RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 RCSD1Q6JBY9 416 aa5.35□□□□□ -1.55
LAPTM4A-202ENST00000483117 NT5DC4Q86YG4 428 aa5.35□□□□□ -1.55
LAPTM4A-202ENST00000483117 CPNE8Q86YQ8 564 aa5.35□□□□□ -1.55
LAPTM4A-202ENST00000483117 C19orf47Q8N9M1 422 aaKnown RBP5.35□□□□□ -1.55
LAPTM4A-202ENST00000483117 NLGN2Q8NFZ4 835 aa5.35□□□□□ -1.55
LAPTM4A-202ENST00000483117 SPATA32Q96LK8 384 aa5.35□□□□□ -1.55
LAPTM4A-202ENST00000483117 GBP3Q9H0R5 595 aa5.35□□□□□ -1.55
LAPTM4A-202ENST00000483117 BCAS3Q9H6U6 928 aa5.35□□□□□ -1.55
LAPTM4A-202ENST00000483117 FBLN5Q9UBX5 448 aa5.35□□□□□ -1.55
LAPTM4A-202ENST00000483117 CGGBP1Q9UFW8 167 aaPredicted RBP5.35□□□□□ -1.55
LAPTM4A-202ENST00000483117 DBR1Q9UK59 544 aaKnown RBP5.35□□□□□ -1.55
LAPTM4A-202ENST00000483117 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.35□□□□□ -1.55
LAPTM4A-202ENST00000483117 RWDD3Q9Y3V2 267 aa5.35□□□□□ -1.55
LAPTM4A-202ENST00000483117 PPP1R11O60927 126 aaPredicted RBP5.34□□□□□ -1.55
LAPTM4A-202ENST00000483117 PPM1BO75688 479 aa5.34□□□□□ -1.55
LAPTM4A-202ENST00000483117 PLA2G1BP04054 148 aaKnown RBP5.34□□□□□ -1.55
LAPTM4A-202ENST00000483117 GLI4P10075 376 aa5.34□□□□□ -1.55
LAPTM4A-202ENST00000483117 MC3RP41968 323 aa5.34□□□□□ -1.55
LAPTM4A-202ENST00000483117 FOXO4P98177 505 aa5.34□□□□□ -1.55
LAPTM4A-202ENST00000483117 TARBP2Q15633 366 aaKnown RBP5.34□□□□□ -1.55
LAPTM4A-202ENST00000483117 SP8Q8IXZ3 490 aa5.34□□□□□ -1.55
LAPTM4A-202ENST00000483117 ADGRG2Q8IZP9 1017 aa5.34□□□□□ -1.55
LAPTM4A-202ENST00000483117 OR6P1Q8NGX9 317 aa5.34□□□□□ -1.55
LAPTM4A-202ENST00000483117 SHDQ96IW2 340 aa5.34□□□□□ -1.55
LAPTM4A-202ENST00000483117 ADAM7Q9H2U9 754 aa5.34□□□□□ -1.55
LAPTM4A-202ENST00000483117 SUSD2Q9UGT4 822 aa5.34□□□□□ -1.55
LAPTM4A-202ENST00000483117 SUGT1Q9Y2Z0 365 aa5.34□□□□□ -1.55
LAPTM4A-202ENST00000483117 BACE2Q9Y5Z0 518 aa5.34□□□□□ -1.55
LAPTM4A-202ENST00000483117 A0A1B0GTL3 188 aa5.33□□□□□ -1.56
LAPTM4A-202ENST00000483117 C2orf71A6NGG8 1288 aa5.33□□□□□ -1.56
LAPTM4A-202ENST00000483117 ASGR2P07307 311 aa5.33□□□□□ -1.56
LAPTM4A-202ENST00000483117 GJA8P48165 433 aa5.33□□□□□ -1.56
LAPTM4A-202ENST00000483117 SEPHS1P49903 392 aa5.33□□□□□ -1.56
LAPTM4A-202ENST00000483117 AMPD2Q01433 879 aa5.33□□□□□ -1.56
LAPTM4A-202ENST00000483117 KIAA1211LQ6NV74 962 aa5.33□□□□□ -1.56
LAPTM4A-202ENST00000483117 NLGN1Q8N2Q7 840 aa5.33□□□□□ -1.56
LAPTM4A-202ENST00000483117 ARHGEF39Q8N4T4 335 aa5.33□□□□□ -1.56
LAPTM4A-202ENST00000483117 ALG3Q92685 438 aa5.33□□□□□ -1.56
LAPTM4A-202ENST00000483117 MRRFQ96E11 262 aaKnown RBP5.33□□□□□ -1.56
LAPTM4A-202ENST00000483117 LUC7LQ9NQ29 371 aaKnown RBP5.33□□□□□ -1.56
LAPTM4A-202ENST00000483117 GULP1Q9UBP9 304 aa5.33□□□□□ -1.56
LAPTM4A-202ENST00000483117 SLURP1P55000 103 aa5.32□□□□□ -1.56
LAPTM4A-202ENST00000483117 SKOR2Q2VWA4 1001 aaPredicted RBP5.32□□□□□ -1.56
LAPTM4A-202ENST00000483117 VWA3BQ502W6 1294 aa5.32□□□□□ -1.56
LAPTM4A-202ENST00000483117 LZTR1Q8N653 840 aa5.32□□□□□ -1.56
LAPTM4A-202ENST00000483117 FAM169BQ8N8A8 192 aa5.32□□□□□ -1.56
LAPTM4A-202ENST00000483117 ZNF513Q8N8E2 541 aaPredicted RBP5.32□□□□□ -1.56
LAPTM4A-202ENST00000483117 CXorf38Q8TB03 319 aa5.32□□□□□ -1.56
LAPTM4A-202ENST00000483117 FNIP1Q8TF40 1166 aa5.32□□□□□ -1.56
LAPTM4A-202ENST00000483117 CPLX3Q8WVH0 158 aa5.32□□□□□ -1.56
LAPTM4A-202ENST00000483117 RCC1LQ96I51 464 aaKnown RBP5.32□□□□□ -1.56
LAPTM4A-202ENST00000483117 APEX2Q9UBZ4 518 aa5.32□□□□□ -1.56
LAPTM4A-202ENST00000483117 FAN1Q9Y2M0 1017 aa5.32□□□□□ -1.56
LAPTM4A-202ENST00000483117 PMF1-BGLAPU3KQ54 211 aa5.32□□□□□ -1.56
LAPTM4A-202ENST00000483117 NCAM1P13591 858 aa5.31□□□□□ -1.56
LAPTM4A-202ENST00000483117 PAMP19021 973 aa5.31□□□□□ -1.56
LAPTM4A-202ENST00000483117 PMLP29590 882 aa5.31□□□□□ -1.56
LAPTM4A-202ENST00000483117 KCNC1P48547 511 aa5.31□□□□□ -1.56
LAPTM4A-202ENST00000483117 CASP7P55210 303 aa5.31□□□□□ -1.56
LAPTM4A-202ENST00000483117 GRB10Q13322 594 aa5.31□□□□□ -1.56
LAPTM4A-202ENST00000483117 VHLLQ6RSH7 139 aa5.31□□□□□ -1.56
LAPTM4A-202ENST00000483117 DBX2Q6ZNG2 339 aa5.31□□□□□ -1.56
LAPTM4A-202ENST00000483117 CABP7Q86V35 215 aa5.31□□□□□ -1.56
LAPTM4A-202ENST00000483117 ZNF526Q8TF50 670 aaPredicted RBP5.31□□□□□ -1.56
LAPTM4A-202ENST00000483117 MTA3Q9BTC8 594 aa5.31□□□□□ -1.56
LAPTM4A-202ENST00000483117 RNF38Q9H0F5 515 aa5.31□□□□□ -1.56
LAPTM4A-202ENST00000483117 KIAA1522Q9P206 1035 aaPredicted RBP5.31□□□□□ -1.56
LAPTM4A-202ENST00000483117 AKT3Q9Y243 479 aa5.31□□□□□ -1.56
LAPTM4A-202ENST00000483117 NPHP3-ACAD11A0A0J9YXS1 232 aa5.3□□□□□ -1.56
LAPTM4A-202ENST00000483117 C7orf72A4D263 438 aa5.3□□□□□ -1.56
LAPTM4A-202ENST00000483117 KCNH1O95259 989 aa5.3□□□□□ -1.56
LAPTM4A-202ENST00000483117 HTRA3P83110 453 aa5.3□□□□□ -1.56
LAPTM4A-202ENST00000483117 CAP1Q01518 475 aa5.3□□□□□ -1.56
LAPTM4A-202ENST00000483117 USP33Q8TEY7 942 aa5.3□□□□□ -1.56
LAPTM4A-202ENST00000483117 TSPAN17Q96FV3 270 aa5.3□□□□□ -1.56
LAPTM4A-202ENST00000483117 SPATA25Q9BR10 227 aa5.3□□□□□ -1.56
LAPTM4A-202ENST00000483117 LGR4Q9BXB1 951 aa5.3□□□□□ -1.56
LAPTM4A-202ENST00000483117 ACBD3Q9H3P7 528 aa5.3□□□□□ -1.56
LAPTM4A-202ENST00000483117 CLEC1BQ9P126 229 aa5.3□□□□□ -1.56
LAPTM4A-202ENST00000483117 ANKRD34BA5PLL1 514 aa5.29□□□□□ -1.56
LAPTM4A-202ENST00000483117 UNCXA6NJT0 531 aa5.29□□□□□ -1.56
LAPTM4A-202ENST00000483117 SCRN1Q12765 414 aa5.29□□□□□ -1.56
LAPTM4A-202ENST00000483117 MBLAC2Q68D91 279 aa5.29□□□□□ -1.56
LAPTM4A-202ENST00000483117 LIPIQ6XZB0 460 aa5.29□□□□□ -1.56
LAPTM4A-202ENST00000483117 NETO2Q8NC67 525 aa5.29□□□□□ -1.56
LAPTM4A-202ENST00000483117 ANAPC16Q96DE5 110 aa5.29□□□□□ -1.56
LAPTM4A-202ENST00000483117 TEPSINQ96N21 525 aa5.29□□□□□ -1.56
LAPTM4A-202ENST00000483117 GPRC5CQ9NQ84 441 aa5.29□□□□□ -1.56
LAPTM4A-202ENST00000483117 SIT1Q9Y3P8 196 aa5.29□□□□□ -1.56
LAPTM4A-202ENST00000483117 PRICKLE3O43900 615 aaPredicted RBP5.28□□□□□ -1.56
LAPTM4A-202ENST00000483117 NPHS1O60500 1241 aa5.28□□□□□ -1.56
LAPTM4A-202ENST00000483117 FUCA1P04066 466 aa5.28□□□□□ -1.56
LAPTM4A-202ENST00000483117 NTRK1P04629 796 aa5.28□□□□□ -1.56
LAPTM4A-202ENST00000483117 CELA3BP08861 270 aa5.28□□□□□ -1.56
LAPTM4A-202ENST00000483117 PLS3P13797 630 aa5.28□□□□□ -1.56
LAPTM4A-202ENST00000483117 DLX2Q07687 328 aaPredicted RBP5.28□□□□□ -1.56
LAPTM4A-202ENST00000483117 WWC2Q6AWC2 1192 aa5.28□□□□□ -1.56
LAPTM4A-202ENST00000483117 FRMD5Q7Z6J6 570 aa5.28□□□□□ -1.56
LAPTM4A-202ENST00000483117 PRRT2Q7Z6L0 340 aaPredicted RBP5.28□□□□□ -1.56
LAPTM4A-202ENST00000483117 B3GNT8Q7Z7M8 397 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms