RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 ATP2A1O14983 1001 aa11.76□□□□□ -0.53
SND1-213ENST00000486037 IGSF3O75054 1194 aa11.76□□□□□ -0.53
SND1-213ENST00000486037 RGS20O76081 388 aa11.76□□□□□ -0.53
SND1-213ENST00000486037 GNAI2P04899 355 aa11.76□□□□□ -0.53
SND1-213ENST00000486037 RFC2P35250 354 aa11.76□□□□□ -0.53
SND1-213ENST00000486037 CDK8P49336 464 aa11.76□□□□□ -0.53
SND1-213ENST00000486037 CEP85Q6P2H3 762 aa11.76□□□□□ -0.53
SND1-213ENST00000486037 ADHFE1Q8IWW8 467 aa11.76□□□□□ -0.53
SND1-213ENST00000486037 SEZ6LQ9BYH1 1024 aa11.76□□□□□ -0.53
SND1-213ENST00000486037 RWDD1Q9H446 243 aaPredicted RBP11.76□□□□□ -0.53
SND1-213ENST00000486037 HOMER2Q9NSB8 354 aa11.76□□□□□ -0.53
SND1-213ENST00000486037 SWAP70Q9UH65 585 aa11.76□□□□□ -0.53
SND1-213ENST00000486037 TRIP12Q14669 1992 aaPredicted RBP11.76□□□□□ -0.53
SND1-213ENST00000486037 SCN10AQ9Y5Y9 1956 aa11.76□□□□□ -0.53
SND1-213ENST00000486037 ZEB2O60315 1214 aa11.75□□□□□ -0.53
SND1-213ENST00000486037 BAIAP3O94812 1187 aa11.75□□□□□ -0.53
SND1-213ENST00000486037 SUPT20HL2P0C7V6 817 aa11.75□□□□□ -0.53
SND1-213ENST00000486037 KCNJ6P48051 423 aa11.75□□□□□ -0.53
SND1-213ENST00000486037 PURAQ00577 322 aaKnown RBP11.75□□□□□ -0.53
SND1-213ENST00000486037 HERC4Q5GLZ8 1057 aaPredicted RBP11.75□□□□□ -0.53
SND1-213ENST00000486037 TCEAL5Q5H9L2 206 aa11.75□□□□□ -0.53
SND1-213ENST00000486037 FAM117BQ6P1L5 589 aa11.75□□□□□ -0.53
SND1-213ENST00000486037 EAF2Q96CJ1 260 aaPredicted RBP11.75□□□□□ -0.53
SND1-213ENST00000486037 PURBQ96QR8 312 aaKnown RBP11.75□□□□□ -0.53
SND1-213ENST00000486037 CTAGE1Q96RT6 745 aa11.75□□□□□ -0.53
SND1-213ENST00000486037 ZBED2Q9BTP6 218 aa11.75□□□□□ -0.53
SND1-213ENST00000486037 CRNKL1Q9BZJ0 848 aaKnown RBP11.75□□□□□ -0.53
SND1-213ENST00000486037 SLC38A10Q9HBR0 1119 aa11.75□□□□□ -0.53
SND1-213ENST00000486037 GOPCQ9HD26 462 aa11.75□□□□□ -0.53
SND1-213ENST00000486037 LCTP09848 1927 aa11.75□□□□□ -0.53
SND1-213ENST00000486037 GREB1LQ9C091 1923 aaPredicted RBP11.74□□□□□ -0.53
SND1-213ENST00000486037 TCRBV5S4A2TA0A5A2 114 aa11.74□□□□□ -0.53
SND1-213ENST00000486037 PITPNM1O00562 1244 aa11.74□□□□□ -0.53
SND1-213ENST00000486037 GJB5O95377 273 aa11.74□□□□□ -0.53
SND1-213ENST00000486037 NDUFB10O96000 172 aa11.74□□□□□ -0.53
SND1-213ENST00000486037 MYL3P08590 195 aa11.74□□□□□ -0.53
SND1-213ENST00000486037 PDE6AP16499 860 aa11.74□□□□□ -0.53
SND1-213ENST00000486037 LTBRP36941 435 aa11.74□□□□□ -0.53
SND1-213ENST00000486037 CLUL1Q15846 466 aa11.74□□□□□ -0.53
SND1-213ENST00000486037 NBPF20Q3BBV1 942 aa11.74□□□□□ -0.53
SND1-213ENST00000486037 PUS10Q3MIT2 529 aaKnown RBP11.74□□□□□ -0.53
SND1-213ENST00000486037 EP400NLQ6ZTU2 488 aa11.74□□□□□ -0.53
SND1-213ENST00000486037 SKAP1Q86WV1 359 aa11.74□□□□□ -0.53
SND1-213ENST00000486037 RNF135Q8IUD6 432 aa11.74□□□□□ -0.53
SND1-213ENST00000486037 RPAP2Q8IXW5 612 aaPredicted RBP11.74□□□□□ -0.53
SND1-213ENST00000486037 KIFC2Q96AC6 838 aa11.74□□□□□ -0.53
SND1-213ENST00000486037 ARMT1Q9H993 441 aa11.74□□□□□ -0.53
SND1-213ENST00000486037 A1CFQ9NQ94 594 aaKnown RBP11.74□□□□□ -0.53
SND1-213ENST00000486037 PRKAG3Q9UGI9 489 aa11.74□□□□□ -0.53
SND1-213ENST00000486037 COL4A6Q14031 1691 aa11.74□□□□□ -0.53
SND1-213ENST00000486037 ATG2AQ2TAZ0 1938 aa11.74□□□□□ -0.53
SND1-213ENST00000486037 TMEM221A6NGB7 291 aa11.73□□□□□ -0.53
SND1-213ENST00000486037 M0R296 226 aa11.73□□□□□ -0.53
SND1-213ENST00000486037 VCPP55072 806 aaKnown RBP11.73□□□□□ -0.53
SND1-213ENST00000486037 POLA2Q14181 598 aa11.73□□□□□ -0.53
SND1-213ENST00000486037 COL19A1Q14993 1142 aa11.73□□□□□ -0.53
SND1-213ENST00000486037 FAM47CQ5HY64 1035 aa11.73□□□□□ -0.53
SND1-213ENST00000486037 C16orf86Q6ZW13 317 aa11.73□□□□□ -0.53
SND1-213ENST00000486037 ASCL5Q7RTU5 278 aa11.73□□□□□ -0.53
SND1-213ENST00000486037 SMC5Q8IY18 1101 aa11.73□□□□□ -0.53
SND1-213ENST00000486037 PRPF38AQ8NAV1 312 aaKnown RBP11.73□□□□□ -0.53
SND1-213ENST00000486037 RETREG2Q8NC44 543 aa11.73□□□□□ -0.53
SND1-213ENST00000486037 CHST13Q8NET6 341 aa11.73□□□□□ -0.53
SND1-213ENST00000486037 FBXO22Q8NEZ5 403 aa11.73□□□□□ -0.53
SND1-213ENST00000486037 EDAQ92838 391 aa11.73□□□□□ -0.53
SND1-213ENST00000486037 PABPC5Q96DU9 382 aaKnown RBP11.73□□□□□ -0.53
SND1-213ENST00000486037 MRPL38Q96DV4 380 aaKnown RBP11.73□□□□□ -0.53
SND1-213ENST00000486037 CCDC17Q96LX7 622 aa11.73□□□□□ -0.53
SND1-213ENST00000486037 RAD9AQ99638 391 aa11.73□□□□□ -0.53
SND1-213ENST00000486037 KANSL2Q9H9L4 492 aa11.73□□□□□ -0.53
SND1-213ENST00000486037 ZNF532Q9HCE3 1301 aa11.73□□□□□ -0.53
SND1-213ENST00000486037 DMXL1Q9Y485 3027 aa11.73□□□□□ -0.53
SND1-213ENST00000486037 F5H6K3 240 aa11.72□□□□□ -0.53
SND1-213ENST00000486037 NBNO60934 754 aa11.72□□□□□ -0.53
SND1-213ENST00000486037 ZBED4O75132 1171 aa11.72□□□□□ -0.53
SND1-213ENST00000486037 CHGBP05060 677 aa11.72□□□□□ -0.53
SND1-213ENST00000486037 ATP8B2P98198 1209 aa11.72□□□□□ -0.53
SND1-213ENST00000486037 KLRC3Q07444 240 aa11.72□□□□□ -0.53
SND1-213ENST00000486037 DLX2Q07687 328 aaPredicted RBP11.72□□□□□ -0.53
SND1-213ENST00000486037 SLC9C2Q5TAH2 1124 aa11.72□□□□□ -0.53
SND1-213ENST00000486037 C12orf60Q5U649 245 aa11.72□□□□□ -0.53
SND1-213ENST00000486037 IQSEC1Q6DN90 963 aa11.72□□□□□ -0.53
SND1-213ENST00000486037 BMP8AQ7Z5Y6 402 aa11.72□□□□□ -0.53
SND1-213ENST00000486037 DHX38Q92620 1227 aaKnown RBP11.72□□□□□ -0.53
SND1-213ENST00000486037 PBXIP1Q96AQ6 731 aa11.72□□□□□ -0.53
SND1-213ENST00000486037 Q9Y3F1 56 aa11.72□□□□□ -0.53
SND1-213ENST00000486037 RIF1Q5UIP0 2472 aaKnown RBP11.72□□□□□ -0.53
SND1-213ENST00000486037 ASB14A6NK59 587 aa11.71□□□□□ -0.53
SND1-213ENST00000486037 OS9Q13438 667 aaPredicted RBP11.71□□□□□ -0.53
SND1-213ENST00000486037 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.71□□□□□ -0.531e-9■■■■□ 22
SND1-213ENST00000486037 TRIM67Q6ZTA4 783 aa11.71□□□□□ -0.53
SND1-213ENST00000486037 KIAA1211Q6ZU35 1233 aa11.71□□□□□ -0.53
SND1-213ENST00000486037 RPAINQ86UA6 219 aa11.71□□□□□ -0.53
SND1-213ENST00000486037 BANK1Q8NDB2 785 aa11.71□□□□□ -0.53
SND1-213ENST00000486037 MTG1Q9BT17 334 aaPredicted RBP11.71□□□□□ -0.53
SND1-213ENST00000486037 CLDND1Q9NY35 253 aa11.71□□□□□ -0.53
SND1-213ENST00000486037 FBXO40Q9UH90 709 aa11.71□□□□□ -0.53
SND1-213ENST00000486037 CACNA1BQ00975 2339 aa11.71□□□□□ -0.54
SND1-213ENST00000486037 FAM186AA6NE01 2351 aa11.7□□□□□ -0.54
SND1-213ENST00000486037 USP17L12C9JPN9 530 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms