RNA–Protein interactions for RNA: ENST00000482000.1

PRKCB-206, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-206ENST00000482000 TJP1Q07157 1748 aa6.71□□□□□ -1.34
PRKCB-206ENST00000482000 KDM6AO15550 1401 aaPredicted RBP6.71□□□□□ -1.34
PRKCB-206ENST00000482000 MEIS3P2A8K0S8 358 aa6.71□□□□□ -1.34
PRKCB-206ENST00000482000 CHURC1-FNTBB4DL54 471 aa6.71□□□□□ -1.34
PRKCB-206ENST00000482000 FGRP09769 529 aa6.71□□□□□ -1.34
PRKCB-206ENST00000482000 IMPDH2P12268 514 aa6.71□□□□□ -1.34
PRKCB-206ENST00000482000 POLD1P28340 1107 aa6.71□□□□□ -1.34
PRKCB-206ENST00000482000 ADMP35318 185 aa6.71□□□□□ -1.34
PRKCB-206ENST00000482000 SMIM5Q71RC9 77 aa6.71□□□□□ -1.34
PRKCB-206ENST00000482000 SLFN12Q8IYM2 578 aa6.71□□□□□ -1.34
PRKCB-206ENST00000482000 MFSD2AQ8NA29 543 aa6.71□□□□□ -1.34
PRKCB-206ENST00000482000 SMARCC1Q92922 1105 aaPredicted RBP6.71□□□□□ -1.34
PRKCB-206ENST00000482000 FERD3LQ96RJ6 166 aa6.71□□□□□ -1.34
PRKCB-206ENST00000482000 ANTXR1Q9H6X2 564 aa6.71□□□□□ -1.34
PRKCB-206ENST00000482000 GMIPQ9P107 970 aa6.71□□□□□ -1.34
PRKCB-206ENST00000482000 ASAP1Q9ULH1 1129 aa6.71□□□□□ -1.34
PRKCB-206ENST00000482000 ADAMTS7Q9UKP4 1686 aa6.71□□□□□ -1.34
PRKCB-206ENST00000482000 KDRP35968 1356 aa6.7□□□□□ -1.34
PRKCB-206ENST00000482000 N4BP2Q86UW6 1770 aaPredicted RBP6.7□□□□□ -1.34
PRKCB-206ENST00000482000 DYRK3O43781 588 aa6.7□□□□□ -1.34
PRKCB-206ENST00000482000 DNAJA1P31689 397 aaKnown RBP6.7□□□□□ -1.34
PRKCB-206ENST00000482000 NFIAQ12857 509 aa6.7□□□□□ -1.34
PRKCB-206ENST00000482000 ITPK1Q13572 414 aa6.7□□□□□ -1.34
PRKCB-206ENST00000482000 LRRFIP1Q32MZ4 808 aaKnown RBP6.7□□□□□ -1.34
PRKCB-206ENST00000482000 PRAMEF13Q5VWM6 474 aa6.7□□□□□ -1.34
PRKCB-206ENST00000482000 CDCP2Q5VXM1 449 aa6.7□□□□□ -1.34
PRKCB-206ENST00000482000 ARMCX6Q7L4S7 300 aa6.7□□□□□ -1.34
PRKCB-206ENST00000482000 ZAR1Q86SH2 424 aa6.7□□□□□ -1.34
PRKCB-206ENST00000482000 SLC51AQ86UW1 340 aa6.7□□□□□ -1.34
PRKCB-206ENST00000482000 MCF2L2Q86YR7 1114 aa6.7□□□□□ -1.34
PRKCB-206ENST00000482000 IFNL2Q8IZJ0 200 aa6.7□□□□□ -1.34
PRKCB-206ENST00000482000 SHISA5Q8N114 240 aa6.7□□□□□ -1.34
PRKCB-206ENST00000482000 LINC00116Q8NCU8 138 aa6.7□□□□□ -1.34
PRKCB-206ENST00000482000 FAM13CQ8NE31 585 aa6.7□□□□□ -1.34
PRKCB-206ENST00000482000 ATG4CQ96DT6 458 aa6.7□□□□□ -1.34
PRKCB-206ENST00000482000 SRRTQ9BXP5 876 aaKnown RBP6.7□□□□□ -1.34
PRKCB-206ENST00000482000 TMOD3Q9NYL9 352 aa6.7□□□□□ -1.34
PRKCB-206ENST00000482000 STRIP2Q9ULQ0 834 aa6.7□□□□□ -1.34
PRKCB-206ENST00000482000 KIF7Q2M1P5 1343 aa6.7□□□□□ -1.34
PRKCB-206ENST00000482000 YBX3P16989 372 aaKnown RBP eCLIP6.69□□□□□ -1.343e-11■□□□□ 10.8
PRKCB-206ENST00000482000 FSTP19883 344 aa6.69□□□□□ -1.34
PRKCB-206ENST00000482000 GIPRP48546 466 aa6.69□□□□□ -1.34
PRKCB-206ENST00000482000 YARSP54577 528 aaKnown RBP6.69□□□□□ -1.34
PRKCB-206ENST00000482000 CDK5R2Q13319 367 aa6.69□□□□□ -1.34
PRKCB-206ENST00000482000 OGFOD3Q6PK18 319 aa6.69□□□□□ -1.34
PRKCB-206ENST00000482000 CCDC81Q6ZN84 652 aa6.69□□□□□ -1.34
PRKCB-206ENST00000482000 TMEM40Q8WWA1 233 aa6.69□□□□□ -1.34
PRKCB-206ENST00000482000 SHDQ96IW2 340 aa6.69□□□□□ -1.34
PRKCB-206ENST00000482000 MFSD14AQ96MC6 490 aa6.69□□□□□ -1.34
PRKCB-206ENST00000482000 TBC1D32Q96NH3 1257 aa6.69□□□□□ -1.34
PRKCB-206ENST00000482000 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.69□□□□□ -1.34
PRKCB-206ENST00000482000 CNNM2Q9H8M5 875 aa6.69□□□□□ -1.34
PRKCB-206ENST00000482000 ATG3Q9NT62 314 aa6.69□□□□□ -1.34
PRKCB-206ENST00000482000 KLHL3Q9UH77 587 aa6.69□□□□□ -1.34
PRKCB-206ENST00000482000 UBR2Q8IWV8 1755 aa6.69□□□□□ -1.34
PRKCB-206ENST00000482000 SIPA1L3O60292 1781 aaPredicted RBP6.68□□□□□ -1.34
PRKCB-206ENST00000482000 GSC2O15499 205 aa6.68□□□□□ -1.34
PRKCB-206ENST00000482000 SLITRK5O94991 958 aa6.68□□□□□ -1.34
PRKCB-206ENST00000482000 IGLV1-40P01703 118 aa6.68□□□□□ -1.34
PRKCB-206ENST00000482000 FURINP09958 794 aa6.68□□□□□ -1.34
PRKCB-206ENST00000482000 EIF6P56537 245 aaKnown RBP6.68□□□□□ -1.34
PRKCB-206ENST00000482000 GPR162Q16538 588 aa6.68□□□□□ -1.34
PRKCB-206ENST00000482000 INTS3Q68E01 1043 aaKnown RBP6.68□□□□□ -1.34
PRKCB-206ENST00000482000 OVOS1Q6IE37 1185 aa6.68□□□□□ -1.34
PRKCB-206ENST00000482000 MORC1Q86VD1 984 aa6.68□□□□□ -1.34
PRKCB-206ENST00000482000 FLAD1Q8NFF5 587 aa6.68□□□□□ -1.34
PRKCB-206ENST00000482000 GIMAP7Q8NHV1 300 aa6.68□□□□□ -1.34
PRKCB-206ENST00000482000 DPH2Q9BQC3 489 aaPredicted RBP6.68□□□□□ -1.34
PRKCB-206ENST00000482000 DBNDD2Q9BQY9 259 aa6.68□□□□□ -1.34
PRKCB-206ENST00000482000 DUSP23Q9BVJ7 150 aa6.68□□□□□ -1.34
PRKCB-206ENST00000482000 PRDM10Q9NQV6 1147 aa6.68□□□□□ -1.34
PRKCB-206ENST00000482000 MRC1P22897 1456 aa6.67□□□□□ -1.34
PRKCB-206ENST00000482000 ERVV-2B6SEH9 535 aa6.67□□□□□ -1.34
PRKCB-206ENST00000482000 LEFTY1O75610 366 aa6.67□□□□□ -1.34
PRKCB-206ENST00000482000 EOMESO95936 686 aa6.67□□□□□ -1.34
PRKCB-206ENST00000482000 F13BP05160 661 aa6.67□□□□□ -1.34
PRKCB-206ENST00000482000 NME1P15531 152 aaKnown RBP6.67□□□□□ -1.34
PRKCB-206ENST00000482000 HMGB2P26583 209 aaKnown RBP6.67□□□□□ -1.34
PRKCB-206ENST00000482000 IL13P35225 146 aa6.67□□□□□ -1.34
PRKCB-206ENST00000482000 ARSHQ5FYA8 562 aa6.67□□□□□ -1.34
PRKCB-206ENST00000482000 FBXW10Q5XX13 1052 aa6.67□□□□□ -1.34
PRKCB-206ENST00000482000 FAM214BQ7L5A3 538 aa6.67□□□□□ -1.34
PRKCB-206ENST00000482000 NLRC3Q7RTR2 1065 aa6.67□□□□□ -1.34
PRKCB-206ENST00000482000 LSRQ86X29 649 aaPredicted RBP6.67□□□□□ -1.34
PRKCB-206ENST00000482000 RIN3Q8TB24 985 aa6.67□□□□□ -1.34
PRKCB-206ENST00000482000 PPP1R13LQ8WUF5 828 aa6.67□□□□□ -1.34
PRKCB-206ENST00000482000 CPLX3Q8WVH0 158 aa6.67□□□□□ -1.34
PRKCB-206ENST00000482000 CRBNQ96SW2 442 aa6.67□□□□□ -1.34
PRKCB-206ENST00000482000 KNSTRNQ9Y448 316 aa6.67□□□□□ -1.34
PRKCB-206ENST00000482000 CD2APQ9Y5K6 639 aa6.67□□□□□ -1.34
PRKCB-206ENST00000482000 AFDNP55196 1824 aaKnown RBP6.66□□□□□ -1.34
PRKCB-206ENST00000482000 ARFGEF1Q9Y6D6 1849 aa6.66□□□□□ -1.34
PRKCB-206ENST00000482000 COL3A1P02461 1466 aaPredicted RBP6.66□□□□□ -1.34
PRKCB-206ENST00000482000 FAM170BA6NMN3 283 aa6.66□□□□□ -1.34
PRKCB-206ENST00000482000 TNFRSF10CO14798 259 aa6.66□□□□□ -1.34
PRKCB-206ENST00000482000 RGS13O14921 159 aa6.66□□□□□ -1.34
PRKCB-206ENST00000482000 SSBP05455 408 aaKnown RBP eCLIP6.66□□□□□ -1.34
PRKCB-206ENST00000482000 HSP90AB1P08238 724 aaKnown RBP6.66□□□□□ -1.34
PRKCB-206ENST00000482000 FAM87AP0C7U9 286 aa6.66□□□□□ -1.34
PRKCB-206ENST00000482000 AMOTQ4VCS5 1084 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms