RNA–Protein interactions for RNA: ENST00000482287.5

KPNA1-207, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 3

Gene KPNA1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-207ENST00000482287 LRCH3Q96II8 777 aa6.9□□□□□ -1.3
KPNA1-207ENST00000482287 KAT14Q9H8E8 782 aa6.9□□□□□ -1.3
KPNA1-207ENST00000482287 SENP2Q9HC62 589 aa6.9□□□□□ -1.3
KPNA1-207ENST00000482287 MAD2L2Q9UI95 211 aa6.9□□□□□ -1.3
KPNA1-207ENST00000482287 PNMA2Q9UL42 364 aa6.9□□□□□ -1.3
KPNA1-207ENST00000482287 GNEQ9Y223 722 aaKnown RBP6.9□□□□□ -1.3
KPNA1-207ENST00000482287 TMA7Q9Y2S6 64 aaKnown RBP6.9□□□□□ -1.3
KPNA1-207ENST00000482287 ZNF536O15090 1300 aa6.9□□□□□ -1.3
KPNA1-207ENST00000482287 CNTNAP5Q8WYK1 1306 aa6.9□□□□□ -1.3
KPNA1-207ENST00000482287 GPR25O00155 361 aa6.89□□□□□ -1.31
KPNA1-207ENST00000482287 FLOT1O75955 427 aa6.89□□□□□ -1.31
KPNA1-207ENST00000482287 ZNF16P17020 682 aaPredicted RBP6.89□□□□□ -1.31
KPNA1-207ENST00000482287 LIG1P18858 919 aa6.89□□□□□ -1.31
KPNA1-207ENST00000482287 KIF5BP33176 963 aa6.89□□□□□ -1.31
KPNA1-207ENST00000482287 CTCFP49711 727 aaPredicted RBP6.89□□□□□ -1.31
KPNA1-207ENST00000482287 COG2Q14746 738 aa6.89□□□□□ -1.31
KPNA1-207ENST00000482287 ZYXQ15942 572 aaKnown RBP6.89□□□□□ -1.31
KPNA1-207ENST00000482287 SLC35G1Q2M3R5 365 aa6.89□□□□□ -1.31
KPNA1-207ENST00000482287 FOXD4L6Q3SYB3 417 aaPredicted RBP6.89□□□□□ -1.31
KPNA1-207ENST00000482287 WDR78Q5VTH9 848 aa6.89□□□□□ -1.31
KPNA1-207ENST00000482287 FOXD4L3Q6VB84 417 aaPredicted RBP6.89□□□□□ -1.31
KPNA1-207ENST00000482287 TMTC3Q6ZXV5 915 aa6.89□□□□□ -1.31
KPNA1-207ENST00000482287 RIOX2Q8IUF8 465 aa6.89□□□□□ -1.31
KPNA1-207ENST00000482287 ABRAQ8N0Z2 381 aa6.89□□□□□ -1.31
KPNA1-207ENST00000482287 SPICE1Q8N0Z3 855 aa6.89□□□□□ -1.31
KPNA1-207ENST00000482287 STK11IPQ8N1F8 1099 aa6.89□□□□□ -1.31
KPNA1-207ENST00000482287 IPO4Q8TEX9 1081 aaKnown RBP6.89□□□□□ -1.31
KPNA1-207ENST00000482287 SOCS4Q8WXH5 440 aa6.89□□□□□ -1.31
KPNA1-207ENST00000482287 ATG4CQ96DT6 458 aa6.89□□□□□ -1.31
KPNA1-207ENST00000482287 CALR3Q96L12 384 aaKnown RBP6.89□□□□□ -1.31
KPNA1-207ENST00000482287 ZKSCAN3Q9BRR0 538 aa6.89□□□□□ -1.31
KPNA1-207ENST00000482287 TEX13BQ9BXU2 312 aa6.89□□□□□ -1.31
KPNA1-207ENST00000482287 TANGO6Q9C0B7 1094 aa6.89□□□□□ -1.31
KPNA1-207ENST00000482287 RIOX1Q9H6W3 641 aa6.89□□□□□ -1.31
KPNA1-207ENST00000482287 UPF2Q9HAU5 1272 aaKnown RBP6.89□□□□□ -1.31
KPNA1-207ENST00000482287 TXNRD2Q9NNW7 524 aa6.89□□□□□ -1.31
KPNA1-207ENST00000482287 FBXO28Q9NVF7 368 aa6.89□□□□□ -1.31
KPNA1-207ENST00000482287 HOXC10Q9NYD6 342 aa6.89□□□□□ -1.31
KPNA1-207ENST00000482287 RBPJLQ9UBG7 517 aa6.89□□□□□ -1.31
KPNA1-207ENST00000482287 HPS5Q9UPZ3 1129 aa6.89□□□□□ -1.31
KPNA1-207ENST00000482287 CYP46A1Q9Y6A2 500 aa6.89□□□□□ -1.31
KPNA1-207ENST00000482287 FRMPD4Q14CM0 1322 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 STK36Q9NRP7 1315 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 hCG_1984214I3L0E3 225 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 CYTH3O43739 400 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 TRPA1O75762 1119 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 ICAM1P05362 532 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 HOXC6P09630 235 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 PARP1P09874 1014 aaKnown RBP6.88□□□□□ -1.31
KPNA1-207ENST00000482287 MAPK4P31152 587 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 PRMT2P55345 433 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 IGBP1P78318 339 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 CAP1Q01518 475 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 GRM1Q13255 1194 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 GRB14Q14449 540 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 TMEM132BQ14DG7 1078 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 RABEP1Q15276 862 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 ANKRD1Q15327 319 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 SKIV2LQ15477 1246 aaKnown RBP6.88□□□□□ -1.31
KPNA1-207ENST00000482287 AMHR2Q16671 573 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 NAALADL2Q58DX5 795 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 SYDE2Q5VT97 1194 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 ZNF662Q6ZS27 426 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 CATIPQ7Z7H3 387 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 ZNF713Q8N859 430 aaPredicted RBP6.88□□□□□ -1.31
KPNA1-207ENST00000482287 CHURC1Q8WUH1 139 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 ZNF296Q8WUU4 475 aaPredicted RBP6.88□□□□□ -1.31
KPNA1-207ENST00000482287 USP6NLQ92738 828 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 ZNF274Q96GC6 653 aaPredicted RBP6.88□□□□□ -1.31
KPNA1-207ENST00000482287 NUP88Q99567 741 aaPredicted RBP6.88□□□□□ -1.31
KPNA1-207ENST00000482287 LZTS2Q9BRK4 669 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 BEGAINQ9BUH8 593 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 C22orf23Q9BZE7 217 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 UPF3BQ9BZI7 483 aaKnown RBP6.88□□□□□ -1.31
KPNA1-207ENST00000482287 SPATC1LQ9H0A9 340 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 R3HDMLQ9H3Y0 253 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 FAM217BQ9NTX9 383 aaPredicted RBP6.88□□□□□ -1.31
KPNA1-207ENST00000482287 RBM28Q9NW13 759 aaKnown RBP6.88□□□□□ -1.31
KPNA1-207ENST00000482287 BTBD7Q9P203 1132 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 PRR12Q9ULL5 1215 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 SLC12A7Q9Y666 1083 aa6.88□□□□□ -1.31
KPNA1-207ENST00000482287 DNAJC25-GNG10A0A024R161 153 aa6.87□□□□□ -1.31
KPNA1-207ENST00000482287 CCDC69A6NI79 296 aa6.87□□□□□ -1.31
KPNA1-207ENST00000482287 GOLGA8BA8MQT2 603 aa6.87□□□□□ -1.31
KPNA1-207ENST00000482287 TMEM232C9JQI7 657 aa6.87□□□□□ -1.31
KPNA1-207ENST00000482287 ZBTB43O43298 467 aa6.87□□□□□ -1.31
KPNA1-207ENST00000482287 CREB3O43889 395 aa6.87□□□□□ -1.31
KPNA1-207ENST00000482287 GFRA3O60609 400 aa6.87□□□□□ -1.31
KPNA1-207ENST00000482287 FKTNO75072 461 aa6.87□□□□□ -1.31
KPNA1-207ENST00000482287 SLC25A27O95847 323 aa6.87□□□□□ -1.31
KPNA1-207ENST00000482287 VAMP1P23763 118 aa6.87□□□□□ -1.31
KPNA1-207ENST00000482287 CTGFP29279 349 aa6.87□□□□□ -1.31
KPNA1-207ENST00000482287 GNAQP50148 359 aa6.87□□□□□ -1.31
KPNA1-207ENST00000482287 CCNA1P78396 465 aa6.87□□□□□ -1.31
KPNA1-207ENST00000482287 ATP2B2Q01814 1243 aa6.87□□□□□ -1.31
KPNA1-207ENST00000482287 SP3Q02447 781 aa6.87□□□□□ -1.31
KPNA1-207ENST00000482287 CAMK2BQ13554 666 aa6.87□□□□□ -1.31
KPNA1-207ENST00000482287 NTRK3Q16288 839 aa6.87□□□□□ -1.31
KPNA1-207ENST00000482287 TKFCQ3LXA3 575 aa6.87□□□□□ -1.31
KPNA1-207ENST00000482287 PPP1R18Q6NYC8 613 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms