RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 KRTAP4-5Q9BYR2 181 aa7.6□□□□□ -1.19
SCAF11-207ENST00000484275 ADAM7Q9H2U9 754 aa7.6□□□□□ -1.19
SCAF11-207ENST00000484275 BCAS3Q9H6U6 928 aa7.6□□□□□ -1.19
SCAF11-207ENST00000484275 CGGBP1Q9UFW8 167 aaPredicted RBP7.6□□□□□ -1.19
SCAF11-207ENST00000484275 SLC12A7Q9Y666 1083 aa7.6□□□□□ -1.19
SCAF11-207ENST00000484275 SYN1P17600 705 aa7.59□□□□□ -1.19
SCAF11-207ENST00000484275 PFKLP17858 780 aa7.59□□□□□ -1.19
SCAF11-207ENST00000484275 FOXO4P98177 505 aa7.59□□□□□ -1.19
SCAF11-207ENST00000484275 HDLBPQ00341 1268 aaKnown RBP7.59□□□□□ -1.19
SCAF11-207ENST00000484275 CAP1Q01518 475 aa7.59□□□□□ -1.19
SCAF11-207ENST00000484275 SKOR2Q2VWA4 1001 aaPredicted RBP7.59□□□□□ -1.19
SCAF11-207ENST00000484275 EEF1DP3Q658K8 133 aa7.59□□□□□ -1.19
SCAF11-207ENST00000484275 NT5DC4Q86YG4 428 aa7.59□□□□□ -1.19
SCAF11-207ENST00000484275 SP8Q8IXZ3 490 aa7.59□□□□□ -1.19
SCAF11-207ENST00000484275 RWDD3Q9Y3V2 267 aa7.59□□□□□ -1.19
SCAF11-207ENST00000484275 A0A1B0GTL3 188 aa7.58□□□□□ -1.2
SCAF11-207ENST00000484275 GJA8P48165 433 aa7.58□□□□□ -1.2
SCAF11-207ENST00000484275 NASPP49321 788 aaPredicted RBP7.58□□□□□ -1.2
SCAF11-207ENST00000484275 KRTAP10-2P60368 255 aa7.58□□□□□ -1.2
SCAF11-207ENST00000484275 HTRA3P83110 453 aa7.58□□□□□ -1.2
SCAF11-207ENST00000484275 TARBP2Q15633 366 aaKnown RBP7.58□□□□□ -1.2
SCAF11-207ENST00000484275 ADAT2Q7Z6V5 191 aaKnown RBP7.58□□□□□ -1.2
SCAF11-207ENST00000484275 CPNE8Q86YQ8 564 aa7.58□□□□□ -1.2
SCAF11-207ENST00000484275 ARHGEF39Q8N4T4 335 aa7.58□□□□□ -1.2
SCAF11-207ENST00000484275 FAM169BQ8N8A8 192 aa7.58□□□□□ -1.2
SCAF11-207ENST00000484275 FNIP1Q8TF40 1166 aa7.58□□□□□ -1.2
SCAF11-207ENST00000484275 SPATA32Q96LK8 384 aa7.58□□□□□ -1.2
SCAF11-207ENST00000484275 GBP3Q9H0R5 595 aa7.58□□□□□ -1.2
SCAF11-207ENST00000484275 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.58□□□□□ -1.2
SCAF11-207ENST00000484275 ASGR2P07307 311 aa7.57□□□□□ -1.2
SCAF11-207ENST00000484275 SLURP1P55000 103 aa7.57□□□□□ -1.2
SCAF11-207ENST00000484275 DLX2Q07687 328 aaPredicted RBP7.57□□□□□ -1.2
SCAF11-207ENST00000484275 RGS22Q8NE09 1264 aa7.57□□□□□ -1.2
SCAF11-207ENST00000484275 OR6P1Q8NGX9 317 aa7.57□□□□□ -1.2
SCAF11-207ENST00000484275 MTA3Q9BTC8 594 aa7.57□□□□□ -1.2
SCAF11-207ENST00000484275 C2orf71A6NGG8 1288 aa7.56□□□□□ -1.2
SCAF11-207ENST00000484275 PPM1BO75688 479 aa7.56□□□□□ -1.2
SCAF11-207ENST00000484275 PPP2R5EQ16537 467 aa7.56□□□□□ -1.2
SCAF11-207ENST00000484275 ZNF526Q8TF50 670 aaPredicted RBP7.56□□□□□ -1.2
SCAF11-207ENST00000484275 RCC1LQ96I51 464 aaKnown RBP7.56□□□□□ -1.2
SCAF11-207ENST00000484275 RNF38Q9H0F5 515 aa7.56□□□□□ -1.2
SCAF11-207ENST00000484275 GULP1Q9UBP9 304 aa7.56□□□□□ -1.2
SCAF11-207ENST00000484275 APEX2Q9UBZ4 518 aa7.56□□□□□ -1.2
SCAF11-207ENST00000484275 DBR1Q9UK59 544 aaKnown RBP7.56□□□□□ -1.2
SCAF11-207ENST00000484275 BACE2Q9Y5Z0 518 aa7.56□□□□□ -1.2
SCAF11-207ENST00000484275 PMLP29590 882 aa7.55□□□□□ -1.2
SCAF11-207ENST00000484275 SEPHS1P49903 392 aa7.55□□□□□ -1.2
SCAF11-207ENST00000484275 CASP7P55210 303 aa7.55□□□□□ -1.2
SCAF11-207ENST00000484275 AMPD2Q01433 879 aa7.55□□□□□ -1.2
SCAF11-207ENST00000484275 SAPCD2Q86UD0 394 aa7.55□□□□□ -1.2
SCAF11-207ENST00000484275 NLGN1Q8N2Q7 840 aa7.55□□□□□ -1.2
SCAF11-207ENST00000484275 LZTR1Q8N653 840 aa7.55□□□□□ -1.2
SCAF11-207ENST00000484275 ALG3Q92685 438 aa7.55□□□□□ -1.2
SCAF11-207ENST00000484275 TSPAN17Q96FV3 270 aa7.55□□□□□ -1.2
SCAF11-207ENST00000484275 PMF1-BGLAPU3KQ54 211 aa7.55□□□□□ -1.2
SCAF11-207ENST00000484275 PRICKLE3O43900 615 aaPredicted RBP7.54□□□□□ -1.2
SCAF11-207ENST00000484275 NCAM1P13591 858 aa7.54□□□□□ -1.2
SCAF11-207ENST00000484275 GRB10Q13322 594 aa7.54□□□□□ -1.2
SCAF11-207ENST00000484275 MBLAC2Q68D91 279 aa7.54□□□□□ -1.2
SCAF11-207ENST00000484275 KIAA1211LQ6NV74 962 aa7.54□□□□□ -1.2
SCAF11-207ENST00000484275 LIPIQ6XZB0 460 aa7.54□□□□□ -1.2
SCAF11-207ENST00000484275 FRMD5Q7Z6J6 570 aa7.54□□□□□ -1.2
SCAF11-207ENST00000484275 MRRFQ96E11 262 aaKnown RBP7.54□□□□□ -1.2
SCAF11-207ENST00000484275 TEPSINQ96N21 525 aa7.54□□□□□ -1.2
SCAF11-207ENST00000484275 KIAA1522Q9P206 1035 aaPredicted RBP7.54□□□□□ -1.2
SCAF11-207ENST00000484275 C7orf72A4D263 438 aa7.53□□□□□ -1.2
SCAF11-207ENST00000484275 KCNC1P48547 511 aa7.53□□□□□ -1.2
SCAF11-207ENST00000484275 B3GNT8Q7Z7M8 397 aa7.53□□□□□ -1.2
SCAF11-207ENST00000484275 NOX5Q96PH1 765 aa7.53□□□□□ -1.2
SCAF11-207ENST00000484275 SPATA25Q9BR10 227 aa7.53□□□□□ -1.2
SCAF11-207ENST00000484275 SUGT1Q9Y2Z0 365 aa7.53□□□□□ -1.2
SCAF11-207ENST00000484275 NPHP3-ACAD11A0A0J9YXS1 232 aa7.52□□□□□ -1.21
SCAF11-207ENST00000484275 PAMP19021 973 aa7.52□□□□□ -1.21
SCAF11-207ENST00000484275 VHLLQ6RSH7 139 aa7.52□□□□□ -1.21
SCAF11-207ENST00000484275 COPS5Q92905 334 aa7.52□□□□□ -1.21
SCAF11-207ENST00000484275 LGR4Q9BXB1 951 aa7.52□□□□□ -1.21
SCAF11-207ENST00000484275 ACBD3Q9H3P7 528 aa7.52□□□□□ -1.21
SCAF11-207ENST00000484275 GPRC5CQ9NQ84 441 aa7.52□□□□□ -1.21
SCAF11-207ENST00000484275 AKT3Q9Y243 479 aa7.52□□□□□ -1.21
SCAF11-207ENST00000484275 FAN1Q9Y2M0 1017 aa7.52□□□□□ -1.21
SCAF11-207ENST00000484275 SIT1Q9Y3P8 196 aa7.52□□□□□ -1.21
SCAF11-207ENST00000484275 SH3D21A4FU49 640 aa7.51□□□□□ -1.21
SCAF11-207ENST00000484275 ANKRD34BA5PLL1 514 aa7.51□□□□□ -1.21
SCAF11-207ENST00000484275 UNCXA6NJT0 531 aa7.51□□□□□ -1.21
SCAF11-207ENST00000484275 KCNH1O95259 989 aa7.51□□□□□ -1.21
SCAF11-207ENST00000484275 CELA3BP08861 270 aa7.51□□□□□ -1.21
SCAF11-207ENST00000484275 NFKB2Q00653 900 aa7.51□□□□□ -1.21
SCAF11-207ENST00000484275 RTP5Q14D33 572 aa7.51□□□□□ -1.21
SCAF11-207ENST00000484275 CABP7Q86V35 215 aa7.51□□□□□ -1.21
SCAF11-207ENST00000484275 NETO2Q8NC67 525 aa7.51□□□□□ -1.21
SCAF11-207ENST00000484275 DPF3Q92784 378 aa7.51□□□□□ -1.21
SCAF11-207ENST00000484275 CLEC1BQ9P126 229 aa7.51□□□□□ -1.21
SCAF11-207ENST00000484275 JAG2Q9Y219 1238 aa7.51□□□□□ -1.21
SCAF11-207ENST00000484275 EMC9Q9Y3B6 208 aa7.51□□□□□ -1.21
SCAF11-207ENST00000484275 CYP4F3Q08477 520 aa7.5□□□□□ -1.21
SCAF11-207ENST00000484275 WWC2Q6AWC2 1192 aa7.5□□□□□ -1.21
SCAF11-207ENST00000484275 SMARCC2Q8TAQ2 1214 aa7.5□□□□□ -1.21
SCAF11-207ENST00000484275 CPLX3Q8WVH0 158 aa7.5□□□□□ -1.21
SCAF11-207ENST00000484275 PEX11GQ96HA9 241 aa7.5□□□□□ -1.21
SCAF11-207ENST00000484275 SEC16BQ96JE7 1060 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms