RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 PTGS1P23219 599 aa10.07□□□□□ -0.8
XRN1-212ENST00000486211 COPB2P35606 906 aa10.07□□□□□ -0.8
XRN1-212ENST00000486211 ERVK-21P61565 698 aa10.07□□□□□ -0.8
XRN1-212ENST00000486211 PSMC6P62333 389 aa10.07□□□□□ -0.8
XRN1-212ENST00000486211 DDX10Q13206 875 aaKnown RBP10.07□□□□□ -0.8
XRN1-212ENST00000486211 COL19A1Q14993 1142 aa10.07□□□□□ -0.8
XRN1-212ENST00000486211 TTC6Q86TZ1 520 aa10.07□□□□□ -0.8
XRN1-212ENST00000486211 CLEC10AQ8IUN9 316 aa10.07□□□□□ -0.8
XRN1-212ENST00000486211 MAGEB6Q8N7X4 407 aa10.07□□□□□ -0.8
XRN1-212ENST00000486211 ALDH8A1Q9H2A2 487 aaPredicted RBP10.07□□□□□ -0.8
XRN1-212ENST00000486211 VCPKMTQ9H867 229 aa10.07□□□□□ -0.8
XRN1-212ENST00000486211 SNRKQ9NRH2 765 aa10.07□□□□□ -0.8
XRN1-212ENST00000486211 TRMT13Q9NUP7 481 aaKnown RBP10.07□□□□□ -0.8
XRN1-212ENST00000486211 GNEQ9Y223 722 aaKnown RBP10.07□□□□□ -0.8
XRN1-212ENST00000486211 SIP14410 1827 aa10.07□□□□□ -0.8
XRN1-212ENST00000486211 TANC1Q9C0D5 1861 aa10.06□□□□□ -0.8
XRN1-212ENST00000486211 CACNA1BQ00975 2339 aa10.06□□□□□ -0.8
XRN1-212ENST00000486211 TET1Q8NFU7 2136 aa10.06□□□□□ -0.8
XRN1-212ENST00000486211 KRT37O76014 449 aa10.06□□□□□ -0.8
XRN1-212ENST00000486211 UQCRFS1P1P0C7P4 283 aa10.06□□□□□ -0.8
XRN1-212ENST00000486211 RFC2P35250 354 aa10.06□□□□□ -0.8
XRN1-212ENST00000486211 FSCN1Q16658 493 aaKnown RBP10.06□□□□□ -0.8
XRN1-212ENST00000486211 NUDT18Q6ZVK8 323 aa10.06□□□□□ -0.8
XRN1-212ENST00000486211 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.06□□□□□ -0.8
XRN1-212ENST00000486211 ARMCX2Q7L311 632 aa10.06□□□□□ -0.8
XRN1-212ENST00000486211 TMCO2Q7Z6W1 182 aaPredicted RBP10.06□□□□□ -0.8
XRN1-212ENST00000486211 EDAQ92838 391 aa10.06□□□□□ -0.8
XRN1-212ENST00000486211 UPF3BQ9BZI7 483 aaKnown RBP10.06□□□□□ -0.8
XRN1-212ENST00000486211 MTUS1Q9ULD2 1270 aa10.06□□□□□ -0.8
XRN1-212ENST00000486211 PPP1R9AQ9ULJ8 1098 aa10.06□□□□□ -0.8
XRN1-212ENST00000486211 TMX2Q9Y320 296 aa10.06□□□□□ -0.8
XRN1-212ENST00000486211 RIPK3Q9Y572 518 aa10.06□□□□□ -0.8
XRN1-212ENST00000486211 PTPRZ1P23471 2315 aaPredicted RBP10.06□□□□□ -0.8
XRN1-212ENST00000486211 LINC01553A4QN01 128 aa10.05□□□□□ -0.8
XRN1-212ENST00000486211 PROB1E7EW31 1015 aa10.05□□□□□ -0.8
XRN1-212ENST00000486211 MPHOSPH10O00566 681 aaKnown RBP10.05□□□□□ -0.8
XRN1-212ENST00000486211 BAIAP3O94812 1187 aa10.05□□□□□ -0.8
XRN1-212ENST00000486211 USP5P45974 858 aa10.05□□□□□ -0.8
XRN1-212ENST00000486211 CCDC184Q52MB2 194 aa10.05□□□□□ -0.8
XRN1-212ENST00000486211 GORABQ5T7V8 394 aa10.05□□□□□ -0.8
XRN1-212ENST00000486211 ASCL5Q7RTU5 278 aa10.05□□□□□ -0.8
XRN1-212ENST00000486211 RNF135Q8IUD6 432 aa10.05□□□□□ -0.8
XRN1-212ENST00000486211 MIGA1Q8NAN2 632 aa10.05□□□□□ -0.8
XRN1-212ENST00000486211 DDX11Q96FC9 970 aa10.05□□□□□ -0.8
XRN1-212ENST00000486211 TGS1Q96RS0 853 aaKnown RBP10.05□□□□□ -0.8
XRN1-212ENST00000486211 CDHR5Q9HBB8 845 aa10.05□□□□□ -0.8
XRN1-212ENST00000486211 IL21Q9HBE4 155 aa10.05□□□□□ -0.8
XRN1-212ENST00000486211 PIH1D3Q9NQM4 214 aaKnown RBP10.05□□□□□ -0.8
XRN1-212ENST00000486211 COL4A6Q14031 1691 aa10.05□□□□□ -0.8
XRN1-212ENST00000486211 TNKSO95271 1327 aa10.05□□□□□ -0.8
XRN1-212ENST00000486211 MYO15AQ9UKN7 3530 aa10.04□□□□□ -0.8
XRN1-212ENST00000486211 TMEM221A6NGB7 291 aa10.04□□□□□ -0.8
XRN1-212ENST00000486211 M0R296 226 aa10.04□□□□□ -0.8
XRN1-212ENST00000486211 IGSF3O75054 1194 aa10.04□□□□□ -0.8
XRN1-212ENST00000486211 IQCF3P0C7M6 154 aa10.04□□□□□ -0.8
XRN1-212ENST00000486211 CYP7A1P22680 504 aa10.04□□□□□ -0.8
XRN1-212ENST00000486211 WDR5P61964 334 aaKnown RBP10.04□□□□□ -0.8
XRN1-212ENST00000486211 TNFAIP2Q03169 654 aa10.04□□□□□ -0.8
XRN1-212ENST00000486211 PKN1Q16512 942 aa10.04□□□□□ -0.8
XRN1-212ENST00000486211 TMEM179Q6ZVK1 233 aa10.04□□□□□ -0.8
XRN1-212ENST00000486211 TLK2Q86UE8 772 aa10.04□□□□□ -0.8
XRN1-212ENST00000486211 CCDC144CPQ8IYA2 1237 aa10.04□□□□□ -0.8
XRN1-212ENST00000486211 PBXIP1Q96AQ6 731 aa10.04□□□□□ -0.8
XRN1-212ENST00000486211 PABPC5Q96DU9 382 aaKnown RBP10.04□□□□□ -0.8
XRN1-212ENST00000486211 MTRQ99707 1265 aa10.04□□□□□ -0.8
XRN1-212ENST00000486211 TEX13BQ9BXU2 312 aa10.04□□□□□ -0.8
XRN1-212ENST00000486211 SALL2Q9Y467 1007 aaPredicted RBP10.04□□□□□ -0.8
XRN1-212ENST00000486211 RNF40O75150 1001 aa10.03□□□□□ -0.8
XRN1-212ENST00000486211 SUPT20HL2P0C7V6 817 aa10.03□□□□□ -0.8
XRN1-212ENST00000486211 SMPD1P17405 629 aa10.03□□□□□ -0.8
XRN1-212ENST00000486211 DEFB103AP81534 67 aa10.03□□□□□ -0.8
XRN1-212ENST00000486211 ICA1Q05084 483 aa10.03□□□□□ -0.8
XRN1-212ENST00000486211 GPNMBQ14956 572 aa10.03□□□□□ -0.8
XRN1-212ENST00000486211 LAPTM4AQ15012 233 aa10.03□□□□□ -0.8
XRN1-212ENST00000486211 SMAD2Q15796 467 aaKnown RBP10.03□□□□□ -0.8
XRN1-212ENST00000486211 SNRNP48Q6IEG0 339 aaKnown RBP10.03□□□□□ -0.8
XRN1-212ENST00000486211 TRIM67Q6ZTA4 783 aa10.03□□□□□ -0.8
XRN1-212ENST00000486211 FBXL6Q8N531 539 aa10.03□□□□□ -0.8
XRN1-212ENST00000486211 NAV1Q8NEY1 1877 aa10.03□□□□□ -0.8
XRN1-212ENST00000486211 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.03□□□□□ -0.8
XRN1-212ENST00000486211 MRPL38Q96DV4 380 aaKnown RBP10.03□□□□□ -0.8
XRN1-212ENST00000486211 ARHGEF10LQ9HCE6 1279 aa10.03□□□□□ -0.8
XRN1-212ENST00000486211 FAM50BQ9Y247 325 aa10.03□□□□□ -0.8
XRN1-212ENST00000486211 KMT2BQ9UMN6 2715 aaPredicted RBP10.03□□□□□ -0.8
XRN1-212ENST00000486211 PRR23AA6NEV1 266 aa10.02□□□□□ -0.81
XRN1-212ENST00000486211 GJB5O95377 273 aa10.02□□□□□ -0.81
XRN1-212ENST00000486211 AKR1B1P15121 316 aa10.02□□□□□ -0.81
XRN1-212ENST00000486211 LTBRP36941 435 aa10.02□□□□□ -0.81
XRN1-212ENST00000486211 ZAP70P43403 619 aa10.02□□□□□ -0.81
XRN1-212ENST00000486211 ID4P47928 161 aa10.02□□□□□ -0.81
XRN1-212ENST00000486211 KCNJ6P48051 423 aa10.02□□□□□ -0.81
XRN1-212ENST00000486211 VCPP55072 806 aaKnown RBP10.02□□□□□ -0.81
XRN1-212ENST00000486211 TMEM63BQ5T3F8 832 aa10.02□□□□□ -0.81
XRN1-212ENST00000486211 CERS3Q8IU89 383 aa10.02□□□□□ -0.81
XRN1-212ENST00000486211 SUGP1Q8IWZ8 645 aaKnown RBP10.02□□□□□ -0.81
XRN1-212ENST00000486211 SSH1Q8WYL5 1049 aa10.02□□□□□ -0.81
XRN1-212ENST00000486211 ATOH1Q92858 354 aaPredicted RBP10.02□□□□□ -0.81
XRN1-212ENST00000486211 FTOQ9C0B1 505 aaKnown RBP eCLIP10.02□□□□□ -0.81
XRN1-212ENST00000486211 SH2D4AQ9H788 454 aa10.02□□□□□ -0.81
XRN1-212ENST00000486211 RIF1Q5UIP0 2472 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms