RNA–Protein interactions for RNA: ENST00000484767.5

SND1-211, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-211ENST00000484767 IDEP14735 1019 aa10.24□□□□□ -0.77
SND1-211ENST00000484767 TRIM21P19474 475 aaKnown RBP10.24□□□□□ -0.77
SND1-211ENST00000484767 TNNT3P45378 269 aaPredicted RBP10.24□□□□□ -0.77
SND1-211ENST00000484767 CRKLP46109 303 aaKnown RBP10.24□□□□□ -0.77
SND1-211ENST00000484767 PPFIA1Q13136 1202 aa10.24□□□□□ -0.77
SND1-211ENST00000484767 RCSD1Q6JBY9 416 aa10.24□□□□□ -0.77
SND1-211ENST00000484767 EMBQ6PCB8 327 aa10.24□□□□□ -0.77
SND1-211ENST00000484767 CCDC84Q86UT8 332 aaPredicted RBP10.24□□□□□ -0.77
SND1-211ENST00000484767 EFCAB13Q8IY85 973 aa10.24□□□□□ -0.77
SND1-211ENST00000484767 PLCD3Q8N3E9 789 aa10.24□□□□□ -0.77
SND1-211ENST00000484767 RNF10Q8N5U6 811 aaKnown RBP10.24□□□□□ -0.77
SND1-211ENST00000484767 FAM76AQ8TAV0 307 aa10.24□□□□□ -0.77
SND1-211ENST00000484767 AENQ8WTP8 325 aaKnown RBP10.24□□□□□ -0.77
SND1-211ENST00000484767 PPM1EQ8WY54 764 aa10.24□□□□□ -0.77
SND1-211ENST00000484767 STAMQ92783 540 aa10.24□□□□□ -0.77
SND1-211ENST00000484767 SMARCC1Q92922 1105 aaPredicted RBP10.24□□□□□ -0.77
SND1-211ENST00000484767 FAM84BQ96KN1 310 aaPredicted RBP10.24□□□□□ -0.77
SND1-211ENST00000484767 CNOT6LQ96LI5 555 aaKnown RBP10.24□□□□□ -0.77
SND1-211ENST00000484767 ALS2CR12Q96Q35 445 aa10.24□□□□□ -0.77
SND1-211ENST00000484767 STK17AQ9UEE5 414 aa10.24□□□□□ -0.77
SND1-211ENST00000484767 SNX12Q9UMY4 172 aa10.24□□□□□ -0.77
SND1-211ENST00000484767 PLAGL2Q9UPG8 496 aa10.24□□□□□ -0.77
SND1-211ENST00000484767 NIP7Q9Y221 180 aaKnown RBP eCLIP10.24□□□□□ -0.77
SND1-211ENST00000484767 HYOU1Q9Y4L1 999 aa10.24□□□□□ -0.77
SND1-211ENST00000484767 COL16A1Q07092 1604 aaPredicted RBP10.24□□□□□ -0.77
SND1-211ENST00000484767 ATXN2Q99700 1313 aaKnown RBP10.24□□□□□ -0.77
SND1-211ENST00000484767 NRAPQ86VF7 1730 aa10.24□□□□□ -0.77
SND1-211ENST00000484767 CDK5RAP2Q96SN8 1893 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 SSU72P8A0A1W2PR75 194 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 ESYT2A0FGR8 921 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 TSPY2A6NKD2 308 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 SLC26A4O43511 780 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 N4BP1O75113 896 aaKnown RBP10.23□□□□□ -0.77
SND1-211ENST00000484767 ABL1P00519 1130 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 OR52Z1P0C646 297 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 MTIF2P46199 727 aaKnown RBP10.23□□□□□ -0.77
SND1-211ENST00000484767 EPHB4P54760 987 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 GYS2P54840 703 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 PSMD2Q13200 908 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 DNAJC21Q5F1R6 531 aaKnown RBP10.23□□□□□ -0.77
SND1-211ENST00000484767 CENPPQ6IPU0 288 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 CABP7Q86V35 215 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 SPATS2Q86XZ4 545 aaKnown RBP10.23□□□□□ -0.77
SND1-211ENST00000484767 C1orf131Q8NDD1 294 aaKnown RBP10.23□□□□□ -0.77
SND1-211ENST00000484767 RASSF8Q8NHQ8 419 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 CAVIN3Q969G5 261 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 CCDC42Q96M95 316 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 SELENOOQ9BVL4 669 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 SPZ1Q9BXG8 430 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 TRIM9Q9C026 710 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 SH2D4AQ9H788 454 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 SUGCTQ9HAC7 445 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 ZNF287Q9HBT7 754 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 LUC7LQ9NQ29 371 aaKnown RBP10.23□□□□□ -0.77
SND1-211ENST00000484767 BARHL2Q9NY43 387 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 PCDHA6Q9UN73 950 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 PCDHA8Q9Y5H6 950 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 DDX60LQ5H9U9 1706 aaKnown RBP10.23□□□□□ -0.77
SND1-211ENST00000484767 FLT1P17948 1338 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 SBF2Q86WG5 1849 aa10.23□□□□□ -0.77
SND1-211ENST00000484767 COL4A1P02462 1669 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 A0A087WUV0 522 aaPredicted RBP10.22□□□□□ -0.77
SND1-211ENST00000484767 CYP2D7A0A087X1C5 515 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 hCG_1642624A0A1W2PR95 340 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 TRIM49BA6NDI0 452 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 SRRM3A6NNA2 597 aaPredicted RBP10.22□□□□□ -0.77
SND1-211ENST00000484767 B4DLN1 442 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 SNAP23O00161 211 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 STXBP3O00186 592 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 GNA11P29992 359 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 GYG1P46976 350 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 GSTO1P78417 241 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 SKOR1P84550 965 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 MECOMQ03112 1051 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 LRRC63Q05C16 580 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 PDE4DQ08499 809 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 SEPT2Q15019 361 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 MAN2A1Q16706 1144 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 MIIPQ5JXC2 388 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 C12orf60Q5U649 245 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 C10orf67Q8IYJ2 551 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 GUF1Q8N442 669 aaKnown RBP10.22□□□□□ -0.77
SND1-211ENST00000484767 PNMA1Q8ND90 353 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.22□□□□□ -0.77
SND1-211ENST00000484767 SYN2Q92777 582 aaPredicted RBP10.22□□□□□ -0.77
SND1-211ENST00000484767 CALML4Q96GE6 196 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 SH3GL2Q99962 352 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 NOC4LQ9BVI4 516 aaKnown RBP10.22□□□□□ -0.77
SND1-211ENST00000484767 ZMYND12Q9H0C1 365 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 RIC8AQ9NPQ8 531 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 BTG4Q9NY30 223 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 MINPP1Q9UNW1 487 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 THRAP3Q9Y2W1 955 aaKnown RBP10.22□□□□□ -0.77
SND1-211ENST00000484767 FAM205AQ6ZU69 1335 aa10.22□□□□□ -0.77
SND1-211ENST00000484767 FOCADQ5VW36 1801 aa10.21□□□□□ -0.77
SND1-211ENST00000484767 MYH7BA7E2Y1 1941 aa10.21□□□□□ -0.77
SND1-211ENST00000484767 GRID2IPA4D2P6 1211 aa10.21□□□□□ -0.77
SND1-211ENST00000484767 PALM3A6NDB9 673 aaPredicted RBP10.21□□□□□ -0.77
SND1-211ENST00000484767 GOLGA6BA6NDN3 693 aa10.21□□□□□ -0.77
SND1-211ENST00000484767 RASSF10A6NK89 507 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms