RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 GEMIN8Q9NWZ8 242 aaKnown RBP19.6■□□□□ 0.73
TNXB-205ENST00000486148 POTEB2H3BUK9 544 aa19.6■□□□□ 0.73
TNXB-205ENST00000486148 TEX11Q8IYF3 940 aa19.6■□□□□ 0.73
TNXB-205ENST00000486148 NOC3LQ8WTT2 800 aaKnown RBP19.6■□□□□ 0.73
TNXB-205ENST00000486148 CEP95Q96GE4 821 aa19.6■□□□□ 0.73
TNXB-205ENST00000486148 PIGSQ96S52 555 aa19.6■□□□□ 0.73
TNXB-205ENST00000486148 C7orf25Q9BPX7 421 aa19.6■□□□□ 0.73
TNXB-205ENST00000486148 SUGCTQ9HAC7 445 aa19.6■□□□□ 0.73
TNXB-205ENST00000486148 MAGEF1Q9HAY2 307 aa19.6■□□□□ 0.73
TNXB-205ENST00000486148 C6orf50Q9HD87 102 aa19.6■□□□□ 0.73
TNXB-205ENST00000486148 ENC1O14682 589 aa19.59■□□□□ 0.73
TNXB-205ENST00000486148 GTF2A1P52655 376 aaPredicted RBP19.59■□□□□ 0.73
TNXB-205ENST00000486148 PIP4K2BP78356 416 aa19.59■□□□□ 0.73
TNXB-205ENST00000486148 SEMA3FQ13275 785 aa19.59■□□□□ 0.73
TNXB-205ENST00000486148 ICE2Q659A1 982 aa19.59■□□□□ 0.73
TNXB-205ENST00000486148 GOLGA5Q8TBA6 731 aa19.59■□□□□ 0.73
TNXB-205ENST00000486148 TBCKQ8TEA7 893 aa19.59■□□□□ 0.73
TNXB-205ENST00000486148 RRP36Q96EU6 259 aaKnown RBP19.59■□□□□ 0.73
TNXB-205ENST00000486148 CNOT6LQ96LI5 555 aaKnown RBP19.59■□□□□ 0.73
TNXB-205ENST00000486148 ZNF287Q9HBT7 754 aa19.59■□□□□ 0.73
TNXB-205ENST00000486148 CD209Q9NNX6 404 aa19.59■□□□□ 0.73
TNXB-205ENST00000486148 ABCB6Q9NP58 842 aa19.59■□□□□ 0.73
TNXB-205ENST00000486148 TMEM260Q9NX78 707 aa19.59■□□□□ 0.73
TNXB-205ENST00000486148 HDAC6Q9UBN7 1215 aa19.59■□□□□ 0.73
TNXB-205ENST00000486148 BIN2Q9UBW5 565 aaPredicted RBP19.59■□□□□ 0.73
TNXB-205ENST00000486148 GPR75-ASB3A0A0A6YYF3 556 aa19.59■□□□□ 0.73
TNXB-205ENST00000486148 RFC4P35249 363 aa19.59■□□□□ 0.73
TNXB-205ENST00000486148 VSNL1P62760 191 aa19.59■□□□□ 0.73
TNXB-205ENST00000486148 MEA1Q16626 185 aa19.59■□□□□ 0.73
TNXB-205ENST00000486148 UBA5Q9GZZ9 404 aa19.59■□□□□ 0.73
TNXB-205ENST00000486148 HAUS4Q9H6D7 363 aa19.59■□□□□ 0.73
TNXB-205ENST00000486148 GNA11P29992 359 aa19.59■□□□□ 0.73
TNXB-205ENST00000486148 TBC1D8BQ0IIM8 1120 aa19.59■□□□□ 0.73
TNXB-205ENST00000486148 TSR1Q2NL82 804 aaKnown RBP19.59■□□□□ 0.73
TNXB-205ENST00000486148 POTEDQ86YR6 584 aa19.59■□□□□ 0.73
TNXB-205ENST00000486148 CNBD1Q8NA66 436 aa19.59■□□□□ 0.73
TNXB-205ENST00000486148 PSMD14O00487 310 aa19.58■□□□□ 0.73
TNXB-205ENST00000486148 TRIM21P19474 475 aaKnown RBP19.58■□□□□ 0.73
TNXB-205ENST00000486148 MIIPQ5JXC2 388 aa19.58■□□□□ 0.73
TNXB-205ENST00000486148 TRAPPC11Q7Z392 1133 aa19.58■□□□□ 0.73
TNXB-205ENST00000486148 C8orf37Q96NL8 207 aa19.58■□□□□ 0.73
TNXB-205ENST00000486148 USP17L5A8MUK1 530 aa19.58■□□□□ 0.72
TNXB-205ENST00000486148 MCM6Q14566 821 aa19.58■□□□□ 0.72
TNXB-205ENST00000486148 VPS72Q15906 364 aa19.58■□□□□ 0.72
TNXB-205ENST00000486148 CCDC122Q5T0U0 273 aa19.58■□□□□ 0.72
TNXB-205ENST00000486148 SOGA3Q5TF21 947 aa19.58■□□□□ 0.72
TNXB-205ENST00000486148 C15orf52Q6ZUT6 534 aaKnown RBP19.58■□□□□ 0.72
TNXB-205ENST00000486148 KIAA0895Q8NCT3 520 aa19.58■□□□□ 0.72
TNXB-205ENST00000486148 SECISBP2LQ93073 1101 aaKnown RBP19.58■□□□□ 0.72
TNXB-205ENST00000486148 CWC15Q9P013 229 aaKnown RBP19.58■□□□□ 0.72
TNXB-205ENST00000486148 SEC63Q9UGP8 760 aaKnown RBP19.58■□□□□ 0.72
TNXB-205ENST00000486148 ADAM21Q9UKJ8 722 aa19.58■□□□□ 0.72
TNXB-205ENST00000486148 L1RE1Q9UN81 338 aa19.58■□□□□ 0.72
TNXB-205ENST00000486148 BICDL2A1A5D9 508 aa19.57■□□□□ 0.72
TNXB-205ENST00000486148 RCCD1A6NED2 376 aa19.57■□□□□ 0.72
TNXB-205ENST00000486148 UFL1O94874 794 aa19.57■□□□□ 0.72
TNXB-205ENST00000486148 ATP1A1P05023 1023 aaKnown RBP19.57■□□□□ 0.72
TNXB-205ENST00000486148 LMAN1P49257 510 aa19.57■□□□□ 0.72
TNXB-205ENST00000486148 RHBDL3P58872 404 aa19.57■□□□□ 0.72
TNXB-205ENST00000486148 TUBB4BP68371 445 aa19.57■□□□□ 0.72
TNXB-205ENST00000486148 CCDC47Q96A33 483 aaKnown RBP19.57■□□□□ 0.72
TNXB-205ENST00000486148 TXKP42681 527 aa19.57■□□□□ 0.72
TNXB-205ENST00000486148 MTIF2P46199 727 aaKnown RBP19.57■□□□□ 0.72
TNXB-205ENST00000486148 TRAPPC3LQ5T215 181 aa19.56■□□□□ 0.72
TNXB-205ENST00000486148 REXO1Q8N1G1 1221 aaKnown RBP19.56■□□□□ 0.72
TNXB-205ENST00000486148 NGLY1Q96IV0 654 aa19.56■□□□□ 0.72
TNXB-205ENST00000486148 NOC4LQ9BVI4 516 aaKnown RBP19.56■□□□□ 0.72
TNXB-205ENST00000486148 LACRTQ9GZZ8 138 aa19.56■□□□□ 0.72
TNXB-205ENST00000486148 NHEJ1Q9H9Q4 299 aaPredicted RBP19.56■□□□□ 0.72
TNXB-205ENST00000486148 PDE11AQ9HCR9 933 aa19.56■□□□□ 0.72
TNXB-205ENST00000486148 SLC39A2Q9NP94 309 aa19.56■□□□□ 0.72
TNXB-205ENST00000486148 FRMPD2Q68DX3 1309 aaPredicted RBP19.56■□□□□ 0.72
TNXB-205ENST00000486148 LOC102724159A0A0B4J2E5 919 aa19.56■□□□□ 0.72
TNXB-205ENST00000486148 SRGAP2O75044 1071 aa19.56■□□□□ 0.72
TNXB-205ENST00000486148 ERLIN1O75477 346 aa19.56■□□□□ 0.72
TNXB-205ENST00000486148 PWP2Q15269 919 aaKnown RBP19.56■□□□□ 0.72
TNXB-205ENST00000486148 HDXQ7Z353 690 aa19.56■□□□□ 0.72
TNXB-205ENST00000486148 EXOC4Q96A65 974 aa19.56■□□□□ 0.72
TNXB-205ENST00000486148 SEMA6BQ9H3T3 888 aa19.56■□□□□ 0.72
TNXB-205ENST00000486148 PRR5LQ6MZQ0 368 aa19.55■□□□□ 0.72
TNXB-205ENST00000486148 KIAA1328Q86T90 577 aa19.55■□□□□ 0.72
TNXB-205ENST00000486148 JAKMIP2Q96AA8 810 aa19.55■□□□□ 0.72
TNXB-205ENST00000486148 PCMTD1Q96MG8 357 aaPredicted RBP19.55■□□□□ 0.72
TNXB-205ENST00000486148 NUP58Q9BVL2 599 aa19.55■□□□□ 0.72
TNXB-205ENST00000486148 BLOC1S4Q9NUP1 217 aa19.55■□□□□ 0.72
TNXB-205ENST00000486148 IL1R1P14778 569 aa19.55■□□□□ 0.72
TNXB-205ENST00000486148 KRT83P78385 493 aa19.55■□□□□ 0.72
TNXB-205ENST00000486148 ZBED6P86452 979 aa19.55■□□□□ 0.72
TNXB-205ENST00000486148 GRB10Q13322 594 aa19.55■□□□□ 0.72
TNXB-205ENST00000486148 PSD3Q9NYI0 1048 aa19.55■□□□□ 0.72
TNXB-205ENST00000486148 TAF1LQ8IZX4 1826 aa19.55■□□□□ 0.72
TNXB-205ENST00000486148 EDIL3O43854 480 aa19.54■□□□□ 0.72
TNXB-205ENST00000486148 AMPD3Q01432 767 aa19.54■□□□□ 0.72
TNXB-205ENST00000486148 MFSD14BQ5SR56 506 aa19.54■□□□□ 0.72
TNXB-205ENST00000486148 FAM114A1Q8IWE2 563 aa19.54■□□□□ 0.72
TNXB-205ENST00000486148 ZSCAN29Q8IWY8 852 aaPredicted RBP19.54■□□□□ 0.72
TNXB-205ENST00000486148 RETREG2Q8NC44 543 aa19.54■□□□□ 0.72
TNXB-205ENST00000486148 RPGRQ92834 1020 aaKnown RBP19.54■□□□□ 0.72
TNXB-205ENST00000486148 CALML4Q96GE6 196 aa19.54■□□□□ 0.72
TNXB-205ENST00000486148 MTMR9Q96QG7 549 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms