RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 GRIK3Q13003 919 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 CDC37Q16543 378 aaPredicted RBP11.8□□□□□ -0.52
CCDC171-208ENST00000486641 CFAP221Q4G0U5 840 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 LACTB2Q53H82 288 aaPredicted RBP11.8□□□□□ -0.52
CCDC171-208ENST00000486641 KLHDC7AQ5VTJ3 777 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 ANKLE2Q86XL3 938 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 UBAC1Q9BSL1 405 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 CNNM2Q9H8M5 875 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 TJP1Q07157 1748 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 SCN11AQ9UI33 1791 aa11.79□□□□□ -0.52
CCDC171-208ENST00000486641 DISP2A7MBM2 1401 aa11.79□□□□□ -0.52
CCDC171-208ENST00000486641 NKRFO15226 690 aaKnown RBP eCLIP11.79□□□□□ -0.52
CCDC171-208ENST00000486641 ZPR1O75312 459 aa11.79□□□□□ -0.52
CCDC171-208ENST00000486641 PHKG2P15735 406 aa11.79□□□□□ -0.52
CCDC171-208ENST00000486641 XBP1P17861 261 aa11.79□□□□□ -0.52
CCDC171-208ENST00000486641 EIF4A3P38919 411 aaKnown RBP11.79□□□□□ -0.52
CCDC171-208ENST00000486641 KIF11P52732 1056 aa11.79□□□□□ -0.52
CCDC171-208ENST00000486641 IRX1P78414 480 aaPredicted RBP11.79□□□□□ -0.52
CCDC171-208ENST00000486641 IFFO1Q0D2I5 559 aa11.79□□□□□ -0.52
CCDC171-208ENST00000486641 TTI2Q6NXR4 508 aa11.79□□□□□ -0.52
CCDC171-208ENST00000486641 C2CD5Q86YS7 1000 aa11.79□□□□□ -0.52
CCDC171-208ENST00000486641 GPIHBP1Q8IV16 184 aa11.79□□□□□ -0.52
CCDC171-208ENST00000486641 ARFGAP2Q8N6H7 521 aa11.79□□□□□ -0.52
CCDC171-208ENST00000486641 C3orf20Q8ND61 904 aa11.79□□□□□ -0.52
CCDC171-208ENST00000486641 OR2W6PQ8NHA6 318 aa11.79□□□□□ -0.52
CCDC171-208ENST00000486641 RNF217Q8TC41 542 aa11.79□□□□□ -0.52
CCDC171-208ENST00000486641 TBC1D31Q96DN5 1066 aa11.79□□□□□ -0.52
CCDC171-208ENST00000486641 DUSP9Q99956 384 aaKnown RBP11.79□□□□□ -0.52
CCDC171-208ENST00000486641 RNF26Q9BY78 433 aaPredicted RBP11.79□□□□□ -0.52
CCDC171-208ENST00000486641 ZBTB3Q9H5J0 574 aa11.79□□□□□ -0.52
CCDC171-208ENST00000486641 SLC12A6Q9UHW9 1150 aa11.79□□□□□ -0.52
CCDC171-208ENST00000486641 SPATA31A3Q5VYP0 1347 aa11.79□□□□□ -0.52
CCDC171-208ENST00000486641 PHRF1Q9P1Y6 1649 aaKnown RBP11.79□□□□□ -0.52
CCDC171-208ENST00000486641 A0A1W2PQJ5 194 aa11.78□□□□□ -0.52
CCDC171-208ENST00000486641 ERICH2A1L162 156 aa11.78□□□□□ -0.52
CCDC171-208ENST00000486641 BUB1O43683 1085 aa11.78□□□□□ -0.52
CCDC171-208ENST00000486641 ATP6V1G2O95670 118 aa11.78□□□□□ -0.52
CCDC171-208ENST00000486641 KCNA6P17658 529 aa11.78□□□□□ -0.52
CCDC171-208ENST00000486641 TRHP20396 242 aaPredicted RBP11.78□□□□□ -0.52
CCDC171-208ENST00000486641 CALRP27797 417 aaKnown RBP11.78□□□□□ -0.52
CCDC171-208ENST00000486641 ELF3P78545 371 aaPredicted RBP11.78□□□□□ -0.52
CCDC171-208ENST00000486641 WHAMMQ8TF30 809 aa11.78□□□□□ -0.52
CCDC171-208ENST00000486641 TNFRSF25Q93038 417 aa11.78□□□□□ -0.52
CCDC171-208ENST00000486641 KRT12Q99456 494 aa11.78□□□□□ -0.52
CCDC171-208ENST00000486641 PLAGL2Q9UPG8 496 aa11.78□□□□□ -0.52
CCDC171-208ENST00000486641 RIPOR2Q9Y4F9 1068 aa11.78□□□□□ -0.52
CCDC171-208ENST00000486641 V9GY48 417 aaPredicted RBP11.78□□□□□ -0.52
CCDC171-208ENST00000486641 CHD4Q14839 1912 aa11.78□□□□□ -0.52
CCDC171-208ENST00000486641 LCA5LO95447 670 aa11.78□□□□□ -0.52
CCDC171-208ENST00000486641 HSPA9P38646 679 aaKnown RBP11.78□□□□□ -0.52
CCDC171-208ENST00000486641 SLC8A3P57103 927 aa11.78□□□□□ -0.52
CCDC171-208ENST00000486641 INHBEP58166 350 aa11.78□□□□□ -0.52
CCDC171-208ENST00000486641 BIRC2Q13490 618 aa11.78□□□□□ -0.52
CCDC171-208ENST00000486641 MIIPQ5JXC2 388 aa11.78□□□□□ -0.52
CCDC171-208ENST00000486641 CACNA2D3Q8IZS8 1091 aa11.78□□□□□ -0.52
CCDC171-208ENST00000486641 CSGALNACT2Q8N6G5 542 aa11.78□□□□□ -0.52
CCDC171-208ENST00000486641 MAB21L3Q8N8X9 362 aa11.78□□□□□ -0.52
CCDC171-208ENST00000486641 CCT6BQ92526 530 aa11.78□□□□□ -0.52
CCDC171-208ENST00000486641 HVCN1Q96D96 273 aa11.78□□□□□ -0.52
CCDC171-208ENST00000486641 MTMR8Q96EF0 704 aa11.78□□□□□ -0.52
CCDC171-208ENST00000486641 PYM1Q9BRP8 204 aaKnown RBP11.78□□□□□ -0.52
CCDC171-208ENST00000486641 NOD2Q9HC29 1040 aa11.78□□□□□ -0.52
CCDC171-208ENST00000486641 CNOT8Q9UFF9 292 aaKnown RBP11.78□□□□□ -0.52
CCDC171-208ENST00000486641 C5orf60A6NFR6 353 aa11.77□□□□□ -0.52
CCDC171-208ENST00000486641 GOLGA6L10A6NI86 522 aa11.77□□□□□ -0.52
CCDC171-208ENST00000486641 H0YGN5 161 aa11.77□□□□□ -0.52
CCDC171-208ENST00000486641 GCOM1H8Y6P7 765 aaPredicted RBP11.77□□□□□ -0.52
CCDC171-208ENST00000486641 KLRC4O43908 158 aa11.77□□□□□ -0.52
CCDC171-208ENST00000486641 DNAJC8O75937 253 aaPredicted RBP11.77□□□□□ -0.52
CCDC171-208ENST00000486641 MYZAPP0CAP1 466 aa11.77□□□□□ -0.52
CCDC171-208ENST00000486641 KCNA4P22459 653 aa11.77□□□□□ -0.52
CCDC171-208ENST00000486641 HNRNPH3P31942 346 aaKnown RBP11.77□□□□□ -0.52
CCDC171-208ENST00000486641 MCM7P33993 719 aa11.77□□□□□ -0.52
CCDC171-208ENST00000486641 MAGEA1P43355 309 aa11.77□□□□□ -0.52
CCDC171-208ENST00000486641 NPY5RQ15761 445 aa11.77□□□□□ -0.52
CCDC171-208ENST00000486641 ZKSCAN8Q15776 578 aaPredicted RBP11.77□□□□□ -0.52
CCDC171-208ENST00000486641 FIGNQ5HY92 759 aa11.77□□□□□ -0.52
CCDC171-208ENST00000486641 TMTC2Q8N394 836 aa11.77□□□□□ -0.52
CCDC171-208ENST00000486641 RAPGEF5Q92565 580 aa11.77□□□□□ -0.52
CCDC171-208ENST00000486641 RSRC1Q96IZ7 334 aaKnown RBP11.77□□□□□ -0.52
CCDC171-208ENST00000486641 NOC4LQ9BVI4 516 aaKnown RBP11.77□□□□□ -0.52
CCDC171-208ENST00000486641 ARMT1Q9H993 441 aa11.77□□□□□ -0.52
CCDC171-208ENST00000486641 PLCB1Q9NQ66 1216 aa11.77□□□□□ -0.52
CCDC171-208ENST00000486641 NFS1Q9Y697 457 aa11.77□□□□□ -0.52
CCDC171-208ENST00000486641 GSG1L2A8MUP6 293 aa11.77□□□□□ -0.53
CCDC171-208ENST00000486641 PSMA7O14818 248 aa11.77□□□□□ -0.53
CCDC171-208ENST00000486641 EPHB6O15197 1021 aa11.77□□□□□ -0.53
CCDC171-208ENST00000486641 PRKAB2O43741 272 aa11.77□□□□□ -0.53
CCDC171-208ENST00000486641 AKR1B10O60218 316 aa11.77□□□□□ -0.53
CCDC171-208ENST00000486641 HSD17B3P37058 310 aa11.77□□□□□ -0.53
CCDC171-208ENST00000486641 STAT6P42226 847 aa11.77□□□□□ -0.53
CCDC171-208ENST00000486641 DNA2P51530 1060 aa11.77□□□□□ -0.53
CCDC171-208ENST00000486641 RNASE9P60153 205 aaKnown RBP11.77□□□□□ -0.53
CCDC171-208ENST00000486641 RASSF7Q02833 373 aa11.77□□□□□ -0.53
CCDC171-208ENST00000486641 ZNF483Q8TF39 744 aaPredicted RBP11.77□□□□□ -0.53
CCDC171-208ENST00000486641 CNOT6LQ96LI5 555 aaKnown RBP11.77□□□□□ -0.53
CCDC171-208ENST00000486641 ERGIC2Q96RQ1 377 aa11.77□□□□□ -0.53
CCDC171-208ENST00000486641 KDM4CQ9H3R0 1056 aa11.77□□□□□ -0.53
CCDC171-208ENST00000486641 BCCIPQ9P287 314 aaKnown RBP eCLIP11.77□□□□□ -0.53
CCDC171-208ENST00000486641 BAIAP2L1Q9UHR4 511 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms