RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 UBE2Q2LH0YL09 131 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 CD44P16070 742 aaKnown RBP8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 CTSWP56202 376 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 POLR2FP61218 127 aaKnown RBP8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 PDIA6Q15084 440 aa8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 MSL3Q8N5Y2 521 aaKnown RBP8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 GPKOWQ92917 476 aaPredicted RBP eCLIP8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 NOVA2Q9UNW9 492 aaKnown RBP8.45□□□□□ -1.06
COL6A4P1-202ENST00000487147 MROH5Q6ZUA9 1318 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 USP17L12C9JPN9 530 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 USP17L21D6R901 530 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 RGS16O15492 202 aaPredicted RBP8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 NCK2O43639 380 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 CTNND1O60716 968 aaKnown RBP8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 BMP6P22004 513 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 NONOQ15233 471 aaKnown RBP eCLIP8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 BICDL1Q6ZP65 573 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 RASGRP4Q8TDF6 673 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 CCT8L2Q96SF2 557 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 NAP1L3Q99457 506 aaPredicted RBP8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 EPN3Q9H201 632 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 DISC1Q9NRI5 854 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 CPSF2Q9P2I0 782 aaKnown RBP8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 DENND2AQ9ULE3 1009 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 A0A1W2PRG0 241 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 PPP1R3GB7ZBB8 358 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 FLOT1O75955 427 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 MYL1P05976 194 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 LSP1P33241 339 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 PCK1P35558 622 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 MAN2A1Q16706 1144 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 DCAF17Q5H9S7 520 aaPredicted RBP8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 DENND2CQ68D51 928 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 DZIP3Q86Y13 1208 aaKnown RBP8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 LCORLQ8N3X6 602 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 ZNF473Q8WTR7 871 aaKnown RBP8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 ATP6V1G3Q96LB4 118 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 TRIM7Q9C029 511 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 PLCB1Q9NQ66 1216 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 STK38LQ9Y2H1 464 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 SOS2Q07890 1332 aaPredicted RBP8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 ABCC12Q96J65 1359 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 GMNCA6NCL1 334 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 CETN3O15182 167 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 PLEKHA8P1O95397 391 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 TNNI2P48788 182 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 AARSP49588 968 aaKnown RBP eCLIP8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 CCDC65Q8IXS2 484 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 FBF1Q8TES7 1133 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 RRP36Q96EU6 259 aaKnown RBP8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 RAB17Q9H0T7 212 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 NDST4Q9H3R1 872 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 AGPAT5Q9NUQ2 364 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 PCDH11XQ9BZA7 1347 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 PCDH11YQ9BZA8 1340 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 DLG5Q8TDM6 1919 aa8.44□□□□□ -1.06
COL6A4P1-202ENST00000487147 DDAH1O94760 285 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 ELF1P32519 619 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 TECP42680 631 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 CALCOCO2Q13137 446 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 ARL6IP4Q66PJ3 421 aaKnown RBP8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 CROCCP2Q86T23 111 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 DNAJC10Q8IXB1 793 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 NELFCDQ8IXH7 590 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 FBXL16Q8N461 479 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 SNX29Q8TEQ0 813 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 TBC1D5Q92609 795 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 TRIM6Q9C030 488 aaPredicted RBP8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 COL15A1P39059 1388 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 SEC24CP53992 1094 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 SETDB1Q15047 1291 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 CDKAL1Q5VV42 579 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 TAOK1Q7L7X3 1001 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 KRT25Q7Z3Z0 450 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 PARP9Q8IXQ6 854 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 ZIM3Q96PE6 472 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 CUEDC2Q9H467 287 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 TBC1D7Q9P0N9 293 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 TCEAL9Q9UHQ7 104 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 TMEM110-MUSTN1A8MSY1 372 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 OR52Z1P0C646 297 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 ZNF76P36508 570 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 MDH1P40925 334 aaKnown RBP8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 SARSP49591 514 aaKnown RBP8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 TOB1P50616 345 aaPredicted RBP8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 BCAMP50895 628 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 BIRC2Q13490 618 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 PAPD7Q5XG87 772 aaKnown RBP8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 INTS8Q75QN2 995 aaKnown RBP8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 SYCE1Q8N0S2 351 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 RUBCNQ92622 972 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 ARL8AQ96BM9 186 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 SLC24A3Q9HC58 644 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 BAG3O95817 575 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 SYF2O95926 243 aaKnown RBP8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 IFNAR2P48551 515 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 MMP14P50281 582 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 HERC4Q5GLZ8 1057 aaPredicted RBP8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 MMGT1Q8N4V1 131 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms