RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 BMP15O95972 392 aa15.98■□□□□ 0.15
SMAD9-204ENST00000483941 ICAM1P05362 532 aa15.98■□□□□ 0.15
SMAD9-204ENST00000483941 MYSM1Q5VVJ2 828 aa15.98■□□□□ 0.15
SMAD9-204ENST00000483941 REXO1Q8N1G1 1221 aaKnown RBP15.98■□□□□ 0.15
SMAD9-204ENST00000483941 MB21D1Q8N884 522 aa15.98■□□□□ 0.15
SMAD9-204ENST00000483941 GTF3C2Q8WUA4 911 aaPredicted RBP15.98■□□□□ 0.15
SMAD9-204ENST00000483941 HTATIP2Q9BUP3 242 aa15.98■□□□□ 0.15
SMAD9-204ENST00000483941 RIC8AQ9NPQ8 531 aa15.98■□□□□ 0.15
SMAD9-204ENST00000483941 PNMA3Q9UL41 463 aa15.98■□□□□ 0.15
SMAD9-204ENST00000483941 FOSP01100 380 aaPredicted RBP15.97■□□□□ 0.15
SMAD9-204ENST00000483941 OSBPP22059 807 aa15.97■□□□□ 0.15
SMAD9-204ENST00000483941 DSG3P32926 999 aa15.97■□□□□ 0.15
SMAD9-204ENST00000483941 DNM1Q05193 864 aaKnown RBP15.97■□□□□ 0.15
SMAD9-204ENST00000483941 NFKBIBQ15653 356 aa15.97■□□□□ 0.15
SMAD9-204ENST00000483941 GADL1Q6ZQY3 521 aa15.97■□□□□ 0.15
SMAD9-204ENST00000483941 MCF2L2Q86YR7 1114 aa15.97■□□□□ 0.15
SMAD9-204ENST00000483941 COA7Q96BR5 231 aa15.97■□□□□ 0.15
SMAD9-204ENST00000483941 PRO3102Q9H379 93 aa15.97■□□□□ 0.15
SMAD9-204ENST00000483941 SLC38A10Q9HBR0 1119 aa15.97■□□□□ 0.15
SMAD9-204ENST00000483941 GJB4Q9NTQ9 266 aa15.97■□□□□ 0.15
SMAD9-204ENST00000483941 MAP3K20Q9NYL2 800 aaKnown RBP15.97■□□□□ 0.15
SMAD9-204ENST00000483941 AGTPBP1Q9UPW5 1226 aa15.97■□□□□ 0.15
SMAD9-204ENST00000483941 SLC45A1Q9Y2W3 748 aa15.97■□□□□ 0.15
SMAD9-204ENST00000483941 UNC80Q8N2C7 3258 aa15.97■□□□□ 0.15
SMAD9-204ENST00000483941 MYH6P13533 1939 aa15.96■□□□□ 0.15
SMAD9-204ENST00000483941 ECM2O94769 699 aaPredicted RBP15.96■□□□□ 0.15
SMAD9-204ENST00000483941 IRX3P78415 501 aaPredicted RBP15.96■□□□□ 0.15
SMAD9-204ENST00000483941 SKOR2Q2VWA4 1001 aaPredicted RBP15.96■□□□□ 0.15
SMAD9-204ENST00000483941 TKFCQ3LXA3 575 aa15.96■□□□□ 0.15
SMAD9-204ENST00000483941 UBE2Q1Q7Z7E8 422 aa15.96■□□□□ 0.15
SMAD9-204ENST00000483941 TMEM87AQ8NBN3 555 aa15.96■□□□□ 0.15
SMAD9-204ENST00000483941 NAP1L4Q99733 375 aaKnown RBP15.96■□□□□ 0.15
SMAD9-204ENST00000483941 POLR3EQ9NVU0 708 aa15.96■□□□□ 0.15
SMAD9-204ENST00000483941 RTEL1Q9NZ71 1219 aa15.96■□□□□ 0.15
SMAD9-204ENST00000483941 SRRDQ9UH36 339 aa15.96■□□□□ 0.15
SMAD9-204ENST00000483941 ELP1O95163 1332 aa15.95■□□□□ 0.14
SMAD9-204ENST00000483941 BAZ2BQ9UIF8 2168 aaKnown RBP15.95■□□□□ 0.14
SMAD9-204ENST00000483941 GOLGA6L4A6NEF3 574 aa15.95■□□□□ 0.14
SMAD9-204ENST00000483941 VWA5AO00534 786 aa15.95■□□□□ 0.14
SMAD9-204ENST00000483941 ATP2A1O14983 1001 aa15.95■□□□□ 0.14
SMAD9-204ENST00000483941 YEATS4O95619 227 aa15.95■□□□□ 0.14
SMAD9-204ENST00000483941 GJA8P48165 433 aa15.95■□□□□ 0.14
SMAD9-204ENST00000483941 AP3B2Q13367 1082 aa15.95■□□□□ 0.14
SMAD9-204ENST00000483941 ORC2Q13416 577 aaPredicted RBP15.95■□□□□ 0.14
SMAD9-204ENST00000483941 NONOQ15233 471 aaKnown RBP eCLIP15.95■□□□□ 0.14
SMAD9-204ENST00000483941 SF3A1Q15459 793 aaKnown RBP15.95■□□□□ 0.14
SMAD9-204ENST00000483941 CCDC174Q6PII3 467 aa15.95■□□□□ 0.14
SMAD9-204ENST00000483941 RAET1EQ8TD07 263 aa15.95■□□□□ 0.14
SMAD9-204ENST00000483941 KCNG4Q8TDN1 519 aa15.95■□□□□ 0.14
SMAD9-204ENST00000483941 TRIM47Q96LD4 638 aa15.95■□□□□ 0.14
SMAD9-204ENST00000483941 SPATA32Q96LK8 384 aa15.95■□□□□ 0.14
SMAD9-204ENST00000483941 EHMT1Q9H9B1 1298 aa15.95■□□□□ 0.14
SMAD9-204ENST00000483941 FBXO28Q9NVF7 368 aa15.95■□□□□ 0.14
SMAD9-204ENST00000483941 CCPG1Q9ULG6 757 aa15.95■□□□□ 0.14
SMAD9-204ENST00000483941 ADAMTS5Q9UNA0 930 aa15.95■□□□□ 0.14
SMAD9-204ENST00000483941 NR2E3Q9Y5X4 410 aa15.95■□□□□ 0.14
SMAD9-204ENST00000483941 KIF28PB7ZC32 967 aa15.94■□□□□ 0.14
SMAD9-204ENST00000483941 PIK3CDO00329 1044 aa15.94■□□□□ 0.14
SMAD9-204ENST00000483941 CCL5P13501 91 aa15.94■□□□□ 0.14
SMAD9-204ENST00000483941 CTGFP29279 349 aa15.94■□□□□ 0.14
SMAD9-204ENST00000483941 GRK4P32298 578 aa15.94■□□□□ 0.14
SMAD9-204ENST00000483941 COPB2P35606 906 aa15.94■□□□□ 0.14
SMAD9-204ENST00000483941 PSMC4P43686 418 aa15.94■□□□□ 0.14
SMAD9-204ENST00000483941 NR5A1Q13285 461 aa15.94■□□□□ 0.14
SMAD9-204ENST00000483941 FOXD4L6Q3SYB3 417 aaPredicted RBP15.94■□□□□ 0.14
SMAD9-204ENST00000483941 ANO1Q5XXA6 986 aa15.94■□□□□ 0.14
SMAD9-204ENST00000483941 TYW1BQ6NUM6 668 aa15.94■□□□□ 0.14
SMAD9-204ENST00000483941 SAMD1Q6SPF0 538 aaPredicted RBP15.94■□□□□ 0.14
SMAD9-204ENST00000483941 C17orf99Q6UX52 265 aa15.94■□□□□ 0.14
SMAD9-204ENST00000483941 FOXD4L3Q6VB84 417 aaPredicted RBP15.94■□□□□ 0.14
SMAD9-204ENST00000483941 LBX2Q6XYB7 198 aa15.94■□□□□ 0.14
SMAD9-204ENST00000483941 CPA4Q9UI42 421 aa15.94■□□□□ 0.14
SMAD9-204ENST00000483941 PCDHA6Q9UN73 950 aa15.94■□□□□ 0.14
SMAD9-204ENST00000483941 PCDHA8Q9Y5H6 950 aa15.94■□□□□ 0.14
SMAD9-204ENST00000483941 A0A1W2PPC1 479 aa15.93■□□□□ 0.14
SMAD9-204ENST00000483941 SPDYE3A6NKU9 549 aa15.93■□□□□ 0.14
SMAD9-204ENST00000483941 M0R2N6 131 aa15.93■□□□□ 0.14
SMAD9-204ENST00000483941 FIBPO43427 364 aa15.93■□□□□ 0.14
SMAD9-204ENST00000483941 PPP1R11O60927 126 aaPredicted RBP15.93■□□□□ 0.14
SMAD9-204ENST00000483941 GJB1P08034 283 aa15.93■□□□□ 0.14
SMAD9-204ENST00000483941 HOXD10P28358 340 aa15.93■□□□□ 0.14
SMAD9-204ENST00000483941 NASPP49321 788 aaPredicted RBP15.93■□□□□ 0.14
SMAD9-204ENST00000483941 STK38Q15208 465 aa15.93■□□□□ 0.14
SMAD9-204ENST00000483941 NPY5RQ15761 445 aa15.93■□□□□ 0.14
SMAD9-204ENST00000483941 USH1GQ495M9 461 aa15.93■□□□□ 0.14
SMAD9-204ENST00000483941 PIK3AP1Q6ZUJ8 805 aa15.93■□□□□ 0.14
SMAD9-204ENST00000483941 OXER1Q8TDS5 423 aa15.93■□□□□ 0.14
SMAD9-204ENST00000483941 TNFRSF25Q93038 417 aa15.93■□□□□ 0.14
SMAD9-204ENST00000483941 ANP32EQ9BTT0 268 aa15.93■□□□□ 0.14
SMAD9-204ENST00000483941 RCOR1Q9UKL0 485 aa15.93■□□□□ 0.14
SMAD9-204ENST00000483941 CNPY2Q9Y2B0 182 aa15.93■□□□□ 0.14
SMAD9-204ENST00000483941 RABGAP1Q9Y3P9 1069 aa15.93■□□□□ 0.14
SMAD9-204ENST00000483941 MORC2Q9Y6X9 1032 aaPredicted RBP15.93■□□□□ 0.14
SMAD9-204ENST00000483941 ALPK3Q96L96 1907 aa15.93■□□□□ 0.14
SMAD9-204ENST00000483941 GCOM1H8Y6P7 765 aaPredicted RBP15.92■□□□□ 0.14
SMAD9-204ENST00000483941 PRPF40AO75400 957 aaKnown RBP15.92■□□□□ 0.14
SMAD9-204ENST00000483941 FARP2O94887 1054 aaPredicted RBP15.92■□□□□ 0.14
SMAD9-204ENST00000483941 MBD3O95983 291 aa15.92■□□□□ 0.14
SMAD9-204ENST00000483941 POLR2MP0CAP2 368 aa15.92■□□□□ 0.14
SMAD9-204ENST00000483941 ATG4CQ96DT6 458 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms