RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 CLDND1Q9NY35 253 aa11.69□□□□□ -0.54
PTPN7-213ENST00000486116 CTNNA3Q9UI47 895 aa11.69□□□□□ -0.54
PTPN7-213ENST00000486116 NCOR2Q9Y618 2525 aa11.69□□□□□ -0.54
PTPN7-213ENST00000486116 DMXL1Q9Y485 3027 aa11.69□□□□□ -0.54
PTPN7-213ENST00000486116 BAHCC1Q9P281 2608 aa11.69□□□□□ -0.54
PTPN7-213ENST00000486116 ZXDAP98168 799 aa11.68□□□□□ -0.54
PTPN7-213ENST00000486116 DLX2Q07687 328 aaPredicted RBP11.68□□□□□ -0.54
PTPN7-213ENST00000486116 G3BP1Q13283 466 aaKnown RBP eCLIP11.68□□□□□ -0.54
PTPN7-213ENST00000486116 BFSP2Q13515 415 aa11.68□□□□□ -0.54
PTPN7-213ENST00000486116 PTPROQ16827 1216 aa11.68□□□□□ -0.54
PTPN7-213ENST00000486116 IQSEC1Q6DN90 963 aa11.68□□□□□ -0.54
PTPN7-213ENST00000486116 CNKSR3Q6P9H4 555 aa11.68□□□□□ -0.54
PTPN7-213ENST00000486116 EEPD1Q7L9B9 569 aa11.68□□□□□ -0.54
PTPN7-213ENST00000486116 CHST13Q8NET6 341 aa11.68□□□□□ -0.54
PTPN7-213ENST00000486116 SDR42E1Q8WUS8 393 aa11.68□□□□□ -0.54
PTPN7-213ENST00000486116 IRF2BPLQ9H1B7 796 aa11.68□□□□□ -0.54
PTPN7-213ENST00000486116 DCP1AQ9NPI6 582 aaPredicted RBP11.68□□□□□ -0.54
PTPN7-213ENST00000486116 GPR108Q9NPR9 543 aa11.68□□□□□ -0.54
PTPN7-213ENST00000486116 POLR3EQ9NVU0 708 aa11.68□□□□□ -0.54
PTPN7-213ENST00000486116 FBXO40Q9UH90 709 aa11.68□□□□□ -0.54
PTPN7-213ENST00000486116 TRPC6Q9Y210 931 aa11.68□□□□□ -0.54
PTPN7-213ENST00000486116 MAGEB6P1A0A0J9YX57 407 aa11.67□□□□□ -0.54
PTPN7-213ENST00000486116 PNMA6EA0A0J9YXQ4 647 aa11.67□□□□□ -0.54
PTPN7-213ENST00000486116 STXBP3O00186 592 aa11.67□□□□□ -0.54
PTPN7-213ENST00000486116 MYL3P08590 195 aa11.67□□□□□ -0.54
PTPN7-213ENST00000486116 AVPR2P30518 371 aa11.67□□□□□ -0.54
PTPN7-213ENST00000486116 CTC1Q2NKJ3 1217 aa11.67□□□□□ -0.54
PTPN7-213ENST00000486116 LRRFIP1Q32MZ4 808 aaKnown RBP11.67□□□□□ -0.54
PTPN7-213ENST00000486116 EPC2Q52LR7 807 aa11.67□□□□□ -0.54
PTPN7-213ENST00000486116 PRPF38AQ8NAV1 312 aaKnown RBP11.67□□□□□ -0.54
PTPN7-213ENST00000486116 CCDC17Q96LX7 622 aa11.67□□□□□ -0.54
PTPN7-213ENST00000486116 CTAGE1Q96RT6 745 aa11.67□□□□□ -0.54
PTPN7-213ENST00000486116 CRBNQ96SW2 442 aa11.67□□□□□ -0.54
PTPN7-213ENST00000486116 MTG1Q9BT17 334 aaPredicted RBP11.67□□□□□ -0.54
PTPN7-213ENST00000486116 CRNKL1Q9BZJ0 848 aaKnown RBP11.67□□□□□ -0.54
PTPN7-213ENST00000486116 NSUN3Q9H649 340 aaKnown RBP11.67□□□□□ -0.54
PTPN7-213ENST00000486116 SLC38A10Q9HBR0 1119 aa11.67□□□□□ -0.54
PTPN7-213ENST00000486116 TLR7Q9NYK1 1049 aaKnown RBP11.67□□□□□ -0.54
PTPN7-213ENST00000486116 DBNLQ9UJU6 430 aaKnown RBP11.67□□□□□ -0.54
PTPN7-213ENST00000486116 ASB14A6NK59 587 aa11.66□□□□□ -0.54
PTPN7-213ENST00000486116 H3BNC9 293 aa11.66□□□□□ -0.54
PTPN7-213ENST00000486116 NBNO60934 754 aa11.66□□□□□ -0.54
PTPN7-213ENST00000486116 ZBED4O75132 1171 aa11.66□□□□□ -0.54
PTPN7-213ENST00000486116 CXCL10P02778 98 aa11.66□□□□□ -0.54
PTPN7-213ENST00000486116 CDK8P49336 464 aa11.66□□□□□ -0.54
PTPN7-213ENST00000486116 NFRKBQ6P4R8 1299 aa11.66□□□□□ -0.54
PTPN7-213ENST00000486116 SP7Q8TDD2 431 aaPredicted RBP11.66□□□□□ -0.54
PTPN7-213ENST00000486116 AFAP1L1Q8TED9 768 aa11.66□□□□□ -0.54
PTPN7-213ENST00000486116 ASIC4Q96FT7 647 aa11.66□□□□□ -0.54
PTPN7-213ENST00000486116 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.66□□□□□ -0.54
PTPN7-213ENST00000486116 KANSL2Q9H9L4 492 aa11.66□□□□□ -0.54
PTPN7-213ENST00000486116 A1CFQ9NQ94 594 aaKnown RBP11.66□□□□□ -0.54
PTPN7-213ENST00000486116 HOMER2Q9NSB8 354 aa11.66□□□□□ -0.54
PTPN7-213ENST00000486116 MYH7P12883 1935 aa11.66□□□□□ -0.54
PTPN7-213ENST00000486116 CYP2D7A0A087X1C5 515 aa11.65□□□□□ -0.54
PTPN7-213ENST00000486116 ABHD14A-ACY1A0A1B0GW23 586 aa11.65□□□□□ -0.54
PTPN7-213ENST00000486116 TBX10O75333 385 aa11.65□□□□□ -0.54
PTPN7-213ENST00000486116 NDUFB10O96000 172 aa11.65□□□□□ -0.54
PTPN7-213ENST00000486116 NBL1P41271 181 aa11.65□□□□□ -0.54
PTPN7-213ENST00000486116 HTRA4P83105 476 aaPredicted RBP11.65□□□□□ -0.54
PTPN7-213ENST00000486116 SMAD4Q13485 552 aaKnown RBP11.65□□□□□ -0.54
PTPN7-213ENST00000486116 GPM6BQ13491 265 aa11.65□□□□□ -0.54
PTPN7-213ENST00000486116 ALDH1L2Q3SY69 923 aa11.65□□□□□ -0.54
PTPN7-213ENST00000486116 DUSP28Q4G0W2 176 aa11.65□□□□□ -0.54
PTPN7-213ENST00000486116 KIAA1211Q6ZU35 1233 aa11.65□□□□□ -0.54
PTPN7-213ENST00000486116 LRRC8DQ7L1W4 858 aa11.65□□□□□ -0.54
PTPN7-213ENST00000486116 LCORLQ8N3X6 602 aa11.65□□□□□ -0.54
PTPN7-213ENST00000486116 DHX38Q92620 1227 aaKnown RBP11.65□□□□□ -0.54
PTPN7-213ENST00000486116 KIFC2Q96AC6 838 aa11.65□□□□□ -0.54
PTPN7-213ENST00000486116 SMC4Q9NTJ3 1288 aa11.65□□□□□ -0.54
PTPN7-213ENST00000486116 INSL6Q9Y581 213 aa11.65□□□□□ -0.54
PTPN7-213ENST00000486116 TPRP12270 2363 aaKnown RBP11.65□□□□□ -0.54
PTPN7-213ENST00000486116 SELPP16109 830 aa11.64□□□□□ -0.55
PTPN7-213ENST00000486116 CPT1AP50416 773 aa11.64□□□□□ -0.55
PTPN7-213ENST00000486116 OAZ1P54368 228 aa11.64□□□□□ -0.55
PTPN7-213ENST00000486116 PTPN11Q06124 597 aaPredicted RBP11.64□□□□□ -0.55
PTPN7-213ENST00000486116 SIGLEC14Q08ET2 396 aa11.64□□□□□ -0.55
PTPN7-213ENST00000486116 TMED8Q6PL24 325 aaPredicted RBP11.64□□□□□ -0.55
PTPN7-213ENST00000486116 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.64□□□□□ -0.55
PTPN7-213ENST00000486116 C16orf86Q6ZW13 317 aa11.64□□□□□ -0.55
PTPN7-213ENST00000486116 CAGE1Q8TC20 777 aa11.64□□□□□ -0.55
PTPN7-213ENST00000486116 ACAD9Q9H845 621 aa11.64□□□□□ -0.55
PTPN7-213ENST00000486116 VTA1Q9NP79 307 aa11.64□□□□□ -0.55
PTPN7-213ENST00000486116 NOD1Q9Y239 953 aa11.64□□□□□ -0.55
PTPN7-213ENST00000486116 CTDP1Q9Y5B0 961 aaPredicted RBP11.64□□□□□ -0.55
PTPN7-213ENST00000486116 KIAA1671Q9BY89 1806 aa11.64□□□□□ -0.55
PTPN7-213ENST00000486116 CHD6Q8TD26 2715 aa11.64□□□□□ -0.55
PTPN7-213ENST00000486116 LOC730098B7Z3J9 87 aa11.63□□□□□ -0.55
PTPN7-213ENST00000486116 USP17L12C9JPN9 530 aa11.63□□□□□ -0.55
PTPN7-213ENST00000486116 USP17L21D6R901 530 aa11.63□□□□□ -0.55
PTPN7-213ENST00000486116 F5H6K3 240 aa11.63□□□□□ -0.55
PTPN7-213ENST00000486116 GNAI3P08754 354 aa11.63□□□□□ -0.55
PTPN7-213ENST00000486116 KLRC3Q07444 240 aa11.63□□□□□ -0.55
PTPN7-213ENST00000486116 HYAL1Q12794 435 aa11.63□□□□□ -0.55
PTPN7-213ENST00000486116 MKRN4PQ13434 485 aaPredicted RBP11.63□□□□□ -0.55
PTPN7-213ENST00000486116 PTGISQ16647 500 aa11.63□□□□□ -0.55
PTPN7-213ENST00000486116 CCDC155Q8N6L0 562 aa11.63□□□□□ -0.55
PTPN7-213ENST00000486116 MORC4Q8TE76 937 aa11.63□□□□□ -0.55
PTPN7-213ENST00000486116 SAMD11Q96NU1 681 aa11.63□□□□□ -0.55
PTPN7-213ENST00000486116 GPHNQ9NQX3 736 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms