RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 SDR42E1Q8WUS8 393 aa7.35□□□□□ -1.23
PTCD3-215ENST00000484203 STRBPQ96SI9 672 aaKnown RBP7.35□□□□□ -1.23
PTCD3-215ENST00000484203 RWDD1Q9H446 243 aaPredicted RBP7.35□□□□□ -1.23
PTCD3-215ENST00000484203 DNAAF2Q9NVR5 837 aaKnown RBP7.35□□□□□ -1.23
PTCD3-215ENST00000484203 IVNS1ABPQ9Y6Y0 642 aa7.35□□□□□ -1.23
PTCD3-215ENST00000484203 SMARCA5O60264 1052 aaPredicted RBP7.34□□□□□ -1.23
PTCD3-215ENST00000484203 SGPL1O95470 568 aa7.34□□□□□ -1.23
PTCD3-215ENST00000484203 APPP05067 770 aa7.34□□□□□ -1.23
PTCD3-215ENST00000484203 INHAP05111 366 aa7.34□□□□□ -1.23
PTCD3-215ENST00000484203 CTGFP29279 349 aa7.34□□□□□ -1.23
PTCD3-215ENST00000484203 GPC1P35052 558 aa7.34□□□□□ -1.23
PTCD3-215ENST00000484203 CDK8P49336 464 aa7.34□□□□□ -1.23
PTCD3-215ENST00000484203 NT5C2P49902 561 aa7.34□□□□□ -1.23
PTCD3-215ENST00000484203 CLDN10P78369 228 aa7.34□□□□□ -1.23
PTCD3-215ENST00000484203 CAP1Q01518 475 aa7.34□□□□□ -1.23
PTCD3-215ENST00000484203 CENPCQ03188 943 aa7.34□□□□□ -1.23
PTCD3-215ENST00000484203 ICA1Q05084 483 aa7.34□□□□□ -1.23
PTCD3-215ENST00000484203 SEPT2Q15019 361 aa7.34□□□□□ -1.23
PTCD3-215ENST00000484203 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.34□□□□□ -1.231e-6■■■■□ 25.2
PTCD3-215ENST00000484203 CTR9Q6PD62 1173 aa7.34□□□□□ -1.23
PTCD3-215ENST00000484203 LYSMD3Q7Z3D4 306 aa7.34□□□□□ -1.23
PTCD3-215ENST00000484203 PRICKLE2Q7Z3G6 844 aa7.34□□□□□ -1.23
PTCD3-215ENST00000484203 PLEKHH3Q7Z736 793 aa7.34□□□□□ -1.23
PTCD3-215ENST00000484203 U2AF1L4Q8WU68 220 aaKnown RBP7.34□□□□□ -1.23
PTCD3-215ENST00000484203 EVI5LQ96CN4 794 aa7.34□□□□□ -1.23
PTCD3-215ENST00000484203 EDC3Q96F86 508 aaKnown RBP7.34□□□□□ -1.23
PTCD3-215ENST00000484203 PUS7LQ9H0K6 701 aaKnown RBP7.34□□□□□ -1.23
PTCD3-215ENST00000484203 RPAP3Q9H6T3 665 aaPredicted RBP7.34□□□□□ -1.23
PTCD3-215ENST00000484203 MKNK2Q9HBH9 465 aa7.34□□□□□ -1.23
PTCD3-215ENST00000484203 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.34□□□□□ -1.23
PTCD3-215ENST00000484203 RBPJLQ9UBG7 517 aa7.34□□□□□ -1.23
PTCD3-215ENST00000484203 SERTAD1Q9UHV2 236 aa7.34□□□□□ -1.23
PTCD3-215ENST00000484203 GJD2Q9UKL4 321 aa7.34□□□□□ -1.23
PTCD3-215ENST00000484203 TMX2Q9Y320 296 aa7.34□□□□□ -1.23
PTCD3-215ENST00000484203 NR2E3Q9Y5X4 410 aa7.34□□□□□ -1.23
PTCD3-215ENST00000484203 RPTORQ8N122 1335 aa7.33□□□□□ -1.24
PTCD3-215ENST00000484203 SLC15A5A6NIM6 579 aa7.33□□□□□ -1.24
PTCD3-215ENST00000484203 TMEM229AB2RXF0 380 aa7.33□□□□□ -1.24
PTCD3-215ENST00000484203 PATL2C9JE40 543 aaKnown RBP7.33□□□□□ -1.24
PTCD3-215ENST00000484203 WDR46O15213 610 aaKnown RBP7.33□□□□□ -1.24
PTCD3-215ENST00000484203 PRKAB2O43741 272 aa7.33□□□□□ -1.24
PTCD3-215ENST00000484203 MSCO60682 206 aa7.33□□□□□ -1.24
PTCD3-215ENST00000484203 TFRCP02786 760 aaKnown RBP7.33□□□□□ -1.24
PTCD3-215ENST00000484203 ZKSCAN1P17029 563 aaPredicted RBP7.33□□□□□ -1.24
PTCD3-215ENST00000484203 TDO2P48775 406 aa7.33□□□□□ -1.24
PTCD3-215ENST00000484203 MFAP1P55081 439 aaKnown RBP7.33□□□□□ -1.24
PTCD3-215ENST00000484203 JAG1P78504 1218 aa7.33□□□□□ -1.24
PTCD3-215ENST00000484203 PDE4BQ07343 736 aa7.33□□□□□ -1.24
PTCD3-215ENST00000484203 ANKRD45Q5TZF3 282 aa7.33□□□□□ -1.24
PTCD3-215ENST00000484203 MFSD14CQ5VZR4 134 aa7.33□□□□□ -1.24
PTCD3-215ENST00000484203 GPR142Q7Z601 462 aa7.33□□□□□ -1.24
PTCD3-215ENST00000484203 NPAS3Q8IXF0 933 aa7.33□□□□□ -1.24
PTCD3-215ENST00000484203 ZNF444Q8N0Y2 327 aaPredicted RBP7.33□□□□□ -1.24
PTCD3-215ENST00000484203 ABRAQ8N0Z2 381 aa7.33□□□□□ -1.24
PTCD3-215ENST00000484203 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.33□□□□□ -1.24
PTCD3-215ENST00000484203 SHCBP1Q8NEM2 672 aa7.33□□□□□ -1.24
PTCD3-215ENST00000484203 ACER1Q8TDN7 264 aa7.33□□□□□ -1.24
PTCD3-215ENST00000484203 APBA2Q99767 749 aa7.33□□□□□ -1.24
PTCD3-215ENST00000484203 PAGR1Q9BTK6 254 aa7.33□□□□□ -1.24
PTCD3-215ENST00000484203 FSD1Q9BTV5 496 aa7.33□□□□□ -1.24
PTCD3-215ENST00000484203 TANGO6Q9C0B7 1094 aa7.33□□□□□ -1.24
PTCD3-215ENST00000484203 MROH8Q9H579 483 aa7.33□□□□□ -1.24
PTCD3-215ENST00000484203 VCPKMTQ9H867 229 aa7.33□□□□□ -1.24
PTCD3-215ENST00000484203 PAK6Q9NQU5 681 aaPredicted RBP7.33□□□□□ -1.24
PTCD3-215ENST00000484203 NXF1Q9UBU9 619 aaKnown RBP7.33□□□□□ -1.24
PTCD3-215ENST00000484203 STAP2Q9UGK3 403 aa7.33□□□□□ -1.24
PTCD3-215ENST00000484203 GABRQQ9UN88 632 aa7.33□□□□□ -1.24
PTCD3-215ENST00000484203 KIAA1024Q9UPX6 916 aa7.33□□□□□ -1.24
PTCD3-215ENST00000484203 RBM19Q9Y4C8 960 aaKnown RBP7.33□□□□□ -1.24
PTCD3-215ENST00000484203 MYH2Q9UKX2 1941 aa7.33□□□□□ -1.24
PTCD3-215ENST00000484203 GSG1L2A8MUP6 293 aa7.32□□□□□ -1.24
PTCD3-215ENST00000484203 GPAA1O43292 621 aa7.32□□□□□ -1.24
PTCD3-215ENST00000484203 FLOT1O75955 427 aa7.32□□□□□ -1.24
PTCD3-215ENST00000484203 FARP2O94887 1054 aaPredicted RBP7.32□□□□□ -1.24
PTCD3-215ENST00000484203 SLC25A27O95847 323 aa7.32□□□□□ -1.24
PTCD3-215ENST00000484203 HOXC6P09630 235 aa7.32□□□□□ -1.24
PTCD3-215ENST00000484203 ELNP15502 786 aa7.32□□□□□ -1.24
PTCD3-215ENST00000484203 GUCY1A2P33402 732 aa7.32□□□□□ -1.24
PTCD3-215ENST00000484203 MTFR1Q15390 333 aa7.32□□□□□ -1.24
PTCD3-215ENST00000484203 TLR1Q15399 786 aa7.32□□□□□ -1.24
PTCD3-215ENST00000484203 ZYXQ15942 572 aaKnown RBP7.32□□□□□ -1.24
PTCD3-215ENST00000484203 TPCN2Q8NHX9 752 aa7.32□□□□□ -1.24
PTCD3-215ENST00000484203 OSBP2Q969R2 916 aa7.32□□□□□ -1.24
PTCD3-215ENST00000484203 ZSCAN10Q96SZ4 725 aaPredicted RBP7.32□□□□□ -1.24
PTCD3-215ENST00000484203 NAPBQ9H115 298 aa7.32□□□□□ -1.24
PTCD3-215ENST00000484203 TXNRD2Q9NNW7 524 aa7.32□□□□□ -1.24
PTCD3-215ENST00000484203 NYAP2Q9P242 653 aa7.32□□□□□ -1.24
PTCD3-215ENST00000484203 STK17AQ9UEE5 414 aa7.32□□□□□ -1.24
PTCD3-215ENST00000484203 LAMB1P07942 1786 aa7.32□□□□□ -1.24
PTCD3-215ENST00000484203 CEP290O15078 2479 aa7.32□□□□□ -1.24
PTCD3-215ENST00000484203 OTOFQ9HC10 1997 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 A0A1W2PRG0 241 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 HIP1O00291 1037 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 BACH1O14867 736 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 CYP2D6P10635 497 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 PCP11498 1178 aaKnown RBP7.31□□□□□ -1.24
PTCD3-215ENST00000484203 AKR1B1P15121 316 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 CENPFP49454 3210 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 ATP2B2Q01814 1243 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 ZMYM1Q5SVZ6 1142 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms