RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 FBXO16Q8IX29 292 aaPredicted RBP18.82■□□□□ 0.6
DDR1-246ENST00000485023 SRBD1Q8N5C6 995 aaKnown RBP18.82■□□□□ 0.6
DDR1-246ENST00000485023 FANCBQ8NB91 859 aa18.82■□□□□ 0.6
DDR1-246ENST00000485023 ABHD16BQ9H3Z7 469 aa18.82■□□□□ 0.6
DDR1-246ENST00000485023 C11orf49Q9H6J7 331 aa18.82■□□□□ 0.6
DDR1-246ENST00000485023 XPNPEP3Q9NQH7 507 aa18.82■□□□□ 0.6
DDR1-246ENST00000485023 ADD3Q9UEY8 706 aaKnown RBP18.82■□□□□ 0.6
DDR1-246ENST00000485023 PNMA6FA0A0J9YX94 578 aa18.81■□□□□ 0.6
DDR1-246ENST00000485023 GOLGA8AA7E2F4 631 aa18.81■□□□□ 0.6
DDR1-246ENST00000485023 GOLGA8BA8MQT2 603 aa18.81■□□□□ 0.6
DDR1-246ENST00000485023 ZBTB43O43298 467 aa18.81■□□□□ 0.6
DDR1-246ENST00000485023 ADCY6O43306 1168 aa18.81■□□□□ 0.6
DDR1-246ENST00000485023 PGK1P00558 417 aa18.81■□□□□ 0.6
DDR1-246ENST00000485023 PSMA5P28066 241 aa18.81■□□□□ 0.6
DDR1-246ENST00000485023 GNAQP50148 359 aa18.81■□□□□ 0.6
DDR1-246ENST00000485023 CCDC144BQ3MJ40 725 aa18.81■□□□□ 0.6
DDR1-246ENST00000485023 MCF2L2Q86YR7 1114 aa18.81■□□□□ 0.6
DDR1-246ENST00000485023 DPF3Q92784 378 aa18.81■□□□□ 0.6
DDR1-246ENST00000485023 BRF1Q92994 677 aa18.81■□□□□ 0.6
DDR1-246ENST00000485023 RRP36Q96EU6 259 aaKnown RBP18.81■□□□□ 0.6
DDR1-246ENST00000485023 SPZ1Q9BXG8 430 aa18.81■□□□□ 0.6
DDR1-246ENST00000485023 KATNBL1Q9H079 304 aa18.81■□□□□ 0.6
DDR1-246ENST00000485023 COL20A1Q9P218 1284 aa18.81■□□□□ 0.6
DDR1-246ENST00000485023 FAM184BQ9ULE4 1060 aa18.81■□□□□ 0.6
DDR1-246ENST00000485023 OPLAHO14841 1288 aa18.8■□□□□ 0.6
DDR1-246ENST00000485023 EPB41L2O43491 1005 aaKnown RBP18.8■□□□□ 0.6
DDR1-246ENST00000485023 CAPN2P17655 700 aa18.8■□□□□ 0.6
DDR1-246ENST00000485023 ADCYAP1R1P41586 468 aa18.8■□□□□ 0.6
DDR1-246ENST00000485023 RTN1Q16799 776 aa18.8■□□□□ 0.6
DDR1-246ENST00000485023 TMTC3Q6ZXV5 915 aa18.8■□□□□ 0.6
DDR1-246ENST00000485023 SYTL5Q8TDW5 730 aaPredicted RBP18.8■□□□□ 0.6
DDR1-246ENST00000485023 LZTS2Q9BRK4 669 aa18.8■□□□□ 0.6
DDR1-246ENST00000485023 HTATIP2Q9BUP3 242 aa18.8■□□□□ 0.6
DDR1-246ENST00000485023 UPF3BQ9BZI7 483 aaKnown RBP18.8■□□□□ 0.6
DDR1-246ENST00000485023 SEC63Q9UGP8 760 aaKnown RBP18.8■□□□□ 0.6
DDR1-246ENST00000485023 MYH6P13533 1939 aa18.8■□□□□ 0.6
DDR1-246ENST00000485023 MCM3APO60318 1980 aa18.79■□□□□ 0.6
DDR1-246ENST00000485023 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.79■□□□□ 0.6
DDR1-246ENST00000485023 DNM1LO00429 736 aa18.79■□□□□ 0.6
DDR1-246ENST00000485023 PTGS1P23219 599 aa18.79■□□□□ 0.6
DDR1-246ENST00000485023 HOXA13P31271 388 aaPredicted RBP18.79■□□□□ 0.6
DDR1-246ENST00000485023 PDE4DQ08499 809 aa18.79■□□□□ 0.6
DDR1-246ENST00000485023 NOL8Q76FK4 1167 aaKnown RBP18.79■□□□□ 0.6
DDR1-246ENST00000485023 TAAR1Q96RJ0 339 aa18.79■□□□□ 0.6
DDR1-246ENST00000485023 PDGFCQ9NRA1 345 aa18.79■□□□□ 0.6
DDR1-246ENST00000485023 SYNRGQ9UMZ2 1314 aa18.78■□□□□ 0.6
DDR1-246ENST00000485023 KBTBD13C9JR72 458 aa18.78■□□□□ 0.6
DDR1-246ENST00000485023 IRX5P78411 483 aaPredicted RBP18.78■□□□□ 0.6
DDR1-246ENST00000485023 LRRC41Q15345 812 aa18.78■□□□□ 0.6
DDR1-246ENST00000485023 RUFY3Q7L099 469 aa18.78■□□□□ 0.6
DDR1-246ENST00000485023 ARRDC4Q8NCT1 418 aa18.78■□□□□ 0.6
DDR1-246ENST00000485023 RGS22Q8NE09 1264 aa18.78■□□□□ 0.6
DDR1-246ENST00000485023 SENP6Q9GZR1 1112 aaPredicted RBP18.78■□□□□ 0.6
DDR1-246ENST00000485023 CNTNAP5Q8WYK1 1306 aa18.77■□□□□ 0.6
DDR1-246ENST00000485023 SEC24BO95487 1268 aa18.77■□□□□ 0.6
DDR1-246ENST00000485023 COL6A1P12109 1028 aa18.77■□□□□ 0.6
DDR1-246ENST00000485023 METAP2P50579 478 aaKnown RBP eCLIP18.77■□□□□ 0.6
DDR1-246ENST00000485023 TMEM63BQ5T3F8 832 aa18.77■□□□□ 0.6
DDR1-246ENST00000485023 FERMT2Q96AC1 680 aa18.77■□□□□ 0.6
DDR1-246ENST00000485023 MPHOSPH6Q99547 160 aaKnown RBP18.77■□□□□ 0.6
DDR1-246ENST00000485023 LARP6Q9BRS8 491 aaKnown RBP18.77■□□□□ 0.6
DDR1-246ENST00000485023 ZSWIM6Q9HCJ5 1215 aa18.77■□□□□ 0.6
DDR1-246ENST00000485023 RBM28Q9NW13 759 aaKnown RBP18.77■□□□□ 0.6
DDR1-246ENST00000485023 CYP46A1Q9Y6A2 500 aa18.77■□□□□ 0.6
DDR1-246ENST00000485023 MYADML2A6NDP7 307 aa18.76■□□□□ 0.59
DDR1-246ENST00000485023 EIF2AK2P19525 551 aaKnown RBP18.76■□□□□ 0.59
DDR1-246ENST00000485023 SMARCA1P28370 1054 aa18.76■□□□□ 0.59
DDR1-246ENST00000485023 CDC27P30260 824 aa18.76■□□□□ 0.59
DDR1-246ENST00000485023 HSD17B4P51659 736 aa18.76■□□□□ 0.59
DDR1-246ENST00000485023 ATN1P54259 1190 aaPredicted RBP18.76■□□□□ 0.59
DDR1-246ENST00000485023 TNFAIP2Q03169 654 aa18.76■□□□□ 0.59
DDR1-246ENST00000485023 TRAF1Q13077 416 aa18.76■□□□□ 0.59
DDR1-246ENST00000485023 HEATR3Q7Z4Q2 680 aa18.76■□□□□ 0.59
DDR1-246ENST00000485023 RNF180Q86T96 592 aa18.76■□□□□ 0.59
DDR1-246ENST00000485023 FCHSD1Q86WN1 690 aa18.76■□□□□ 0.59
DDR1-246ENST00000485023 DNERQ8NFT8 737 aa18.76■□□□□ 0.59
DDR1-246ENST00000485023 MORC4Q8TE76 937 aa18.76■□□□□ 0.59
DDR1-246ENST00000485023 GPKOWQ92917 476 aaPredicted RBP eCLIP18.76■□□□□ 0.59
DDR1-246ENST00000485023 RMDN3Q96TC7 470 aa18.76■□□□□ 0.59
DDR1-246ENST00000485023 VTA1Q9NP79 307 aa18.76■□□□□ 0.59
DDR1-246ENST00000485023 GCOM1H8Y6P7 765 aaPredicted RBP18.75■□□□□ 0.59
DDR1-246ENST00000485023 EVI5O60447 810 aa18.75■□□□□ 0.59
DDR1-246ENST00000485023 ADAMTS4O75173 837 aa18.75■□□□□ 0.59
DDR1-246ENST00000485023 DUSP11O75319 330 aaKnown RBP18.75■□□□□ 0.59
DDR1-246ENST00000485023 C6orf222P0C671 652 aaPredicted RBP18.75■□□□□ 0.59
DDR1-246ENST00000485023 POLR2MP0CAP2 368 aa18.75■□□□□ 0.59
DDR1-246ENST00000485023 SMPD1P17405 629 aa18.75■□□□□ 0.59
DDR1-246ENST00000485023 ARHGEF16Q5VV41 709 aa18.75■□□□□ 0.59
DDR1-246ENST00000485023 TAPT1Q6NXT6 567 aa18.75■□□□□ 0.59
DDR1-246ENST00000485023 C7orf61Q8IZ16 206 aa18.75■□□□□ 0.59
DDR1-246ENST00000485023 NSUN6Q8TEA1 469 aaKnown RBP18.75■□□□□ 0.59
DDR1-246ENST00000485023 BAZ2BQ9UIF8 2168 aaKnown RBP18.75■□□□□ 0.59
DDR1-246ENST00000485023 PPFIA3O75145 1194 aa18.74■□□□□ 0.59
DDR1-246ENST00000485023 EDNRBP24530 442 aa18.74■□□□□ 0.59
DDR1-246ENST00000485023 ADD1P35611 737 aaKnown RBP18.74■□□□□ 0.59
DDR1-246ENST00000485023 TOB2Q14106 344 aaPredicted RBP18.74■□□□□ 0.59
DDR1-246ENST00000485023 LRRC26Q2I0M4 334 aa18.74■□□□□ 0.59
DDR1-246ENST00000485023 PXMP2Q9NR77 195 aa18.74■□□□□ 0.59
DDR1-246ENST00000485023 FAM217BQ9NTX9 383 aaPredicted RBP18.74■□□□□ 0.59
DDR1-246ENST00000485023 H0YGN5 161 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms