RNA–Protein interactions for RNA: ENST00000484988.2

SGIP1-211, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-211ENST00000484988 SIGLEC10Q96LC7 697 aa4.65□□□□□ -1.67
SGIP1-211ENST00000484988 GMLQ99445 158 aa4.65□□□□□ -1.67
SGIP1-211ENST00000484988 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.65□□□□□ -1.67
SGIP1-211ENST00000484988 IRF2BPLQ9H1B7 796 aa4.65□□□□□ -1.67
SGIP1-211ENST00000484988 EPB41L4AQ9HCS5 686 aaPredicted RBP4.65□□□□□ -1.67
SGIP1-211ENST00000484988 PCDHA5Q9Y5H7 936 aa4.65□□□□□ -1.67
SGIP1-211ENST00000484988 TRBV23OR9-2A0A075B6M9 112 aa4.64□□□□□ -1.67
SGIP1-211ENST00000484988 NOP56O00567 594 aaKnown RBP4.64□□□□□ -1.67
SGIP1-211ENST00000484988 GLI4P10075 376 aa4.64□□□□□ -1.67
SGIP1-211ENST00000484988 PAMP19021 973 aa4.64□□□□□ -1.67
SGIP1-211ENST00000484988 PLEKHN1Q494U1 663 aaPredicted RBP4.64□□□□□ -1.67
SGIP1-211ENST00000484988 BICRALQ6AI39 1079 aa4.64□□□□□ -1.67
SGIP1-211ENST00000484988 GTF2IRD2BQ6EKJ0 949 aa4.64□□□□□ -1.67
SGIP1-211ENST00000484988 ZC3H14Q6PJT7 736 aaKnown RBP4.64□□□□□ -1.67
SGIP1-211ENST00000484988 GTF2IRD2Q86UP8 949 aa4.64□□□□□ -1.67
SGIP1-211ENST00000484988 CPNE8Q86YQ8 564 aa4.64□□□□□ -1.67
SGIP1-211ENST00000484988 CRACR2BQ8N4Y2 399 aaPredicted RBP4.64□□□□□ -1.67
SGIP1-211ENST00000484988 MICAL1Q8TDZ2 1067 aa4.64□□□□□ -1.67
SGIP1-211ENST00000484988 DACT3Q96B18 629 aaPredicted RBP4.64□□□□□ -1.67
SGIP1-211ENST00000484988 MMP19Q99542 508 aa4.64□□□□□ -1.67
SGIP1-211ENST00000484988 MTA3Q9BTC8 594 aa4.64□□□□□ -1.67
SGIP1-211ENST00000484988 ZNF408Q9H9D4 720 aa4.64□□□□□ -1.67
SGIP1-211ENST00000484988 CYP26B1Q9NR63 512 aa4.64□□□□□ -1.67
SGIP1-211ENST00000484988 IRAK3Q9Y616 596 aa4.64□□□□□ -1.67
SGIP1-211ENST00000484988 NPHP3-ACAD11A0A0J9YXS1 232 aa4.63□□□□□ -1.67
SGIP1-211ENST00000484988 A0A1W2PQJ5 194 aa4.63□□□□□ -1.67
SGIP1-211ENST00000484988 C7orf72A4D263 438 aa4.63□□□□□ -1.67
SGIP1-211ENST00000484988 B2RBV5 119 aa4.63□□□□□ -1.67
SGIP1-211ENST00000484988 CAPNS1P04632 268 aa4.63□□□□□ -1.67
SGIP1-211ENST00000484988 PI3P19957 117 aa4.63□□□□□ -1.67
SGIP1-211ENST00000484988 FBLN1P23142 703 aa4.63□□□□□ -1.67
SGIP1-211ENST00000484988 IGFBP6P24592 240 aaPredicted RBP4.63□□□□□ -1.67
SGIP1-211ENST00000484988 TACR1P25103 407 aa4.63□□□□□ -1.67
SGIP1-211ENST00000484988 RANGAP1P46060 587 aaPredicted RBP4.63□□□□□ -1.67
SGIP1-211ENST00000484988 SCRN1Q12765 414 aa4.63□□□□□ -1.67
SGIP1-211ENST00000484988 FXNQ16595 210 aa4.63□□□□□ -1.67
SGIP1-211ENST00000484988 LCE4AQ5TA78 99 aa4.63□□□□□ -1.67
SGIP1-211ENST00000484988 LARP1BQ659C4 914 aaKnown RBP4.63□□□□□ -1.67
SGIP1-211ENST00000484988 MRM1Q6IN84 353 aaKnown RBP4.63□□□□□ -1.67
SGIP1-211ENST00000484988 LGR4Q9BXB1 951 aa4.63□□□□□ -1.67
SGIP1-211ENST00000484988 NKX2-4Q9H2Z4 354 aa4.63□□□□□ -1.67
SGIP1-211ENST00000484988 GPRC5CQ9NQ84 441 aa4.63□□□□□ -1.67
SGIP1-211ENST00000484988 FBLN5Q9UBX5 448 aa4.63□□□□□ -1.67
SGIP1-211ENST00000484988 HCFC2Q9Y5Z7 792 aa4.63□□□□□ -1.67
SGIP1-211ENST00000484988 F8W031 263 aaPredicted RBP4.62□□□□□ -1.67
SGIP1-211ENST00000484988 RFXAPO00287 272 aa4.62□□□□□ -1.67
SGIP1-211ENST00000484988 SUSD5O60279 629 aa4.62□□□□□ -1.67
SGIP1-211ENST00000484988 DDAH1O94760 285 aa4.62□□□□□ -1.67
SGIP1-211ENST00000484988 ITGAVP06756 1048 aa4.62□□□□□ -1.67
SGIP1-211ENST00000484988 PLS3P13797 630 aa4.62□□□□□ -1.67
SGIP1-211ENST00000484988 DNAJA1P31689 397 aaKnown RBP4.62□□□□□ -1.67
SGIP1-211ENST00000484988 FAM129CQ86XR2 697 aa4.62□□□□□ -1.67
SGIP1-211ENST00000484988 TMEM151BQ8IW70 566 aa4.62□□□□□ -1.67
SGIP1-211ENST00000484988 LZTR1Q8N653 840 aa4.62□□□□□ -1.67
SGIP1-211ENST00000484988 NPLOC4Q8TAT6 608 aa4.62□□□□□ -1.67
SGIP1-211ENST00000484988 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
SGIP1-211ENST00000484988 CLEC1BQ9P126 229 aa4.62□□□□□ -1.67
SGIP1-211ENST00000484988 RWDD3Q9Y3V2 267 aa4.62□□□□□ -1.67
SGIP1-211ENST00000484988 ZC3H12DA2A288 527 aaKnown RBP4.61□□□□□ -1.67
SGIP1-211ENST00000484988 E9PSI1 815 aa4.61□□□□□ -1.67
SGIP1-211ENST00000484988 ARNTLO00327 626 aa4.61□□□□□ -1.67
SGIP1-211ENST00000484988 TBX1O43435 398 aa4.61□□□□□ -1.67
SGIP1-211ENST00000484988 NPHS1O60500 1241 aa4.61□□□□□ -1.67
SGIP1-211ENST00000484988 BUB1BO60566 1050 aaPredicted RBP4.61□□□□□ -1.67
SGIP1-211ENST00000484988 GJB6O95452 261 aa4.61□□□□□ -1.67
SGIP1-211ENST00000484988 SCG5P05408 212 aa4.61□□□□□ -1.67
SGIP1-211ENST00000484988 THBDP07204 575 aa4.61□□□□□ -1.67
SGIP1-211ENST00000484988 HOXC12P31275 282 aa4.61□□□□□ -1.67
SGIP1-211ENST00000484988 NCKAP1LP55160 1127 aa4.61□□□□□ -1.67
SGIP1-211ENST00000484988 PRR5P85299 388 aa4.61□□□□□ -1.67
SGIP1-211ENST00000484988 ZNF200P98182 395 aaPredicted RBP4.61□□□□□ -1.67
SGIP1-211ENST00000484988 TCERG1LQ5VWI1 586 aa4.61□□□□□ -1.67
SGIP1-211ENST00000484988 MBLAC2Q68D91 279 aa4.61□□□□□ -1.67
SGIP1-211ENST00000484988 TTLL10Q6ZVT0 673 aa4.61□□□□□ -1.67
SGIP1-211ENST00000484988 ZNF227Q86WZ6 799 aa4.61□□□□□ -1.67
SGIP1-211ENST00000484988 NETO2Q8NC67 525 aa4.61□□□□□ -1.67
SGIP1-211ENST00000484988 PLEKHO2Q8TD55 490 aa4.61□□□□□ -1.67
SGIP1-211ENST00000484988 FRS2Q8WU20 508 aa4.61□□□□□ -1.67
SGIP1-211ENST00000484988 BTN2A2Q8WVV5 523 aa4.61□□□□□ -1.67
SGIP1-211ENST00000484988 DPF3Q92784 378 aa4.61□□□□□ -1.67
SGIP1-211ENST00000484988 PPP1R14AQ96A00 147 aa4.61□□□□□ -1.67
SGIP1-211ENST00000484988 TSPAN17Q96FV3 270 aa4.61□□□□□ -1.67
SGIP1-211ENST00000484988 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.61□□□□□ -1.67
SGIP1-211ENST00000484988 GULP1Q9UBP9 304 aa4.61□□□□□ -1.67
SGIP1-211ENST00000484988 PLA2G2DQ9UNK4 145 aa4.61□□□□□ -1.67
SGIP1-211ENST00000484988 KLF4O43474 513 aa4.6□□□□□ -1.67
SGIP1-211ENST00000484988 ATF2P15336 505 aa4.6□□□□□ -1.67
SGIP1-211ENST00000484988 AFF3P51826 1226 aaKnown RBP4.6□□□□□ -1.67
SGIP1-211ENST00000484988 RBM10P98175 930 aaKnown RBP4.6□□□□□ -1.67
SGIP1-211ENST00000484988 CAP1Q01518 475 aa4.6□□□□□ -1.67
SGIP1-211ENST00000484988 TESK1Q15569 626 aa4.6□□□□□ -1.67
SGIP1-211ENST00000484988 TARBP2Q15633 366 aaKnown RBP4.6□□□□□ -1.67
SGIP1-211ENST00000484988 INF2Q27J81 1249 aa4.6□□□□□ -1.67
SGIP1-211ENST00000484988 SV2CQ496J9 727 aa4.6□□□□□ -1.67
SGIP1-211ENST00000484988 CNKSR3Q6P9H4 555 aa4.6□□□□□ -1.67
SGIP1-211ENST00000484988 CABP7Q86V35 215 aa4.6□□□□□ -1.67
SGIP1-211ENST00000484988 KREMEN2Q8NCW0 462 aa4.6□□□□□ -1.67
SGIP1-211ENST00000484988 EPN3Q9H201 632 aa4.6□□□□□ -1.67
SGIP1-211ENST00000484988 PODXL2Q9NZ53 605 aa4.6□□□□□ -1.67
SGIP1-211ENST00000484988 RAPGEFL1Q9UHV5 662 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms