RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 ZSCAN23Q3MJ62 389 aa16.42■□□□□ 0.22
COL9A1-207ENST00000486080 CLEC4DQ8WXI8 215 aa16.42■□□□□ 0.22
COL9A1-207ENST00000486080 TMEM60Q9H2L4 133 aa16.42■□□□□ 0.22
COL9A1-207ENST00000486080 MORC2Q9Y6X9 1032 aaPredicted RBP16.42■□□□□ 0.22
COL9A1-207ENST00000486080 NFIBO00712 420 aa16.41■□□□□ 0.22
COL9A1-207ENST00000486080 FDX1P10109 184 aa16.41■□□□□ 0.22
COL9A1-207ENST00000486080 CMA1P23946 247 aa16.41■□□□□ 0.22
COL9A1-207ENST00000486080 NDUFA8P51970 172 aa16.41■□□□□ 0.22
COL9A1-207ENST00000486080 AP3B2Q13367 1082 aa16.41■□□□□ 0.22
COL9A1-207ENST00000486080 SNW1Q13573 536 aaKnown RBP16.41■□□□□ 0.22
COL9A1-207ENST00000486080 IL17AQ16552 155 aa16.41■□□□□ 0.22
COL9A1-207ENST00000486080 MUM1L1Q5H9M0 696 aa16.41■□□□□ 0.22
COL9A1-207ENST00000486080 POTEEQ6S8J3 1075 aa16.41■□□□□ 0.22
COL9A1-207ENST00000486080 FCHSD1Q86WN1 690 aa16.41■□□□□ 0.22
COL9A1-207ENST00000486080 ENGASEQ8NFI3 743 aa16.41■□□□□ 0.22
COL9A1-207ENST00000486080 HOXC10Q9NYD6 342 aa16.41■□□□□ 0.22
COL9A1-207ENST00000486080 RBBP6Q7Z6E9 1792 aaKnown RBP16.4■□□□□ 0.22
COL9A1-207ENST00000486080 GCOM1H8Y6P7 765 aaPredicted RBP16.4■□□□□ 0.22
COL9A1-207ENST00000486080 PEX10O60683 326 aa16.4■□□□□ 0.22
COL9A1-207ENST00000486080 TDP2O95551 362 aa16.4■□□□□ 0.22
COL9A1-207ENST00000486080 POLR2MP0CAP2 368 aa16.4■□□□□ 0.22
COL9A1-207ENST00000486080 HOXA7P31268 230 aaPredicted RBP16.4■□□□□ 0.22
COL9A1-207ENST00000486080 MKRN3Q13064 507 aaKnown RBP16.4■□□□□ 0.22
COL9A1-207ENST00000486080 TMEM132BQ14DG7 1078 aa16.4■□□□□ 0.22
COL9A1-207ENST00000486080 RESP18Q5W5W9 173 aa16.4■□□□□ 0.22
COL9A1-207ENST00000486080 CCDC73Q6ZRK6 1079 aa16.4■□□□□ 0.22
COL9A1-207ENST00000486080 CSRNP2Q9H175 543 aa16.4■□□□□ 0.22
COL9A1-207ENST00000486080 ZNF214Q9UL59 606 aaPredicted RBP16.4■□□□□ 0.22
COL9A1-207ENST00000486080 RIPK3Q9Y572 518 aa16.4■□□□□ 0.22
COL9A1-207ENST00000486080 SPDYE3A6NKU9 549 aa16.4■□□□□ 0.22
COL9A1-207ENST00000486080 PFKFB1P16118 471 aa16.4■□□□□ 0.22
COL9A1-207ENST00000486080 FAM160A1Q05DH4 1040 aa16.4■□□□□ 0.22
COL9A1-207ENST00000486080 SNAPC2Q13487 334 aa16.4■□□□□ 0.22
COL9A1-207ENST00000486080 CCDC183Q5T5S1 534 aa16.4■□□□□ 0.22
COL9A1-207ENST00000486080 SNRNP48Q6IEG0 339 aaKnown RBP16.4■□□□□ 0.22
COL9A1-207ENST00000486080 GPAT2Q6NUI2 795 aa16.4■□□□□ 0.22
COL9A1-207ENST00000486080 FERMT2Q96AC1 680 aa16.4■□□□□ 0.22
COL9A1-207ENST00000486080 TRERF1Q96PN7 1200 aa16.4■□□□□ 0.22
COL9A1-207ENST00000486080 AGTPBP1Q9UPW5 1226 aa16.4■□□□□ 0.22
COL9A1-207ENST00000486080 MYPNQ86TC9 1320 aa16.4■□□□□ 0.22
COL9A1-207ENST00000486080 A0A0G2JMZ2 1700 aa16.39■□□□□ 0.21
COL9A1-207ENST00000486080 VWA3AA6NCI4 1184 aa16.39■□□□□ 0.21
COL9A1-207ENST00000486080 SLC37A4O43826 429 aa16.39■□□□□ 0.21
COL9A1-207ENST00000486080 NEMFO60524 1076 aa16.39■□□□□ 0.21
COL9A1-207ENST00000486080 FOSP01100 380 aaPredicted RBP16.39■□□□□ 0.21
COL9A1-207ENST00000486080 CAMK4Q16566 473 aa16.39■□□□□ 0.21
COL9A1-207ENST00000486080 USP49Q70CQ1 688 aa16.39■□□□□ 0.21
COL9A1-207ENST00000486080 POTEDQ86YR6 584 aa16.39■□□□□ 0.21
COL9A1-207ENST00000486080 FMR1NBQ8N0W7 255 aaPredicted RBP16.39■□□□□ 0.21
COL9A1-207ENST00000486080 ZNF784Q8NCA9 323 aaPredicted RBP16.39■□□□□ 0.21
COL9A1-207ENST00000486080 CRYGNQ8WXF5 182 aa16.39■□□□□ 0.21
COL9A1-207ENST00000486080 SYAP1Q96A49 352 aaPredicted RBP16.39■□□□□ 0.21
COL9A1-207ENST00000486080 ASCC2Q9H1I8 757 aaPredicted RBP16.39■□□□□ 0.21
COL9A1-207ENST00000486080 SYCE3A1L190 88 aa16.38■□□□□ 0.21
COL9A1-207ENST00000486080 HSD17B4P51659 736 aa16.38■□□□□ 0.21
COL9A1-207ENST00000486080 OAZ1P54368 228 aa16.38■□□□□ 0.21
COL9A1-207ENST00000486080 ARHGAP4P98171 946 aa16.38■□□□□ 0.21
COL9A1-207ENST00000486080 MCTP2Q6DN12 878 aa16.38■□□□□ 0.21
COL9A1-207ENST00000486080 FASTKD5Q7L8L6 764 aaKnown RBP16.38■□□□□ 0.21
COL9A1-207ENST00000486080 ZNF579Q8NAF0 562 aaKnown RBP16.38■□□□□ 0.21
COL9A1-207ENST00000486080 GPBP1L1Q9HC44 474 aaPredicted RBP16.38■□□□□ 0.21
COL9A1-207ENST00000486080 HPSEQ9Y251 543 aa16.38■□□□□ 0.21
COL9A1-207ENST00000486080 ATP2A1O14983 1001 aa16.38■□□□□ 0.21
COL9A1-207ENST00000486080 SREBF1P36956 1147 aa16.38■□□□□ 0.21
COL9A1-207ENST00000486080 IRX3P78415 501 aaPredicted RBP16.38■□□□□ 0.21
COL9A1-207ENST00000486080 PLS1Q14651 629 aa16.38■□□□□ 0.21
COL9A1-207ENST00000486080 ARL6IP4Q66PJ3 421 aaKnown RBP16.38■□□□□ 0.21
COL9A1-207ENST00000486080 PPP4R3AQ6IN85 833 aa16.38■□□□□ 0.21
COL9A1-207ENST00000486080 RNF146Q9NTX7 359 aa16.38■□□□□ 0.21
COL9A1-207ENST00000486080 DDX19AQ9NUU7 478 aaKnown RBP16.38■□□□□ 0.21
COL9A1-207ENST00000486080 BTBD7Q9P203 1132 aa16.38■□□□□ 0.21
COL9A1-207ENST00000486080 COL20A1Q9P218 1284 aa16.38■□□□□ 0.21
COL9A1-207ENST00000486080 FAM237AA0A1B0GTK4 181 aa16.37■□□□□ 0.21
COL9A1-207ENST00000486080 STAT3P40763 770 aa16.37■□□□□ 0.21
COL9A1-207ENST00000486080 USP11P51784 963 aa16.37■□□□□ 0.21
COL9A1-207ENST00000486080 UBXN2AP68543 259 aa16.37■□□□□ 0.21
COL9A1-207ENST00000486080 LBX2Q6XYB7 198 aa16.37■□□□□ 0.21
COL9A1-207ENST00000486080 MCF2L2Q86YR7 1114 aa16.37■□□□□ 0.21
COL9A1-207ENST00000486080 TEX2Q8IWB9 1127 aa16.37■□□□□ 0.21
COL9A1-207ENST00000486080 EPSTI1Q96J88 318 aa16.37■□□□□ 0.21
COL9A1-207ENST00000486080 MS4A4AQ96JQ5 239 aa16.37■□□□□ 0.21
COL9A1-207ENST00000486080 TEX13BQ9BXU2 312 aa16.37■□□□□ 0.21
COL9A1-207ENST00000486080 NUP62CLQ9H1M0 184 aa16.37■□□□□ 0.21
COL9A1-207ENST00000486080 CLSTN2Q9H4D0 955 aa16.37■□□□□ 0.21
COL9A1-207ENST00000486080 DDX25Q9UHL0 483 aaKnown RBP16.37■□□□□ 0.21
COL9A1-207ENST00000486080 PNMA2Q9UL42 364 aa16.37■□□□□ 0.21
COL9A1-207ENST00000486080 LAD1O00515 517 aa16.36■□□□□ 0.21
COL9A1-207ENST00000486080 OR52Z1P0C646 297 aa16.36■□□□□ 0.21
COL9A1-207ENST00000486080 HUNKP57058 714 aa16.36■□□□□ 0.21
COL9A1-207ENST00000486080 HERVK_113P62684 666 aa16.36■□□□□ 0.21
COL9A1-207ENST00000486080 ORC2Q13416 577 aaPredicted RBP16.36■□□□□ 0.21
COL9A1-207ENST00000486080 PANK2Q9BZ23 570 aa16.36■□□□□ 0.21
COL9A1-207ENST00000486080 KCNH3Q9ULD8 1083 aa16.36■□□□□ 0.21
COL9A1-207ENST00000486080 KINO60870 393 aaKnown RBP16.35■□□□□ 0.21
COL9A1-207ENST00000486080 ZNF202O95125 648 aa16.35■□□□□ 0.21
COL9A1-207ENST00000486080 SYKP43405 635 aa16.35■□□□□ 0.21
COL9A1-207ENST00000486080 GHRHRQ02643 423 aa16.35■□□□□ 0.21
COL9A1-207ENST00000486080 GSE1Q14687 1217 aa16.35■□□□□ 0.21
COL9A1-207ENST00000486080 CALCRLQ16602 461 aa16.35■□□□□ 0.21
COL9A1-207ENST00000486080 SPRYD7Q5W111 196 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms