RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 ABT1Q9ULW3 272 aaKnown RBP23.33■■□□□ 1.33
VCPKMT-203ENST00000484763 SPDYE3A6NKU9 549 aa23.33■■□□□ 1.32
VCPKMT-203ENST00000484763 BTBD19C9JJ37 291 aa23.33■■□□□ 1.32
VCPKMT-203ENST00000484763 SPTLC2O15270 562 aa23.33■■□□□ 1.32
VCPKMT-203ENST00000484763 STAT3P40763 770 aa23.33■■□□□ 1.32
VCPKMT-203ENST00000484763 PTPAQ15257 358 aa23.33■■□□□ 1.32
VCPKMT-203ENST00000484763 TKFCQ3LXA3 575 aa23.33■■□□□ 1.32
VCPKMT-203ENST00000484763 NEK8Q86SG6 692 aa23.33■■□□□ 1.32
VCPKMT-203ENST00000484763 ANO3Q9BYT9 981 aa23.33■■□□□ 1.32
VCPKMT-203ENST00000484763 MYH7BA7E2Y1 1941 aa23.33■■□□□ 1.32
VCPKMT-203ENST00000484763 PDHXO00330 501 aa23.32■■□□□ 1.32
VCPKMT-203ENST00000484763 NFIBO00712 420 aa23.32■■□□□ 1.32
VCPKMT-203ENST00000484763 WNT7AO00755 349 aa23.32■■□□□ 1.32
VCPKMT-203ENST00000484763 BMP15O95972 392 aa23.32■■□□□ 1.32
VCPKMT-203ENST00000484763 SLC10A3P09131 477 aa23.32■■□□□ 1.32
VCPKMT-203ENST00000484763 HOXA13P31271 388 aaPredicted RBP23.32■■□□□ 1.32
VCPKMT-203ENST00000484763 PLS1Q14651 629 aa23.32■■□□□ 1.32
VCPKMT-203ENST00000484763 MUM1L1Q5H9M0 696 aa23.32■■□□□ 1.32
VCPKMT-203ENST00000484763 SAMD3Q8N6K7 520 aa23.32■■□□□ 1.32
VCPKMT-203ENST00000484763 GTF3C2Q8WUA4 911 aaPredicted RBP23.32■■□□□ 1.32
VCPKMT-203ENST00000484763 RNF146Q9NTX7 359 aa23.32■■□□□ 1.32
VCPKMT-203ENST00000484763 GHRHRQ02643 423 aa23.31■■□□□ 1.32
VCPKMT-203ENST00000484763 POTEEQ6S8J3 1075 aa23.31■■□□□ 1.32
VCPKMT-203ENST00000484763 HHIPL1Q96JK4 782 aa23.31■■□□□ 1.32
VCPKMT-203ENST00000484763 BTBD7Q9P203 1132 aa23.31■■□□□ 1.32
VCPKMT-203ENST00000484763 RIPK3Q9Y572 518 aa23.31■■□□□ 1.32
VCPKMT-203ENST00000484763 TESPA1A2RU30 521 aaPredicted RBP23.31■■□□□ 1.32
VCPKMT-203ENST00000484763 HSD17B4P51659 736 aa23.31■■□□□ 1.32
VCPKMT-203ENST00000484763 UBE2HP62256 183 aa23.31■■□□□ 1.32
VCPKMT-203ENST00000484763 JMYQ8N9B5 988 aa23.31■■□□□ 1.32
VCPKMT-203ENST00000484763 TBC1D5Q92609 795 aa23.31■■□□□ 1.32
VCPKMT-203ENST00000484763 MAP3K20Q9NYL2 800 aaKnown RBP23.31■■□□□ 1.32
VCPKMT-203ENST00000484763 MANSC4A6NHS7 340 aaPredicted RBP23.3■■□□□ 1.32
VCPKMT-203ENST00000484763 PPP6R2O75170 966 aa23.3■■□□□ 1.32
VCPKMT-203ENST00000484763 GADD45BO75293 160 aaPredicted RBP23.3■■□□□ 1.32
VCPKMT-203ENST00000484763 ME1P48163 572 aa23.3■■□□□ 1.32
VCPKMT-203ENST00000484763 ZNF174Q15697 407 aa23.3■■□□□ 1.32
VCPKMT-203ENST00000484763 LETM2Q2VYF4 491 aa23.3■■□□□ 1.32
VCPKMT-203ENST00000484763 PAGR1Q9BTK6 254 aa23.3■■□□□ 1.32
VCPKMT-203ENST00000484763 MORC2Q9Y6X9 1032 aaPredicted RBP23.3■■□□□ 1.32
VCPKMT-203ENST00000484763 GOLGA6L4A6NEF3 574 aa23.29■■□□□ 1.32
VCPKMT-203ENST00000484763 CCDC102AQ96A19 550 aa23.29■■□□□ 1.32
VCPKMT-203ENST00000484763 SPATC1LQ9H0A9 340 aa23.29■■□□□ 1.32
VCPKMT-203ENST00000484763 ACAD9Q9H845 621 aa23.29■■□□□ 1.32
VCPKMT-203ENST00000484763 RABGAP1Q9Y3P9 1069 aa23.29■■□□□ 1.32
VCPKMT-203ENST00000484763 CNMDO75829 334 aa23.29■■□□□ 1.32
VCPKMT-203ENST00000484763 CYP2C8P10632 490 aa23.29■■□□□ 1.32
VCPKMT-203ENST00000484763 MCM7P33993 719 aa23.29■■□□□ 1.32
VCPKMT-203ENST00000484763 ORC2Q13416 577 aaPredicted RBP23.29■■□□□ 1.32
VCPKMT-203ENST00000484763 FCHSD1Q86WN1 690 aa23.29■■□□□ 1.32
VCPKMT-203ENST00000484763 RIOX2Q8IUF8 465 aa23.29■■□□□ 1.32
VCPKMT-203ENST00000484763 FAM43AQ8N2R8 423 aa23.29■■□□□ 1.32
VCPKMT-203ENST00000484763 SMCR8Q8TEV9 937 aaPredicted RBP23.29■■□□□ 1.32
VCPKMT-203ENST00000484763 EHMT1Q9H9B1 1298 aa23.29■■□□□ 1.32
VCPKMT-203ENST00000484763 CCNT1O60563 726 aaKnown RBP23.28■■□□□ 1.32
VCPKMT-203ENST00000484763 SKOR2Q2VWA4 1001 aaPredicted RBP23.28■■□□□ 1.32
VCPKMT-203ENST00000484763 CHST13Q8NET6 341 aa23.28■■□□□ 1.32
VCPKMT-203ENST00000484763 PTPN18Q99952 460 aa23.28■■□□□ 1.32
VCPKMT-203ENST00000484763 MAF1Q9H063 256 aa23.28■■□□□ 1.32
VCPKMT-203ENST00000484763 PCDHA7Q9UN72 937 aa23.28■■□□□ 1.32
VCPKMT-203ENST00000484763 MBD3O95983 291 aa23.27■■□□□ 1.32
VCPKMT-203ENST00000484763 MARCKSP29966 332 aaPredicted RBP23.27■■□□□ 1.32
VCPKMT-203ENST00000484763 SREBF1P36956 1147 aa23.27■■□□□ 1.32
VCPKMT-203ENST00000484763 RNF207Q6ZRF8 634 aa23.27■■□□□ 1.32
VCPKMT-203ENST00000484763 PARK7Q99497 189 aaKnown RBP23.27■■□□□ 1.32
VCPKMT-203ENST00000484763 NAP1L4Q99733 375 aaKnown RBP23.27■■□□□ 1.32
VCPKMT-203ENST00000484763 RBPJLQ9UBG7 517 aa23.27■■□□□ 1.32
VCPKMT-203ENST00000484763 DDX49Q9Y6V7 483 aaKnown RBP23.27■■□□□ 1.32
VCPKMT-203ENST00000484763 FAM155AB1AL88 458 aaPredicted RBP23.26■■□□□ 1.31
VCPKMT-203ENST00000484763 COPB2P35606 906 aa23.26■■□□□ 1.31
VCPKMT-203ENST00000484763 USP11P51784 963 aa23.26■■□□□ 1.31
VCPKMT-203ENST00000484763 ATP2C1P98194 919 aaPredicted RBP23.26■■□□□ 1.31
VCPKMT-203ENST00000484763 NSMFQ6X4W1 530 aa23.26■■□□□ 1.31
VCPKMT-203ENST00000484763 TXNRD2Q9NNW7 524 aa23.26■■□□□ 1.31
VCPKMT-203ENST00000484763 FBXO40Q9UH90 709 aa23.26■■□□□ 1.31
VCPKMT-203ENST00000484763 PEX10O60683 326 aa23.26■■□□□ 1.31
VCPKMT-203ENST00000484763 RPS6P62753 249 aaKnown RBP23.26■■□□□ 1.31
VCPKMT-203ENST00000484763 ARHGAP4P98171 946 aa23.26■■□□□ 1.31
VCPKMT-203ENST00000484763 PTGDRQ13258 359 aa23.26■■□□□ 1.31
VCPKMT-203ENST00000484763 CRYGNQ8WXF5 182 aa23.26■■□□□ 1.31
VCPKMT-203ENST00000484763 ZCCHC17Q9NP64 241 aaKnown RBP23.26■■□□□ 1.31
VCPKMT-203ENST00000484763 TRAK2O60296 914 aa23.25■■□□□ 1.31
VCPKMT-203ENST00000484763 SLC25A27O95847 323 aa23.25■■□□□ 1.31
VCPKMT-203ENST00000484763 GCFC2P16383 781 aaKnown RBP23.25■■□□□ 1.31
VCPKMT-203ENST00000484763 TPRNQ4KMQ1 711 aa23.25■■□□□ 1.31
VCPKMT-203ENST00000484763 ADALQ6DHV7 355 aa23.25■■□□□ 1.31
VCPKMT-203ENST00000484763 PPP4R3AQ6IN85 833 aa23.25■■□□□ 1.31
VCPKMT-203ENST00000484763 KRI1Q8N9T8 703 aaKnown RBP23.25■■□□□ 1.31
VCPKMT-203ENST00000484763 SYTL5Q8TDW5 730 aaPredicted RBP23.25■■□□□ 1.31
VCPKMT-203ENST00000484763 MOV10L1Q9BXT6 1211 aaKnown RBP23.25■■□□□ 1.31
VCPKMT-203ENST00000484763 LAD1O00515 517 aa23.24■■□□□ 1.31
VCPKMT-203ENST00000484763 EDIL3O43854 480 aa23.24■■□□□ 1.31
VCPKMT-203ENST00000484763 NEMFO60524 1076 aa23.24■■□□□ 1.31
VCPKMT-203ENST00000484763 GCLCP48506 637 aaPredicted RBP23.24■■□□□ 1.31
VCPKMT-203ENST00000484763 INHBEP58166 350 aa23.24■■□□□ 1.31
VCPKMT-203ENST00000484763 KLHL40Q2TBA0 621 aa23.24■■□□□ 1.31
VCPKMT-203ENST00000484763 SLC30A10Q6XR72 485 aa23.24■■□□□ 1.31
VCPKMT-203ENST00000484763 GPT2Q8TD30 523 aa23.24■■□□□ 1.31
VCPKMT-203ENST00000484763 COL20A1Q9P218 1284 aa23.24■■□□□ 1.31
VCPKMT-203ENST00000484763 TDP2O95551 362 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms