RNA–Protein interactions for RNA: ENST00000486078.1

GTF2B-206, Transcript of general transcription factor IIB, humanhuman

TSL 5

Gene GTF2B, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-206ENST00000486078 NFE2Q16621 373 aaPredicted RBP6.38□□□□□ -1.39
GTF2B-206ENST00000486078 CT47A1Q5JQC4 288 aaPredicted RBP6.38□□□□□ -1.39
GTF2B-206ENST00000486078 PPP1R26Q5T8A7 1209 aaPredicted RBP6.38□□□□□ -1.39
GTF2B-206ENST00000486078 NBPF12Q5TAG4 269 aaPredicted RBP6.38□□□□□ -1.39
GTF2B-206ENST00000486078 XKR5Q6UX68 686 aa6.38□□□□□ -1.39
GTF2B-206ENST00000486078 ZNF438Q7Z4V0 828 aa6.38□□□□□ -1.39
GTF2B-206ENST00000486078 NECAB2Q7Z6G3 386 aa6.38□□□□□ -1.39
GTF2B-206ENST00000486078 RAVER1Q8IY67 606 aaKnown RBP6.38□□□□□ -1.39
GTF2B-206ENST00000486078 SAMD3Q8N6K7 520 aa6.38□□□□□ -1.39
GTF2B-206ENST00000486078 FAM89AQ96GI7 184 aa6.38□□□□□ -1.39
GTF2B-206ENST00000486078 MPHOSPH6Q99547 160 aaKnown RBP6.38□□□□□ -1.39
GTF2B-206ENST00000486078 CDX2Q99626 313 aaPredicted RBP6.38□□□□□ -1.39
GTF2B-206ENST00000486078 GNL3LQ9NVN8 582 aaKnown RBP6.38□□□□□ -1.39
GTF2B-206ENST00000486078 ACTR10Q9NZ32 417 aa6.38□□□□□ -1.39
GTF2B-206ENST00000486078 MCM8Q9UJA3 840 aa6.38□□□□□ -1.39
GTF2B-206ENST00000486078 FNDC3AQ9Y2H6 1198 aaKnown RBP6.38□□□□□ -1.39
GTF2B-206ENST00000486078 PPP2R3BQ9Y5P8 575 aa6.38□□□□□ -1.39
GTF2B-206ENST00000486078 MYPNQ86TC9 1320 aa6.38□□□□□ -1.39
GTF2B-206ENST00000486078 ALPK3Q96L96 1907 aa6.38□□□□□ -1.39
GTF2B-206ENST00000486078 MYO3BQ8WXR4 1341 aa6.37□□□□□ -1.39
GTF2B-206ENST00000486078 CCDC189A1A4V9 331 aa6.37□□□□□ -1.39
GTF2B-206ENST00000486078 UPP2O95045 317 aa6.37□□□□□ -1.39
GTF2B-206ENST00000486078 ASMTLO95671 621 aa6.37□□□□□ -1.39
GTF2B-206ENST00000486078 LDHAP00338 332 aaKnown RBP6.37□□□□□ -1.39
GTF2B-206ENST00000486078 ANXA1P04083 346 aa6.37□□□□□ -1.39
GTF2B-206ENST00000486078 MYL1P05976 194 aa6.37□□□□□ -1.39
GTF2B-206ENST00000486078 CAPN2P17655 700 aa6.37□□□□□ -1.39
GTF2B-206ENST00000486078 MMP14P50281 582 aa6.37□□□□□ -1.39
GTF2B-206ENST00000486078 EIF4A1P60842 406 aaKnown RBP6.37□□□□□ -1.39
GTF2B-206ENST00000486078 AIMP1Q12904 312 aaKnown RBP6.37□□□□□ -1.39
GTF2B-206ENST00000486078 DLGAP5Q15398 846 aa6.37□□□□□ -1.39
GTF2B-206ENST00000486078 ZRSR2Q15696 482 aaKnown RBP6.37□□□□□ -1.39
GTF2B-206ENST00000486078 STRIP1Q5VSL9 837 aa6.37□□□□□ -1.39
GTF2B-206ENST00000486078 PPP4R4Q6NUP7 873 aa6.37□□□□□ -1.39
GTF2B-206ENST00000486078 FBXL19Q6PCT2 694 aa6.37□□□□□ -1.39
GTF2B-206ENST00000486078 NME8Q8N427 588 aa6.37□□□□□ -1.39
GTF2B-206ENST00000486078 DIS3LQ8TF46 1054 aaKnown RBP6.37□□□□□ -1.39
GTF2B-206ENST00000486078 NKD1Q969G9 470 aa6.37□□□□□ -1.39
GTF2B-206ENST00000486078 ZNF775Q96BV0 537 aaPredicted RBP6.37□□□□□ -1.39
GTF2B-206ENST00000486078 IL17RAQ96F46 866 aa6.37□□□□□ -1.39
GTF2B-206ENST00000486078 SCYL1Q96KG9 808 aa6.37□□□□□ -1.39
GTF2B-206ENST00000486078 ZFP42Q96MM3 310 aa6.37□□□□□ -1.39
GTF2B-206ENST00000486078 DEFB118Q96PH6 123 aa6.37□□□□□ -1.39
GTF2B-206ENST00000486078 CRBNQ96SW2 442 aa6.37□□□□□ -1.39
GTF2B-206ENST00000486078 PHACTR1Q9C0D0 580 aa6.37□□□□□ -1.39
GTF2B-206ENST00000486078 SUV39H2Q9H5I1 410 aa6.37□□□□□ -1.39
GTF2B-206ENST00000486078 UBP1Q9NZI7 540 aa6.37□□□□□ -1.39
GTF2B-206ENST00000486078 CPA4Q9UI42 421 aa6.37□□□□□ -1.39
GTF2B-206ENST00000486078 VCANP13611 3396 aa6.37□□□□□ -1.39
GTF2B-206ENST00000486078 BTBD19C9JJ37 291 aa6.36□□□□□ -1.39
GTF2B-206ENST00000486078 HTATSF1O43719 755 aaKnown RBP6.36□□□□□ -1.39
GTF2B-206ENST00000486078 GREM1O60565 184 aa6.36□□□□□ -1.39
GTF2B-206ENST00000486078 BMP1P13497 986 aa6.36□□□□□ -1.39
GTF2B-206ENST00000486078 SNRPBP14678 240 aaKnown RBP6.36□□□□□ -1.39
GTF2B-206ENST00000486078 EIF2S2P20042 333 aaKnown RBP6.36□□□□□ -1.39
GTF2B-206ENST00000486078 TTF1Q15361 905 aaPredicted RBP6.36□□□□□ -1.39
GTF2B-206ENST00000486078 FXNQ16595 210 aa6.36□□□□□ -1.39
GTF2B-206ENST00000486078 PROSER3Q2NL68 480 aa6.36□□□□□ -1.39
GTF2B-206ENST00000486078 SH3PXD2AQ5TCZ1 1133 aa6.36□□□□□ -1.39
GTF2B-206ENST00000486078 PDE12Q6L8Q7 609 aaKnown RBP6.36□□□□□ -1.39
GTF2B-206ENST00000486078 C17orf99Q6UX52 265 aa6.36□□□□□ -1.39
GTF2B-206ENST00000486078 CCDC81Q6ZN84 652 aa6.36□□□□□ -1.39
GTF2B-206ENST00000486078 Q6ZVU0 165 aa6.36□□□□□ -1.39
GTF2B-206ENST00000486078 COPS6Q7L5N1 327 aa6.36□□□□□ -1.39
GTF2B-206ENST00000486078 XAGE2Q96GT9 111 aa6.36□□□□□ -1.39
GTF2B-206ENST00000486078 ZBED3Q96IU2 234 aaPredicted RBP6.36□□□□□ -1.39
GTF2B-206ENST00000486078 SNX27Q96L92 541 aa6.36□□□□□ -1.39
GTF2B-206ENST00000486078 TSEN34Q9BSV6 310 aaKnown RBP6.36□□□□□ -1.39
GTF2B-206ENST00000486078 VEZTQ9HBM0 779 aa6.36□□□□□ -1.39
GTF2B-206ENST00000486078 SEC31BQ9NQW1 1179 aa6.36□□□□□ -1.39
GTF2B-206ENST00000486078 TMPRSS4Q9NRS4 437 aa6.36□□□□□ -1.39
GTF2B-206ENST00000486078 RAB6BQ9NRW1 208 aa6.36□□□□□ -1.39
GTF2B-206ENST00000486078 USP3Q9Y6I4 520 aa6.36□□□□□ -1.39
GTF2B-206ENST00000486078 ZNF804BA4D1E1 1349 aa6.35□□□□□ -1.39
GTF2B-206ENST00000486078 XDHP47989 1333 aa6.35□□□□□ -1.39
GTF2B-206ENST00000486078 CLRN2A0PK11 232 aa6.35□□□□□ -1.39
GTF2B-206ENST00000486078 MYO1BO43795 1136 aa6.35□□□□□ -1.39
GTF2B-206ENST00000486078 ADCY3O60266 1144 aa6.35□□□□□ -1.39
GTF2B-206ENST00000486078 MICAL2O94851 1124 aa6.35□□□□□ -1.39
GTF2B-206ENST00000486078 CETPP11597 493 aa6.35□□□□□ -1.39
GTF2B-206ENST00000486078 SOX5P35711 763 aa6.35□□□□□ -1.39
GTF2B-206ENST00000486078 PRKCZQ05513 592 aa6.35□□□□□ -1.39
GTF2B-206ENST00000486078 FAM160A1Q05DH4 1040 aa6.35□□□□□ -1.39
GTF2B-206ENST00000486078 GRM2Q14416 872 aa6.35□□□□□ -1.39
GTF2B-206ENST00000486078 DHX8Q14562 1220 aaKnown RBP6.35□□□□□ -1.39
GTF2B-206ENST00000486078 GRIN2CQ14957 1233 aa6.35□□□□□ -1.39
GTF2B-206ENST00000486078 HIF1AQ16665 826 aa6.35□□□□□ -1.39
GTF2B-206ENST00000486078 SNAP47Q5SQN1 464 aa6.35□□□□□ -1.39
GTF2B-206ENST00000486078 C1orf53Q5VUE5 145 aa6.35□□□□□ -1.39
GTF2B-206ENST00000486078 TTLL5Q6EMB2 1281 aa6.35□□□□□ -1.39
GTF2B-206ENST00000486078 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.35□□□□□ -1.39
GTF2B-206ENST00000486078 DDX42Q86XP3 938 aaKnown RBP eCLIP6.35□□□□□ -1.39
GTF2B-206ENST00000486078 GALNT12Q8IXK2 581 aa6.35□□□□□ -1.39
GTF2B-206ENST00000486078 MEIOBQ8N635 442 aa6.35□□□□□ -1.39
GTF2B-206ENST00000486078 OR6P1Q8NGX9 317 aa6.35□□□□□ -1.39
GTF2B-206ENST00000486078 XAGE3Q8WTP9 111 aa6.35□□□□□ -1.39
GTF2B-206ENST00000486078 MYLIPQ8WY64 445 aa6.35□□□□□ -1.39
GTF2B-206ENST00000486078 MFSD3Q96ES6 412 aa6.35□□□□□ -1.39
GTF2B-206ENST00000486078 RHOVQ96L33 236 aa6.35□□□□□ -1.39
GTF2B-206ENST00000486078 TRIM56Q9BRZ2 755 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms