RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 PIK3CDO00329 1044 aa9.78□□□□□ -0.84
NUDCD3-209ENST00000487118 MEIS2O14770 477 aa9.78□□□□□ -0.84
NUDCD3-209ENST00000487118 OPLAHO14841 1288 aa9.78□□□□□ -0.84
NUDCD3-209ENST00000487118 KINO60870 393 aaKnown RBP9.78□□□□□ -0.84
NUDCD3-209ENST00000487118 FDX1P10109 184 aa9.78□□□□□ -0.84
NUDCD3-209ENST00000487118 MCM7P33993 719 aa9.78□□□□□ -0.84
NUDCD3-209ENST00000487118 NF2P35240 595 aa9.78□□□□□ -0.84
NUDCD3-209ENST00000487118 PRPHP41219 470 aa9.78□□□□□ -0.84
NUDCD3-209ENST00000487118 IREB2P48200 963 aaKnown RBP9.78□□□□□ -0.84
NUDCD3-209ENST00000487118 CRYGNQ8WXF5 182 aa9.78□□□□□ -0.84
NUDCD3-209ENST00000487118 ZIC5Q96T25 663 aa9.78□□□□□ -0.84
NUDCD3-209ENST00000487118 CSRNP2Q9H175 543 aa9.78□□□□□ -0.84
NUDCD3-209ENST00000487118 RPAP3Q9H6T3 665 aaPredicted RBP9.78□□□□□ -0.84
NUDCD3-209ENST00000487118 FAM13BQ9NYF5 915 aa9.78□□□□□ -0.84
NUDCD3-209ENST00000487118 PNMA2Q9UL42 364 aa9.78□□□□□ -0.84
NUDCD3-209ENST00000487118 PPP1R9AQ9ULJ8 1098 aa9.78□□□□□ -0.84
NUDCD3-209ENST00000487118 ZNF536O15090 1300 aa9.78□□□□□ -0.84
NUDCD3-209ENST00000487118 USP17L15C9J2P7 530 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 USP17L13C9JLJ4 530 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 USP17L11C9JVI0 530 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 USP17L18D6R9N7 530 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 USP17L22D6RA61 530 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 USP17L17D6RBQ6 530 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 USP17L19D6RCP7 530 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 USP17L20D6RJB6 530 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 ZNF202O95125 648 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 FOSP01100 380 aaPredicted RBP9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 ICAM1P05362 532 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 GCFC2P16383 781 aaKnown RBP9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 SYKP43405 635 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 GHRHRQ02643 423 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 USP17L24Q0WX57 530 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 PRKG1Q13976 671 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 IL17AQ16552 155 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 USH1GQ495M9 461 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 PPP4R3AQ6IN85 833 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 USP17L6PQ6QN14 398 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 MOXD1Q6UVY6 613 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 ELOA2Q8IYF1 753 aaPredicted RBP9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 ANKRD13AQ8IZ07 590 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 MBOAT7Q96N66 472 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 P2RX7Q99572 595 aaKnown RBP9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 NAP1L4Q99733 375 aaKnown RBP9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 ANO3Q9BYT9 981 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 TMEM60Q9H2L4 133 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 TSPY26PQ9H489 355 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 SLC38A10Q9HBR0 1119 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 KCNH3Q9ULD8 1083 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 MRPL11Q9Y3B7 192 aaKnown RBP9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 CSADQ9Y600 493 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 MYPNQ86TC9 1320 aa9.77□□□□□ -0.85
NUDCD3-209ENST00000487118 RLFQ13129 1914 aa9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 LOC285556D6RIA3 1793 aa9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 CYP3A7-CYP3A51PA0A087WV96 503 aa9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 SPDYE5A6NIY4 337 aa9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 NEMFO60524 1076 aa9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 FLOT1O75955 427 aa9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 OR52Z1P0C646 297 aa9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 TAL1P17542 331 aaPredicted RBP9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 CYP3A7P24462 503 aa9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 DEKP35659 375 aaKnown RBP9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 LONP1P36776 959 aaKnown RBP9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 SREBF1P36956 1147 aa9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 MRE11P49959 708 aa9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 USP11P51784 963 aa9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 HMGCS2P54868 508 aa9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 PPATQ06203 517 aa9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 CAMK4Q16566 473 aa9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 LETM2Q2VYF4 491 aa9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 LDLRAD1Q5T700 205 aa9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 L1TD1Q5T7N2 865 aaKnown RBP9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 CCDC174Q6PII3 467 aa9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 ERO1BQ86YB8 467 aa9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 REPS2Q8NFH8 660 aa9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 TANGO6Q9C0B7 1094 aa9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 GRPEL1Q9HAV7 217 aa9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 TMOD4Q9NZQ9 345 aa9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 ADAMTS5Q9UNA0 930 aa9.76□□□□□ -0.85
NUDCD3-209ENST00000487118 VWA3AA6NCI4 1184 aa9.75□□□□□ -0.85
NUDCD3-209ENST00000487118 UNCXA6NJT0 531 aa9.75□□□□□ -0.85
NUDCD3-209ENST00000487118 CXCL11O14625 94 aa9.75□□□□□ -0.85
NUDCD3-209ENST00000487118 CCNT1O60563 726 aaKnown RBP9.75□□□□□ -0.85
NUDCD3-209ENST00000487118 ZBED4O75132 1171 aa9.75□□□□□ -0.85
NUDCD3-209ENST00000487118 TDP2O95551 362 aa9.75□□□□□ -0.85
NUDCD3-209ENST00000487118 CCDC192P0DO97 292 aa9.75□□□□□ -0.85
NUDCD3-209ENST00000487118 DSG3P32926 999 aa9.75□□□□□ -0.85
NUDCD3-209ENST00000487118 OAZ1P54368 228 aa9.75□□□□□ -0.85
NUDCD3-209ENST00000487118 SPECC1Q5M775 1068 aa9.75□□□□□ -0.85
NUDCD3-209ENST00000487118 DTHD1Q6ZMT9 781 aa9.75□□□□□ -0.85
NUDCD3-209ENST00000487118 KRBA2Q6ZNG9 492 aa9.75□□□□□ -0.85
NUDCD3-209ENST00000487118 CATSPERGQ6ZRH7 1159 aa9.75□□□□□ -0.85
NUDCD3-209ENST00000487118 USP49Q70CQ1 688 aa9.75□□□□□ -0.85
NUDCD3-209ENST00000487118 ARMC9Q7Z3E5 817 aa9.75□□□□□ -0.85
NUDCD3-209ENST00000487118 SAMD3Q8N6K7 520 aa9.75□□□□□ -0.85
NUDCD3-209ENST00000487118 CLEC4DQ8WXI8 215 aa9.75□□□□□ -0.85
NUDCD3-209ENST00000487118 SYMPKQ92797 1274 aaKnown RBP9.75□□□□□ -0.85
NUDCD3-209ENST00000487118 MTMR9Q96QG7 549 aa9.75□□□□□ -0.85
NUDCD3-209ENST00000487118 RBSNQ9H1K0 784 aa9.75□□□□□ -0.85
NUDCD3-209ENST00000487118 USP25Q9UHP3 1055 aa9.75□□□□□ -0.85
NUDCD3-209ENST00000487118 CCPG1Q9ULG6 757 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms