RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 ACRP10323 421 aa21.17■□□□□ 0.98
ATG4B-221ENST00000483778 CSF2RAP15509 400 aa21.17■□□□□ 0.98
ATG4B-221ENST00000483778 CALML3P27482 149 aa21.17■□□□□ 0.98
ATG4B-221ENST00000483778 CYP2C18P33260 490 aa21.17■□□□□ 0.98
ATG4B-221ENST00000483778 MFSD5Q6N075 450 aa21.17■□□□□ 0.98
ATG4B-221ENST00000483778 TRPV6Q9H1D0 765 aa21.17■□□□□ 0.98
ATG4B-221ENST00000483778 DIAPH3Q9NSV4 1193 aa21.17■□□□□ 0.98
ATG4B-221ENST00000483778 ZSWIM5Q9P217 1185 aa21.17■□□□□ 0.98
ATG4B-221ENST00000483778 SUPT16HQ9Y5B9 1047 aaKnown RBP21.17■□□□□ 0.98
ATG4B-221ENST00000483778 BAZ2BQ9UIF8 2168 aaKnown RBP21.16■□□□□ 0.98
ATG4B-221ENST00000483778 GBF1Q92538 1859 aa21.16■□□□□ 0.98
ATG4B-221ENST00000483778 UMODL1Q5DID0 1318 aa21.16■□□□□ 0.98
ATG4B-221ENST00000483778 MFAP1P55081 439 aaKnown RBP21.16■□□□□ 0.98
ATG4B-221ENST00000483778 ITGA7Q13683 1181 aa21.16■□□□□ 0.98
ATG4B-221ENST00000483778 TMEM240Q5SV17 173 aa21.16■□□□□ 0.98
ATG4B-221ENST00000483778 PPP1R13LQ8WUF5 828 aa21.16■□□□□ 0.98
ATG4B-221ENST00000483778 ESR2Q92731 530 aa21.16■□□□□ 0.98
ATG4B-221ENST00000483778 RNF41Q9H4P4 317 aaPredicted RBP21.16■□□□□ 0.98
ATG4B-221ENST00000483778 VTA1Q9NP79 307 aa21.16■□□□□ 0.98
ATG4B-221ENST00000483778 MROH7Q68CQ1 1323 aa21.15■□□□□ 0.98
ATG4B-221ENST00000483778 GRXCR1A8MXD5 290 aa21.15■□□□□ 0.98
ATG4B-221ENST00000483778 PCP11498 1178 aaKnown RBP21.15■□□□□ 0.98
ATG4B-221ENST00000483778 RPS6P62753 249 aaKnown RBP21.15■□□□□ 0.98
ATG4B-221ENST00000483778 RNF207Q6ZRF8 634 aa21.15■□□□□ 0.98
ATG4B-221ENST00000483778 DGKHQ86XP1 1220 aa21.15■□□□□ 0.98
ATG4B-221ENST00000483778 MYLIPQ8WY64 445 aa21.15■□□□□ 0.98
ATG4B-221ENST00000483778 WDR11Q9BZH6 1224 aa21.15■□□□□ 0.98
ATG4B-221ENST00000483778 SCN5AQ14524 2016 aa21.15■□□□□ 0.98
ATG4B-221ENST00000483778 MYH7BA7E2Y1 1941 aa21.14■□□□□ 0.98
ATG4B-221ENST00000483778 CDH23Q9H251 3354 aa21.14■□□□□ 0.97
ATG4B-221ENST00000483778 RBM47A0AV96 593 aaKnown RBP21.14■□□□□ 0.97
ATG4B-221ENST00000483778 USH1GQ495M9 461 aa21.14■□□□□ 0.97
ATG4B-221ENST00000483778 DUSP28Q4G0W2 176 aa21.14■□□□□ 0.97
ATG4B-221ENST00000483778 ZNF365Q70YC5 407 aa21.14■□□□□ 0.97
ATG4B-221ENST00000483778 ENAHQ8N8S7 591 aaPredicted RBP21.14■□□□□ 0.97
ATG4B-221ENST00000483778 PNMA1Q8ND90 353 aa21.14■□□□□ 0.97
ATG4B-221ENST00000483778 ANKS1AQ92625 1134 aa21.14■□□□□ 0.97
ATG4B-221ENST00000483778 COPS5Q92905 334 aa21.14■□□□□ 0.97
ATG4B-221ENST00000483778 Q9Y3F1 56 aa21.14■□□□□ 0.97
ATG4B-221ENST00000483778 KIAA1217Q5T5P2 1943 aa21.14■□□□□ 0.97
ATG4B-221ENST00000483778 ZSCAN10Q96SZ4 725 aaPredicted RBP21.13■□□□□ 0.97
ATG4B-221ENST00000483778 DSCC1Q9BVC3 393 aa21.13■□□□□ 0.97
ATG4B-221ENST00000483778 ADD3Q9UEY8 706 aaKnown RBP21.13■□□□□ 0.97
ATG4B-221ENST00000483778 TRIP12Q14669 1992 aaPredicted RBP21.13■□□□□ 0.97
ATG4B-221ENST00000483778 SCN10AQ9Y5Y9 1956 aa21.12■□□□□ 0.97
ATG4B-221ENST00000483778 TLR3O15455 904 aaKnown RBP21.12■□□□□ 0.97
ATG4B-221ENST00000483778 B4GALT4O60513 344 aa21.12■□□□□ 0.97
ATG4B-221ENST00000483778 GSPT1P15170 499 aaKnown RBP21.12■□□□□ 0.97
ATG4B-221ENST00000483778 PBX2P40425 430 aa21.12■□□□□ 0.97
ATG4B-221ENST00000483778 IRX6P78412 446 aaPredicted RBP21.12■□□□□ 0.97
ATG4B-221ENST00000483778 RASIP1Q5U651 963 aa21.12■□□□□ 0.97
ATG4B-221ENST00000483778 ADGRF4Q8IZF3 695 aa21.12■□□□□ 0.97
ATG4B-221ENST00000483778 VWCEQ96DN2 955 aa21.12■□□□□ 0.97
ATG4B-221ENST00000483778 CHD9Q3L8U1 2897 aa21.11■□□□□ 0.97
ATG4B-221ENST00000483778 WDR19Q8NEZ3 1342 aa21.11■□□□□ 0.97
ATG4B-221ENST00000483778 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.11■□□□□ 0.97
ATG4B-221ENST00000483778 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.11■□□□□ 0.97
ATG4B-221ENST00000483778 CABYRO75952 493 aa21.11■□□□□ 0.97
ATG4B-221ENST00000483778 EDNRBP24530 442 aa21.11■□□□□ 0.97
ATG4B-221ENST00000483778 PPIGQ13427 754 aaKnown RBP eCLIP21.11■□□□□ 0.971e-10■■□□□ 12.8
ATG4B-221ENST00000483778 GPATCH4Q5T3I0 446 aaKnown RBP21.11■□□□□ 0.97
ATG4B-221ENST00000483778 VAT1LQ9HCJ6 419 aa21.11■□□□□ 0.97
ATG4B-221ENST00000483778 COL20A1Q9P218 1284 aa21.11■□□□□ 0.97
ATG4B-221ENST00000483778 RBAK-RBAKDNI3L0D1 243 aa21.1■□□□□ 0.97
ATG4B-221ENST00000483778 DNAJB2P25686 324 aa21.1■□□□□ 0.97
ATG4B-221ENST00000483778 CCL23P55773 120 aa21.1■□□□□ 0.97
ATG4B-221ENST00000483778 PDE4DQ08499 809 aa21.1■□□□□ 0.97
ATG4B-221ENST00000483778 GRIN2CQ14957 1233 aa21.1■□□□□ 0.97
ATG4B-221ENST00000483778 CDC37Q16543 378 aaPredicted RBP21.1■□□□□ 0.97
ATG4B-221ENST00000483778 CYB5R4Q7L1T6 521 aa21.1■□□□□ 0.97
ATG4B-221ENST00000483778 IQCA1Q86XH1 822 aa21.1■□□□□ 0.97
ATG4B-221ENST00000483778 STAG2Q8N3U4 1231 aa21.1■□□□□ 0.97
ATG4B-221ENST00000483778 TMEM199Q8N511 208 aa21.1■□□□□ 0.97
ATG4B-221ENST00000483778 TAAR1Q96RJ0 339 aa21.1■□□□□ 0.97
ATG4B-221ENST00000483778 NOC4LQ9BVI4 516 aaKnown RBP21.1■□□□□ 0.97
ATG4B-221ENST00000483778 HIPK3Q9H422 1215 aa21.1■□□□□ 0.97
ATG4B-221ENST00000483778 KAT14Q9H8E8 782 aa21.1■□□□□ 0.97
ATG4B-221ENST00000483778 CXXC1Q9P0U4 656 aaPredicted RBP21.1■□□□□ 0.97
ATG4B-221ENST00000483778 TNKSO95271 1327 aa21.09■□□□□ 0.97
ATG4B-221ENST00000483778 HIP1O00291 1037 aa21.09■□□□□ 0.97
ATG4B-221ENST00000483778 ZEB2O60315 1214 aa21.09■□□□□ 0.97
ATG4B-221ENST00000483778 ARIH2O95376 493 aa21.09■□□□□ 0.97
ATG4B-221ENST00000483778 MYL3P08590 195 aa21.09■□□□□ 0.97
ATG4B-221ENST00000483778 PURAQ00577 322 aaKnown RBP21.09■□□□□ 0.97
ATG4B-221ENST00000483778 IMMTQ16891 758 aaKnown RBP21.09■□□□□ 0.97
ATG4B-221ENST00000483778 QRICH1Q2TAL8 776 aa21.09■□□□□ 0.97
ATG4B-221ENST00000483778 OR6J1Q8NGC5 347 aa21.09■□□□□ 0.97
ATG4B-221ENST00000483778 WNT8AQ9H1J5 351 aa21.09■□□□□ 0.97
ATG4B-221ENST00000483778 JMJD4Q9H9V9 463 aa21.09■□□□□ 0.97
ATG4B-221ENST00000483778 IL23AQ9NPF7 189 aa21.09■□□□□ 0.97
ATG4B-221ENST00000483778 TAF6LQ9Y6J9 622 aa21.09■□□□□ 0.97
ATG4B-221ENST00000483778 TET1Q8NFU7 2136 aa21.08■□□□□ 0.97
ATG4B-221ENST00000483778 LOC102724159A0A0B4J2E5 919 aa21.08■□□□□ 0.97
ATG4B-221ENST00000483778 PTH1RQ03431 593 aa21.08■□□□□ 0.97
ATG4B-221ENST00000483778 PWP2Q15269 919 aaKnown RBP21.08■□□□□ 0.97
ATG4B-221ENST00000483778 SEC23AQ15436 765 aa21.08■□□□□ 0.97
ATG4B-221ENST00000483778 TTC22Q5TAA0 569 aa21.08■□□□□ 0.97
ATG4B-221ENST00000483778 RGS22Q8NE09 1264 aa21.08■□□□□ 0.97
ATG4B-221ENST00000483778 MAFAQ8NHW3 353 aaPredicted RBP21.08■□□□□ 0.97
ATG4B-221ENST00000483778 ALDH8A1Q9H2A2 487 aaPredicted RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms