RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 LIG4P49917 911 aa16.09■□□□□ 0.17
EPHB4-206ENST00000487222 WDR17Q8IZU2 1322 aa16.09■□□□□ 0.17
EPHB4-206ENST00000487222 SEC31AO94979 1220 aaKnown RBP16.08■□□□□ 0.17
EPHB4-206ENST00000487222 GOLGA8FQ08AF8 430 aa16.08■□□□□ 0.17
EPHB4-206ENST00000487222 GOLGA8DPQ0D2H9 430 aa16.08■□□□□ 0.17
EPHB4-206ENST00000487222 MAN2A1Q16706 1144 aa16.08■□□□□ 0.17
EPHB4-206ENST00000487222 XKR9Q5GH70 373 aa16.08■□□□□ 0.17
EPHB4-206ENST00000487222 ARMCX5Q6P1M9 558 aa16.08■□□□□ 0.17
EPHB4-206ENST00000487222 KRT26Q7Z3Y9 468 aa16.08■□□□□ 0.17
EPHB4-206ENST00000487222 CCDC170Q8IYT3 715 aa16.08■□□□□ 0.17
EPHB4-206ENST00000487222 GJA10Q969M2 543 aa16.08■□□□□ 0.17
EPHB4-206ENST00000487222 TEKT3Q9BXF9 490 aa16.08■□□□□ 0.17
EPHB4-206ENST00000487222 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.08■□□□□ 0.17
EPHB4-206ENST00000487222 ST7Q9NRC1 585 aa16.08■□□□□ 0.17
EPHB4-206ENST00000487222 LARGE1O95461 756 aa16.08■□□□□ 0.16
EPHB4-206ENST00000487222 KIAA1024Q9UPX6 916 aa16.08■□□□□ 0.16
EPHB4-206ENST00000487222 PCDHA1Q9Y5I3 950 aa16.08■□□□□ 0.16
EPHB4-206ENST00000487222 CERKLQ49MI3 558 aaPredicted RBP16.08■□□□□ 0.16
EPHB4-206ENST00000487222 PLA2G4DQ86XP0 818 aa16.08■□□□□ 0.16
EPHB4-206ENST00000487222 FAM114A2Q9NRY5 505 aa16.08■□□□□ 0.16
EPHB4-206ENST00000487222 RNF14Q9UBS8 474 aa16.08■□□□□ 0.16
EPHB4-206ENST00000487222 CDK12Q9NYV4 1490 aaPredicted RBP16.08■□□□□ 0.16
EPHB4-206ENST00000487222 SH2B2O14492 632 aaPredicted RBP16.08■□□□□ 0.16
EPHB4-206ENST00000487222 ATF2P15336 505 aa16.08■□□□□ 0.16
EPHB4-206ENST00000487222 SLC8A1P32418 973 aa16.08■□□□□ 0.16
EPHB4-206ENST00000487222 CCT5P48643 541 aa16.08■□□□□ 0.16
EPHB4-206ENST00000487222 POLA2Q14181 598 aa16.08■□□□□ 0.16
EPHB4-206ENST00000487222 MAP3K21Q5TCX8 1036 aa16.08■□□□□ 0.16
EPHB4-206ENST00000487222 USPL1Q5W0Q7 1092 aa16.08■□□□□ 0.16
EPHB4-206ENST00000487222 ADAT2Q7Z6V5 191 aaKnown RBP16.08■□□□□ 0.16
EPHB4-206ENST00000487222 SPTLC3Q9NUV7 552 aa16.08■□□□□ 0.16
EPHB4-206ENST00000487222 TXNDC9O14530 226 aa16.07■□□□□ 0.16
EPHB4-206ENST00000487222 SLC12A2P55011 1212 aa16.07■□□□□ 0.16
EPHB4-206ENST00000487222 ICA1Q05084 483 aa16.07■□□□□ 0.16
EPHB4-206ENST00000487222 SLFN13Q68D06 897 aa16.07■□□□□ 0.16
EPHB4-206ENST00000487222 PROCA1Q8NCQ7 364 aaPredicted RBP16.07■□□□□ 0.16
EPHB4-206ENST00000487222 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.07■□□□□ 0.16
EPHB4-206ENST00000487222 GPHNQ9NQX3 736 aaPredicted RBP16.07■□□□□ 0.16
EPHB4-206ENST00000487222 RABGAP1Q9Y3P9 1069 aa16.07■□□□□ 0.16
EPHB4-206ENST00000487222 TESPA1A2RU30 521 aaPredicted RBP16.07■□□□□ 0.16
EPHB4-206ENST00000487222 FKBP3Q00688 224 aaKnown RBP16.07■□□□□ 0.16
EPHB4-206ENST00000487222 GPATCH4Q5T3I0 446 aaKnown RBP16.07■□□□□ 0.16
EPHB4-206ENST00000487222 SMYD4Q8IYR2 804 aaPredicted RBP16.07■□□□□ 0.16
EPHB4-206ENST00000487222 GLG1Q92896 1179 aa16.07■□□□□ 0.16
EPHB4-206ENST00000487222 TACO1Q9BSH4 297 aaKnown RBP16.07■□□□□ 0.16
EPHB4-206ENST00000487222 PREX2Q70Z35 1606 aa16.07■□□□□ 0.16
EPHB4-206ENST00000487222 FAM170AA1A519 330 aa16.07■□□□□ 0.16
EPHB4-206ENST00000487222 RWDD2AQ9UIY3 292 aa16.07■□□□□ 0.16
EPHB4-206ENST00000487222 ATP10DQ9P241 1426 aa16.07■□□□□ 0.16
EPHB4-206ENST00000487222 ZNF804BA4D1E1 1349 aa16.07■□□□□ 0.16
EPHB4-206ENST00000487222 SOS2Q07890 1332 aaPredicted RBP16.07■□□□□ 0.16
EPHB4-206ENST00000487222 A0A087WWV3 80 aa16.07■□□□□ 0.16
EPHB4-206ENST00000487222 SH3BP5O60239 455 aa16.07■□□□□ 0.16
EPHB4-206ENST00000487222 NR2F2P24468 414 aa16.07■□□□□ 0.16
EPHB4-206ENST00000487222 NSMCE1Q8WV22 266 aa16.07■□□□□ 0.16
EPHB4-206ENST00000487222 EPSTI1Q96J88 318 aa16.07■□□□□ 0.16
EPHB4-206ENST00000487222 PNMA2Q9UL42 364 aa16.07■□□□□ 0.16
EPHB4-206ENST00000487222 ATF7P17544 494 aaPredicted RBP16.06■□□□□ 0.16
EPHB4-206ENST00000487222 MAN1A1P33908 653 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 IRX4P78413 519 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 ASPRV1Q53RT3 343 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 KCTD16Q68DU8 428 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 UHMK1Q8TAS1 419 aaKnown RBP16.06■□□□□ 0.16
EPHB4-206ENST00000487222 PI4K2BQ8TCG2 481 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 PPP4R1Q8TF05 950 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 OSBP2Q969R2 916 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 CCDC127Q96BQ5 260 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 ANKARQ7Z5J8 1434 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 POLR2BP30876 1174 aaKnown RBP16.06■□□□□ 0.16
EPHB4-206ENST00000487222 TNFAIP1Q13829 316 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 ZBTB8OSQ8IWT0 167 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 MICAL1Q8TDZ2 1067 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 HAUS1Q96CS2 278 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 MIS12Q9H081 205 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 STK17AQ9UEE5 414 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 RIPOR2Q9Y4F9 1068 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 SRPRBQ9Y5M8 271 aaKnown RBP16.06■□□□□ 0.16
EPHB4-206ENST00000487222 KIF3CO14782 793 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 HEXIM1O94992 359 aaKnown RBP16.06■□□□□ 0.16
EPHB4-206ENST00000487222 NSFP46459 744 aaKnown RBP16.06■□□□□ 0.16
EPHB4-206ENST00000487222 CYP4A11Q02928 519 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 PTPN12Q05209 780 aaKnown RBP16.06■□□□□ 0.16
EPHB4-206ENST00000487222 PTCH1Q13635 1447 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 NAA35Q5VZE5 725 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 MCF2L2Q86YR7 1114 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 CCDC17Q96LX7 622 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 AMNQ9BXJ7 453 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 COBLO75128 1261 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 GCFC2P16383 781 aaKnown RBP16.06■□□□□ 0.16
EPHB4-206ENST00000487222 LIFRP42702 1097 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 BPIFB4P59827 614 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 ZBED6P86452 979 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 NR5A1Q13285 461 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 MUM1Q2TAK8 710 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 ODR4Q5SWX8 454 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 BSPRYQ5W0U4 402 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 HINFPQ9BQA5 517 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 NOD1Q9Y239 953 aa16.06■□□□□ 0.16
EPHB4-206ENST00000487222 PRDM15P57071 1507 aaPredicted RBP16.06■□□□□ 0.16
EPHB4-206ENST00000487222 STAM2O75886 525 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms