RNA–Protein interactions for RNA: ENST00000485883.5

CHRD-215, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-215ENST00000485883 EXOC6Q8TAG9 804 aa23.94■■□□□ 1.42
CHRD-215ENST00000485883 HIPK3Q9H422 1215 aa23.94■■□□□ 1.42
CHRD-215ENST00000485883 Q9Y3F1 56 aa23.94■■□□□ 1.42
CHRD-215ENST00000485883 CCDC171Q6TFL3 1326 aa23.93■■□□□ 1.42
CHRD-215ENST00000485883 PTPDC1A2A3K4 754 aa23.93■■□□□ 1.42
CHRD-215ENST00000485883 TRIM6-TRIM34B2RNG4 842 aa23.93■■□□□ 1.42
CHRD-215ENST00000485883 ZEB2O60315 1214 aa23.93■■□□□ 1.42
CHRD-215ENST00000485883 USP38Q8NB14 1042 aa23.93■■□□□ 1.42
CHRD-215ENST00000485883 RILPL2Q969X0 211 aa23.93■■□□□ 1.42
CHRD-215ENST00000485883 IL23AQ9NPF7 189 aa23.93■■□□□ 1.42
CHRD-215ENST00000485883 CXXC1Q9P0U4 656 aaPredicted RBP23.93■■□□□ 1.42
CHRD-215ENST00000485883 CALML3P27482 149 aa23.92■■□□□ 1.42
CHRD-215ENST00000485883 CCL23P55773 120 aa23.92■■□□□ 1.42
CHRD-215ENST00000485883 ZNF543Q08ER8 600 aa23.92■■□□□ 1.42
CHRD-215ENST00000485883 DUSP28Q4G0W2 176 aa23.92■■□□□ 1.42
CHRD-215ENST00000485883 AKNAD1Q5T1N1 836 aa23.92■■□□□ 1.42
CHRD-215ENST00000485883 PSRC1Q6PGN9 363 aaPredicted RBP23.92■■□□□ 1.42
CHRD-215ENST00000485883 NOC4LQ9BVI4 516 aaKnown RBP23.92■■□□□ 1.42
CHRD-215ENST00000485883 ZMYM6O95789 1325 aa23.91■■□□□ 1.42
CHRD-215ENST00000485883 SPTBN5Q9NRC6 3674 aaKnown RBP23.91■■□□□ 1.42
CHRD-215ENST00000485883 B4GALNT3Q6L9W6 998 aa23.91■■□□□ 1.42
CHRD-215ENST00000485883 MFSD6Q6ZSS7 791 aa23.91■■□□□ 1.42
CHRD-215ENST00000485883 HERVK_113Q902F9 699 aa23.91■■□□□ 1.42
CHRD-215ENST00000485883 ZKSCAN3Q9BRR0 538 aa23.91■■□□□ 1.42
CHRD-215ENST00000485883 WDR11Q9BZH6 1224 aa23.91■■□□□ 1.42
CHRD-215ENST00000485883 WNT8AQ9H1J5 351 aa23.91■■□□□ 1.42
CHRD-215ENST00000485883 ADD3Q9UEY8 706 aaKnown RBP23.91■■□□□ 1.42
CHRD-215ENST00000485883 NEDD4P46934 1319 aa23.9■■□□□ 1.42
CHRD-215ENST00000485883 SNHG28P0DPA3 235 aa23.9■■□□□ 1.42
CHRD-215ENST00000485883 CPVLQ9H3G5 476 aa23.9■■□□□ 1.42
CHRD-215ENST00000485883 GOLGA8HP0CJ92 632 aa23.89■■□□□ 1.41
CHRD-215ENST00000485883 SDSP20132 328 aa23.89■■□□□ 1.41
CHRD-215ENST00000485883 RPS6P62753 249 aaKnown RBP23.89■■□□□ 1.41
CHRD-215ENST00000485883 RNF207Q6ZRF8 634 aa23.89■■□□□ 1.41
CHRD-215ENST00000485883 OTOP2Q7RTS6 562 aa23.89■■□□□ 1.41
CHRD-215ENST00000485883 VWCEQ96DN2 955 aa23.89■■□□□ 1.41
CHRD-215ENST00000485883 TTC14Q96N46 770 aa23.89■■□□□ 1.41
CHRD-215ENST00000485883 RBM47A0AV96 593 aaKnown RBP23.88■■□□□ 1.41
CHRD-215ENST00000485883 FGBP02675 491 aa23.88■■□□□ 1.41
CHRD-215ENST00000485883 TICAM2Q86XR7 235 aa23.88■■□□□ 1.41
CHRD-215ENST00000485883 SMC5Q8IY18 1101 aa23.88■■□□□ 1.41
CHRD-215ENST00000485883 PPP1R13LQ8WUF5 828 aa23.88■■□□□ 1.41
CHRD-215ENST00000485883 SCLYQ96I15 445 aa23.88■■□□□ 1.41
CHRD-215ENST00000485883 ALDH8A1Q9H2A2 487 aaPredicted RBP23.88■■□□□ 1.41
CHRD-215ENST00000485883 TRMT13Q9NUP7 481 aaKnown RBP23.88■■□□□ 1.41
CHRD-215ENST00000485883 MYL3P08590 195 aa23.87■■□□□ 1.41
CHRD-215ENST00000485883 PURAQ00577 322 aaKnown RBP23.87■■□□□ 1.41
CHRD-215ENST00000485883 OR6J1Q8NGC5 347 aa23.87■■□□□ 1.41
CHRD-215ENST00000485883 COPS5Q92905 334 aa23.87■■□□□ 1.41
CHRD-215ENST00000485883 UBA5Q9GZZ9 404 aa23.87■■□□□ 1.41
CHRD-215ENST00000485883 PRDM12Q9H4Q4 367 aa23.87■■□□□ 1.41
CHRD-215ENST00000485883 LOC102724159A0A0B4J2E5 919 aa23.86■■□□□ 1.41
CHRD-215ENST00000485883 PCP11498 1178 aaKnown RBP23.86■■□□□ 1.41
CHRD-215ENST00000485883 CYP2C9P11712 490 aa23.86■■□□□ 1.41
CHRD-215ENST00000485883 PWP2Q15269 919 aaKnown RBP23.86■■□□□ 1.41
CHRD-215ENST00000485883 USH1GQ495M9 461 aa23.86■■□□□ 1.41
CHRD-215ENST00000485883 PLEKHM2Q8IWE5 1019 aa23.86■■□□□ 1.41
CHRD-215ENST00000485883 SEZ6LQ9BYH1 1024 aa23.86■■□□□ 1.41
CHRD-215ENST00000485883 PRDM6Q9NQX0 595 aa23.86■■□□□ 1.41
CHRD-215ENST00000485883 YBX2Q9Y2T7 364 aaKnown RBP23.86■■□□□ 1.41
CHRD-215ENST00000485883 WDR19Q8NEZ3 1342 aa23.85■■□□□ 1.41
CHRD-215ENST00000485883 IGHDP01880 384 aa23.85■■□□□ 1.41
CHRD-215ENST00000485883 EDNRBP24530 442 aa23.85■■□□□ 1.41
CHRD-215ENST00000485883 PDE4DQ08499 809 aa23.85■■□□□ 1.41
CHRD-215ENST00000485883 ESR2Q92731 530 aa23.85■■□□□ 1.41
CHRD-215ENST00000485883 NKX2-4Q9H2Z4 354 aa23.85■■□□□ 1.41
CHRD-215ENST00000485883 RNF41Q9H4P4 317 aaPredicted RBP23.85■■□□□ 1.41
CHRD-215ENST00000485883 POLR3EQ9NVU0 708 aa23.85■■□□□ 1.41
CHRD-215ENST00000485883 MYO9BQ13459 2157 aa23.85■■□□□ 1.41
CHRD-215ENST00000485883 CHD9Q3L8U1 2897 aa23.85■■□□□ 1.41
CHRD-215ENST00000485883 ZNF213O14771 459 aa23.84■■□□□ 1.41
CHRD-215ENST00000485883 CPT1AP50416 773 aa23.84■■□□□ 1.41
CHRD-215ENST00000485883 ADGRE1Q14246 886 aa23.84■■□□□ 1.41
CHRD-215ENST00000485883 CWC27Q6UX04 472 aaKnown RBP23.84■■□□□ 1.41
CHRD-215ENST00000485883 CHD1LQ86WJ1 897 aa23.84■■□□□ 1.41
CHRD-215ENST00000485883 PPM1EQ8WY54 764 aa23.84■■□□□ 1.41
CHRD-215ENST00000485883 TBC1D5Q92609 795 aa23.84■■□□□ 1.41
CHRD-215ENST00000485883 MSRAQ9UJ68 235 aa23.84■■□□□ 1.41
CHRD-215ENST00000485883 TNKSO95271 1327 aa23.84■■□□□ 1.41
CHRD-215ENST00000485883 ARIH2O95376 493 aa23.83■■□□□ 1.41
CHRD-215ENST00000485883 RABGGTBP53611 331 aa23.83■■□□□ 1.41
CHRD-215ENST00000485883 PPP2R5BQ15173 497 aa23.83■■□□□ 1.41
CHRD-215ENST00000485883 DNERQ8NFT8 737 aa23.83■■□□□ 1.41
CHRD-215ENST00000485883 GAS2L1Q99501 681 aaPredicted RBP23.83■■□□□ 1.41
CHRD-215ENST00000485883 MTG1Q9BT17 334 aaPredicted RBP23.83■■□□□ 1.41
CHRD-215ENST00000485883 MTIF3Q9H2K0 278 aaKnown RBP23.83■■□□□ 1.41
CHRD-215ENST00000485883 PNMA2Q9UL42 364 aa23.83■■□□□ 1.41
CHRD-215ENST00000485883 KDM4AO75164 1064 aa23.82■■□□□ 1.4
CHRD-215ENST00000485883 MFAP1P55081 439 aaKnown RBP23.82■■□□□ 1.4
CHRD-215ENST00000485883 RAB30Q15771 203 aa23.82■■□□□ 1.4
CHRD-215ENST00000485883 NBPF20Q3BBV1 942 aa23.82■■□□□ 1.4
CHRD-215ENST00000485883 GPATCH4Q5T3I0 446 aaKnown RBP23.82■■□□□ 1.4
CHRD-215ENST00000485883 DGKHQ86XP1 1220 aa23.82■■□□□ 1.4
CHRD-215ENST00000485883 OSBPL3Q9H4L5 887 aa23.82■■□□□ 1.4
CHRD-215ENST00000485883 GPHNQ9NQX3 736 aaPredicted RBP23.82■■□□□ 1.4
CHRD-215ENST00000485883 CHD7Q9P2D1 2997 aa23.81■■□□□ 1.4
CHRD-215ENST00000485883 B4E1Z4 1266 aa23.81■■□□□ 1.4
CHRD-215ENST00000485883 MYOGP15173 224 aa23.81■■□□□ 1.4
CHRD-215ENST00000485883 NUCB1Q02818 461 aa23.81■■□□□ 1.4
CHRD-215ENST00000485883 CDC37Q16543 378 aaPredicted RBP23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms