ENST00000487447 FRMPD4Q14CM0 1322 aa13.47□□□□□ -0.25
CLIP2-207ENST00000487447 ASB14A6NK59 587 aa13.47□□□□□ -0.25
CLIP2-207ENST00000487447 H0YGN5 161 aa13.47□□□□□ -0.25
CLIP2-207ENST00000487447 PIK3CDO00329 1044 aa13.47□□□□□ -0.25
CLIP2-207ENST00000487447 PRPF3O43395 683 aaKnown RBP13.47□□□□□ -0.25
CLIP2-207ENST00000487447 PFKFB2O60825 505 aa13.47□□□□□ -0.25
CLIP2-207ENST00000487447 ZNF865P0CJ78 1059 aaPredicted RBP13.47□□□□□ -0.25
CLIP2-207ENST00000487447 CCND3P30281 292 aaPredicted RBP13.47□□□□□ -0.25
CLIP2-207ENST00000487447 ALDH5A1P51649 535 aaPredicted RBP13.47□□□□□ -0.25
CLIP2-207ENST00000487447 NEK4P51957 841 aa13.47□□□□□ -0.25
CLIP2-207ENST00000487447 LHX8Q68G74 356 aa13.47□□□□□ -0.25
CLIP2-207ENST00000487447 PPP1R18Q6NYC8 613 aa13.47□□□□□ -0.25
CLIP2-207ENST00000487447 TBC1D5Q92609 795 aa13.47□□□□□ -0.25
CLIP2-207ENST00000487447 SHISA4Q96DD7 197 aa13.47□□□□□ -0.25
CLIP2-207ENST00000487447 RNF208Q9H0X6 261 aa13.47□□□□□ -0.25
CLIP2-207ENST00000487447 UPF2Q9HAU5 1272 aaKnown RBP13.47□□□□□ -0.25
CLIP2-207ENST00000487447 PTPDC1A2A3K4 754 aa13.46□□□□□ -0.25
CLIP2-207ENST00000487447 SEPT4O43236 478 aa13.46□□□□□ -0.25
CLIP2-207ENST00000487447 MSCO60682 206 aa13.46□□□□□ -0.25
CLIP2-207ENST00000487447 SGPL1O95470 568 aa13.46□□□□□ -0.25
CLIP2-207ENST00000487447 PKN1Q16512 942 aa13.46□□□□□ -0.25
CLIP2-207ENST00000487447 PFKFB3Q16875 520 aaPredicted RBP13.46□□□□□ -0.25
CLIP2-207ENST00000487447 WWC2Q6AWC2 1192 aa13.46□□□□□ -0.25
CLIP2-207ENST00000487447 ARMCX2Q7L311 632 aa13.46□□□□□ -0.25
CLIP2-207ENST00000487447 U2AF1L4Q8WU68 220 aaKnown RBP13.46□□□□□ -0.25
CLIP2-207ENST00000487447 PURBQ96QR8 312 aaKnown RBP13.46□□□□□ -0.25
CLIP2-207ENST00000487447 ABHD16BQ9H3Z7 469 aa13.46□□□□□ -0.25
CLIP2-207ENST00000487447 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.46□□□□□ -0.25
CLIP2-207ENST00000487447 MKI67P46013 3256 aaKnown RBP13.46□□□□□ -0.25
CLIP2-207ENST00000487447 STXBP3O00186 592 aa13.45□□□□□ -0.26
CLIP2-207ENST00000487447 MEIS2O14770 477 aa13.45□□□□□ -0.26
CLIP2-207ENST00000487447 CALML3P27482 149 aa13.45□□□□□ -0.26
CLIP2-207ENST00000487447 FXR1P51114 621 aaKnown RBP eCLIP13.45□□□□□ -0.26
CLIP2-207ENST00000487447 CCT2P78371 535 aaKnown RBP13.45□□□□□ -0.26
CLIP2-207ENST00000487447 SCRN1Q12765 414 aa13.45□□□□□ -0.26
CLIP2-207ENST00000487447 RABEP1Q15276 862 aa13.45□□□□□ -0.26
CLIP2-207ENST00000487447 TYW1BQ6NUM6 668 aa13.45□□□□□ -0.26
CLIP2-207ENST00000487447 UBE2Q1Q7Z7E8 422 aa13.45□□□□□ -0.26
CLIP2-207ENST00000487447 CCDC82Q8N4S0 544 aa13.45□□□□□ -0.26
CLIP2-207ENST00000487447 DPF3Q92784 378 aa13.45□□□□□ -0.26
CLIP2-207ENST00000487447 NCOA5Q9HCD5 579 aaKnown RBP13.45□□□□□ -0.26
CLIP2-207ENST00000487447 BARHL2Q9NY43 387 aa13.45□□□□□ -0.26
CLIP2-207ENST00000487447 DDX20Q9UHI6 824 aaKnown RBP13.45□□□□□ -0.26
CLIP2-207ENST00000487447 OGDHLQ9ULD0 1010 aa13.45□□□□□ -0.26
CLIP2-207ENST00000487447 NAP1L2Q9ULW6 460 aaPredicted RBP13.45□□□□□ -0.26
CLIP2-207ENST00000487447 V9GY48 417 aaPredicted RBP13.45□□□□□ -0.26
CLIP2-207ENST00000487447 STK36Q9NRP7 1315 aa13.44□□□□□ -0.26
CLIP2-207ENST00000487447 hCG_1642624A0A1W2PR95 340 aa13.44□□□□□ -0.26
CLIP2-207ENST00000487447 RBM47A0AV96 593 aaKnown RBP13.44□□□□□ -0.26
CLIP2-207ENST00000487447 ESYT2A0FGR8 921 aa13.44□□□□□ -0.26
CLIP2-207ENST00000487447 GCOM1H8Y6P7 765 aaPredicted RBP13.44□□□□□ -0.26
CLIP2-207ENST00000487447 LARGE1O95461 756 aa13.44□□□□□ -0.26
CLIP2-207ENST00000487447 CFBP00751 764 aa13.44□□□□□ -0.26
CLIP2-207ENST00000487447 POLR2MP0CAP2 368 aa13.44□□□□□ -0.26
CLIP2-207ENST00000487447 SCG2P13521 617 aa13.44□□□□□ -0.26
CLIP2-207ENST00000487447 ACVR2BQ13705 512 aa13.44□□□□□ -0.26
CLIP2-207ENST00000487447 ME3Q16798 604 aa13.44□□□□□ -0.26
CLIP2-207ENST00000487447 PRAMEF19Q5SWL8 479 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms