RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 HTRA4P83105 476 aaPredicted RBP14.17□□□□□ -0.14
TRIM56-204ENST00000487252 TCTN1Q2MV58 587 aa14.17□□□□□ -0.14
TRIM56-204ENST00000487252 EPC2Q52LR7 807 aa14.17□□□□□ -0.14
TRIM56-204ENST00000487252 TMEM63BQ5T3F8 832 aa14.17□□□□□ -0.14
TRIM56-204ENST00000487252 IQSEC1Q6DN90 963 aa14.17□□□□□ -0.14
TRIM56-204ENST00000487252 TAPT1Q6NXT6 567 aa14.17□□□□□ -0.14
TRIM56-204ENST00000487252 NFRKBQ6P4R8 1299 aa14.17□□□□□ -0.14
TRIM56-204ENST00000487252 CNKSR3Q6P9H4 555 aa14.17□□□□□ -0.14
TRIM56-204ENST00000487252 ADSSL1Q8N142 457 aa14.17□□□□□ -0.14
TRIM56-204ENST00000487252 ZNF512BQ96KM6 892 aaPredicted RBP14.17□□□□□ -0.14
TRIM56-204ENST00000487252 INSL6Q9Y581 213 aa14.17□□□□□ -0.14
TRIM56-204ENST00000487252 EP300Q09472 2414 aaPredicted RBP14.17□□□□□ -0.14
TRIM56-204ENST00000487252 AKR1B1P15121 316 aa14.16□□□□□ -0.14
TRIM56-204ENST00000487252 CNTN2Q02246 1040 aa14.16□□□□□ -0.14
TRIM56-204ENST00000487252 FAM83BQ5T0W9 1011 aa14.16□□□□□ -0.14
TRIM56-204ENST00000487252 EP400NLQ6ZTU2 488 aa14.16□□□□□ -0.14
TRIM56-204ENST00000487252 ANKRD35Q8N283 1001 aa14.16□□□□□ -0.14
TRIM56-204ENST00000487252 AFAP1L1Q8TED9 768 aa14.16□□□□□ -0.14
TRIM56-204ENST00000487252 NKD2Q969F2 451 aaPredicted RBP14.16□□□□□ -0.14
TRIM56-204ENST00000487252 RMDN1Q96DB5 314 aa14.16□□□□□ -0.14
TRIM56-204ENST00000487252 SAMD11Q96NU1 681 aa14.16□□□□□ -0.14
TRIM56-204ENST00000487252 CTAGE1Q96RT6 745 aa14.16□□□□□ -0.14
TRIM56-204ENST00000487252 SLF1Q9BQI6 1058 aa14.16□□□□□ -0.14
TRIM56-204ENST00000487252 RIOK1Q9BRS2 568 aaKnown RBP14.16□□□□□ -0.14
TRIM56-204ENST00000487252 PDGFCQ9NRA1 345 aa14.16□□□□□ -0.14
TRIM56-204ENST00000487252 POLR3EQ9NVU0 708 aa14.16□□□□□ -0.14
TRIM56-204ENST00000487252 EYA4O95677 639 aa14.15□□□□□ -0.14
TRIM56-204ENST00000487252 POLR3DP05423 398 aaPredicted RBP14.15□□□□□ -0.14
TRIM56-204ENST00000487252 PTPN11Q06124 597 aaPredicted RBP14.15□□□□□ -0.14
TRIM56-204ENST00000487252 MKRN4PQ13434 485 aaPredicted RBP14.15□□□□□ -0.14
TRIM56-204ENST00000487252 MTX1Q13505 466 aa14.15□□□□□ -0.14
TRIM56-204ENST00000487252 NBPF20Q3BBV1 942 aa14.15□□□□□ -0.14
TRIM56-204ENST00000487252 TMED8Q6PL24 325 aaPredicted RBP14.15□□□□□ -0.14
TRIM56-204ENST00000487252 DGLUCYQ7Z3D6 616 aa14.15□□□□□ -0.14
TRIM56-204ENST00000487252 CHST13Q8NET6 341 aa14.15□□□□□ -0.14
TRIM56-204ENST00000487252 SWAP70Q9UH65 585 aa14.15□□□□□ -0.14
TRIM56-204ENST00000487252 FBXO40Q9UH90 709 aa14.15□□□□□ -0.14
TRIM56-204ENST00000487252 MICAL3Q7RTP6 2002 aa14.15□□□□□ -0.14
TRIM56-204ENST00000487252 NLRC5Q86WI3 1866 aa14.14□□□□□ -0.15
TRIM56-204ENST00000487252 FRYLO94915 3013 aa14.14□□□□□ -0.15
TRIM56-204ENST00000487252 ASB14A6NK59 587 aa14.14□□□□□ -0.15
TRIM56-204ENST00000487252 NBNO60934 754 aa14.14□□□□□ -0.15
TRIM56-204ENST00000487252 EFCAB14O75071 495 aa14.14□□□□□ -0.15
TRIM56-204ENST00000487252 TBX10O75333 385 aa14.14□□□□□ -0.15
TRIM56-204ENST00000487252 PARNO95453 639 aaKnown RBP14.14□□□□□ -0.15
TRIM56-204ENST00000487252 EEF2P13639 858 aaKnown RBP14.14□□□□□ -0.15
TRIM56-204ENST00000487252 ZAP70P43403 619 aa14.14□□□□□ -0.15
TRIM56-204ENST00000487252 RBL2Q08999 1139 aa14.14□□□□□ -0.15
TRIM56-204ENST00000487252 HYAL1Q12794 435 aa14.14□□□□□ -0.15
TRIM56-204ENST00000487252 CLUL1Q15846 466 aa14.14□□□□□ -0.15
TRIM56-204ENST00000487252 CAGE1Q8TC20 777 aa14.14□□□□□ -0.15
TRIM56-204ENST00000487252 HDAC5Q9UQL6 1122 aa14.14□□□□□ -0.15
TRIM56-204ENST00000487252 RALGAPA2Q2PPJ7 1873 aa14.14□□□□□ -0.15
TRIM56-204ENST00000487252 CEP250Q9BV73 2442 aa14.13□□□□□ -0.15
TRIM56-204ENST00000487252 MAP1BP46821 2468 aaKnown RBP14.13□□□□□ -0.15
TRIM56-204ENST00000487252 GPM6BQ13491 265 aa14.13□□□□□ -0.15
TRIM56-204ENST00000487252 DUSP28Q4G0W2 176 aa14.13□□□□□ -0.15
TRIM56-204ENST00000487252 PRPF38AQ8NAV1 312 aaKnown RBP14.13□□□□□ -0.15
TRIM56-204ENST00000487252 MTG1Q9BT17 334 aaPredicted RBP14.13□□□□□ -0.15
TRIM56-204ENST00000487252 SLC38A10Q9HBR0 1119 aa14.13□□□□□ -0.15
TRIM56-204ENST00000487252 GOPCQ9HD26 462 aa14.13□□□□□ -0.15
TRIM56-204ENST00000487252 USP24Q9UPU5 2620 aa14.12□□□□□ -0.15
TRIM56-204ENST00000487252 SRGAP3O43295 1099 aa14.12□□□□□ -0.15
TRIM56-204ENST00000487252 SELPP16109 830 aa14.12□□□□□ -0.15
TRIM56-204ENST00000487252 TTC39AQ5SRH9 613 aa14.12□□□□□ -0.15
TRIM56-204ENST00000487252 MCTP2Q6DN12 878 aa14.12□□□□□ -0.15
TRIM56-204ENST00000487252 FRMD5Q7Z6J6 570 aa14.12□□□□□ -0.15
TRIM56-204ENST00000487252 MORC4Q8TE76 937 aa14.12□□□□□ -0.15
TRIM56-204ENST00000487252 MSLNLQ96KJ4 702 aa14.12□□□□□ -0.15
TRIM56-204ENST00000487252 CCDC17Q96LX7 622 aa14.12□□□□□ -0.15
TRIM56-204ENST00000487252 KANSL2Q9H9L4 492 aa14.12□□□□□ -0.15
TRIM56-204ENST00000487252 MCM9Q9NXL9 1143 aa14.12□□□□□ -0.15
TRIM56-204ENST00000487252 CD207Q9UJ71 328 aa14.12□□□□□ -0.15
TRIM56-204ENST00000487252 GREB1LQ9C091 1923 aaPredicted RBP14.11□□□□□ -0.15
TRIM56-204ENST00000487252 USP17L12C9JPN9 530 aa14.11□□□□□ -0.15
TRIM56-204ENST00000487252 USP17L21D6R901 530 aa14.11□□□□□ -0.15
TRIM56-204ENST00000487252 KDM4AO75164 1064 aa14.11□□□□□ -0.15
TRIM56-204ENST00000487252 OAZ1P54368 228 aa14.11□□□□□ -0.15
TRIM56-204ENST00000487252 FAM47CQ5HY64 1035 aa14.11□□□□□ -0.15
TRIM56-204ENST00000487252 CCDC158Q5M9N0 1113 aa14.11□□□□□ -0.15
TRIM56-204ENST00000487252 FAM117BQ6P1L5 589 aa14.11□□□□□ -0.15
TRIM56-204ENST00000487252 CPXCR1Q8N123 301 aa14.11□□□□□ -0.15
TRIM56-204ENST00000487252 SSH1Q8WYL5 1049 aa14.11□□□□□ -0.15
TRIM56-204ENST00000487252 CRBNQ96SW2 442 aa14.11□□□□□ -0.15
TRIM56-204ENST00000487252 RAVER2Q9HCJ3 691 aaKnown RBP14.11□□□□□ -0.15
TRIM56-204ENST00000487252 GPR108Q9NPR9 543 aa14.11□□□□□ -0.15
TRIM56-204ENST00000487252 DDX49Q9Y6V7 483 aaKnown RBP14.11□□□□□ -0.15
TRIM56-204ENST00000487252 LCTP09848 1927 aa14.11□□□□□ -0.15
TRIM56-204ENST00000487252 IDH1O75874 414 aaKnown RBP14.1□□□□□ -0.15
TRIM56-204ENST00000487252 PDGFBP01127 241 aaPredicted RBP14.1□□□□□ -0.15
TRIM56-204ENST00000487252 ICAM3P32942 547 aa14.1□□□□□ -0.15
TRIM56-204ENST00000487252 CPT1AP50416 773 aa14.1□□□□□ -0.15
TRIM56-204ENST00000487252 IKBKEQ14164 716 aa14.1□□□□□ -0.15
TRIM56-204ENST00000487252 LRRC8DQ7L1W4 858 aa14.1□□□□□ -0.15
TRIM56-204ENST00000487252 FBXO11Q86XK2 927 aa14.1□□□□□ -0.15
TRIM56-204ENST00000487252 FBXO16Q8IX29 292 aaPredicted RBP14.1□□□□□ -0.15
TRIM56-204ENST00000487252 TMEM192Q8IY95 271 aa14.1□□□□□ -0.15
TRIM56-204ENST00000487252 CCDC155Q8N6L0 562 aa14.1□□□□□ -0.15
TRIM56-204ENST00000487252 DHX38Q92620 1227 aaKnown RBP14.1□□□□□ -0.15
TRIM56-204ENST00000487252 DYNLL2Q96FJ2 89 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms