RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 GSTA5Q7RTV2 222 aa12.68□□□□□ -0.38
DDX39B-219ENST00000481456 PNMA1Q8ND90 353 aa12.68□□□□□ -0.38
DDX39B-219ENST00000481456 MMS19Q96T76 1030 aa12.68□□□□□ -0.38
DDX39B-219ENST00000481456 DPH5Q9H2P9 285 aa12.68□□□□□ -0.38
DDX39B-219ENST00000481456 CCDC169A6NNP5 214 aa12.68□□□□□ -0.38
DDX39B-219ENST00000481456 N4BP1O75113 896 aaKnown RBP12.68□□□□□ -0.38
DDX39B-219ENST00000481456 CNOT10Q9H9A5 744 aaKnown RBP12.68□□□□□ -0.38
DDX39B-219ENST00000481456 SPOPO43791 374 aa12.67□□□□□ -0.38
DDX39B-219ENST00000481456 PRCPP42785 496 aa12.67□□□□□ -0.38
DDX39B-219ENST00000481456 ALX1Q15699 326 aa12.67□□□□□ -0.38
DDX39B-219ENST00000481456 PNKPQ96T60 521 aa12.67□□□□□ -0.38
DDX39B-219ENST00000481456 HOMER3Q9NSC5 361 aa12.67□□□□□ -0.38
DDX39B-219ENST00000481456 IKBKGQ9Y6K9 419 aa12.67□□□□□ -0.38
DDX39B-219ENST00000481456 CEP170BQ9Y4F5 1589 aaPredicted RBP12.67□□□□□ -0.38
DDX39B-219ENST00000481456 KDM3AQ9Y4C1 1321 aa12.67□□□□□ -0.38
DDX39B-219ENST00000481456 ZRANB2O95218 330 aaKnown RBP eCLIP12.67□□□□□ -0.386e-7■■■■■ 28.2
DDX39B-219ENST00000481456 CDC25AP30304 524 aa12.67□□□□□ -0.38
DDX39B-219ENST00000481456 CCDC174Q6PII3 467 aa12.67□□□□□ -0.38
DDX39B-219ENST00000481456 CEP128Q6ZU80 1094 aa12.67□□□□□ -0.38
DDX39B-219ENST00000481456 CCDC63Q8NA47 563 aa12.67□□□□□ -0.38
DDX39B-219ENST00000481456 TRIM49BA6NDI0 452 aa12.67□□□□□ -0.38
DDX39B-219ENST00000481456 U2AF1L4Q8WU68 220 aaKnown RBP12.67□□□□□ -0.38
DDX39B-219ENST00000481456 SPDYE3A6NKU9 549 aa12.67□□□□□ -0.38
DDX39B-219ENST00000481456 FXR1P51114 621 aaKnown RBP eCLIP12.67□□□□□ -0.38
DDX39B-219ENST00000481456 ANTXR2P58335 489 aa12.67□□□□□ -0.38
DDX39B-219ENST00000481456 SLC20A2Q08357 652 aa12.67□□□□□ -0.38
DDX39B-219ENST00000481456 USP37Q86T82 979 aa12.67□□□□□ -0.38
DDX39B-219ENST00000481456 PBKQ96KB5 322 aa12.67□□□□□ -0.38
DDX39B-219ENST00000481456 NDST4Q9H3R1 872 aa12.67□□□□□ -0.38
DDX39B-219ENST00000481456 BIN2Q9UBW5 565 aaPredicted RBP12.67□□□□□ -0.38
DDX39B-219ENST00000481456 SAP30BPQ9UHR5 308 aaKnown RBP12.67□□□□□ -0.38
DDX39B-219ENST00000481456 CAPN11Q9UMQ6 739 aa12.67□□□□□ -0.38
DDX39B-219ENST00000481456 HPS5Q9UPZ3 1129 aa12.67□□□□□ -0.38
DDX39B-219ENST00000481456 HPSEQ9Y251 543 aa12.67□□□□□ -0.38
DDX39B-219ENST00000481456 BZW2Q9Y6E2 419 aaKnown RBP12.67□□□□□ -0.38
DDX39B-219ENST00000481456 H3BQF6 201 aa12.66□□□□□ -0.38
DDX39B-219ENST00000481456 FTCDO95954 541 aa12.66□□□□□ -0.38
DDX39B-219ENST00000481456 SF3A3Q12874 501 aaKnown RBP eCLIP12.66□□□□□ -0.388e-18■■□□□ 13.5
DDX39B-219ENST00000481456 CUL1Q13616 776 aa12.66□□□□□ -0.38
DDX39B-219ENST00000481456 TSNAXIP1Q2TAA8 658 aa12.66□□□□□ -0.38
DDX39B-219ENST00000481456 NYXQ9GZU5 481 aa12.66□□□□□ -0.38
DDX39B-219ENST00000481456 CTTNBP2NLQ9P2B4 639 aa12.66□□□□□ -0.38
DDX39B-219ENST00000481456 JAG2Q9Y219 1238 aa12.66□□□□□ -0.38
DDX39B-219ENST00000481456 PGRMC1O00264 195 aaKnown RBP12.66□□□□□ -0.38
DDX39B-219ENST00000481456 PSMD14O00487 310 aa12.66□□□□□ -0.38
DDX39B-219ENST00000481456 SERPING1P05155 500 aa12.66□□□□□ -0.38
DDX39B-219ENST00000481456 CLTAP09496 248 aa12.66□□□□□ -0.38
DDX39B-219ENST00000481456 GCKP35557 465 aa12.66□□□□□ -0.38
DDX39B-219ENST00000481456 PAXIP1Q6ZW49 1069 aaPredicted RBP12.66□□□□□ -0.38
DDX39B-219ENST00000481456 VSIG1Q86XK7 387 aa12.66□□□□□ -0.38
DDX39B-219ENST00000481456 OSBPL9Q96SU4 736 aa12.66□□□□□ -0.38
DDX39B-219ENST00000481456 RIC8AQ9NPQ8 531 aa12.66□□□□□ -0.38
DDX39B-219ENST00000481456 RFX5P48382 616 aaPredicted RBP12.66□□□□□ -0.38
DDX39B-219ENST00000481456 ZBTB16Q05516 673 aa12.66□□□□□ -0.38
DDX39B-219ENST00000481456 PPFIBP2Q8ND30 876 aa12.66□□□□□ -0.38
DDX39B-219ENST00000481456 N4BP2L2Q92802 583 aaPredicted RBP12.66□□□□□ -0.38
DDX39B-219ENST00000481456 TBC1D31Q96DN5 1066 aa12.66□□□□□ -0.38
DDX39B-219ENST00000481456 NCAPGQ9BPX3 1015 aa12.66□□□□□ -0.38
DDX39B-219ENST00000481456 PANK4Q9NVE7 773 aa12.66□□□□□ -0.38
DDX39B-219ENST00000481456 TMOD2Q9NZR1 351 aa12.66□□□□□ -0.38
DDX39B-219ENST00000481456 PLAAQ9Y263 795 aa12.66□□□□□ -0.38
DDX39B-219ENST00000481456 STK24Q9Y6E0 443 aa12.66□□□□□ -0.38
DDX39B-219ENST00000481456 EIF3HO15372 352 aaKnown RBP eCLIP12.66□□□□□ -0.38
DDX39B-219ENST00000481456 XRCC5P13010 732 aaKnown RBP12.66□□□□□ -0.38
DDX39B-219ENST00000481456 HOXA7P31268 230 aaPredicted RBP12.66□□□□□ -0.38
DDX39B-219ENST00000481456 CCDC105Q8IYK2 499 aa12.66□□□□□ -0.38
DDX39B-219ENST00000481456 HDAC9Q9UKV0 1011 aa12.66□□□□□ -0.38
DDX39B-219ENST00000481456 GYPCP04921 128 aa12.65□□□□□ -0.38
DDX39B-219ENST00000481456 H2AFZP0C0S5 128 aa12.65□□□□□ -0.38
DDX39B-219ENST00000481456 DPYDQ12882 1025 aa12.65□□□□□ -0.38
DDX39B-219ENST00000481456 H2AFVQ71UI9 128 aa12.65□□□□□ -0.38
DDX39B-219ENST00000481456 RASGRP4Q8TDF6 673 aa12.65□□□□□ -0.38
DDX39B-219ENST00000481456 RAB3IPQ96QF0 476 aaPredicted RBP12.65□□□□□ -0.38
DDX39B-219ENST00000481456 GLT8D2Q9H1C3 349 aa12.65□□□□□ -0.38
DDX39B-219ENST00000481456 SUGCTQ9HAC7 445 aa12.65□□□□□ -0.38
DDX39B-219ENST00000481456 L1RE1Q9UN81 338 aa12.65□□□□□ -0.38
DDX39B-219ENST00000481456 PLEKHA8P1O95397 391 aa12.65□□□□□ -0.38
DDX39B-219ENST00000481456 MRPS25P82663 173 aaKnown RBP12.65□□□□□ -0.38
DDX39B-219ENST00000481456 WDR93Q6P2C0 686 aa12.65□□□□□ -0.38
DDX39B-219ENST00000481456 CCNI2Q6ZMN8 369 aaPredicted RBP12.65□□□□□ -0.38
DDX39B-219ENST00000481456 NOA1Q8NC60 698 aaKnown RBP12.65□□□□□ -0.38
DDX39B-219ENST00000481456 LARP4BQ92615 738 aaKnown RBP12.65□□□□□ -0.38
DDX39B-219ENST00000481456 SETDB2Q96T68 719 aa12.65□□□□□ -0.38
DDX39B-219ENST00000481456 NPHP4O75161 1426 aaPredicted RBP12.65□□□□□ -0.38
DDX39B-219ENST00000481456 SASH3O75995 380 aa12.65□□□□□ -0.38
DDX39B-219ENST00000481456 PTPAQ15257 358 aa12.65□□□□□ -0.38
DDX39B-219ENST00000481456 E2F5Q15329 346 aa12.65□□□□□ -0.38
DDX39B-219ENST00000481456 FAM26FQ5R3K3 315 aa12.65□□□□□ -0.38
DDX39B-219ENST00000481456 LRCH2Q5VUJ6 765 aa12.65□□□□□ -0.38
DDX39B-219ENST00000481456 LRRC31Q6UY01 552 aa12.65□□□□□ -0.38
DDX39B-219ENST00000481456 STK38LQ9Y2H1 464 aa12.65□□□□□ -0.38
DDX39B-219ENST00000481456 PICALMQ13492 652 aa12.65□□□□□ -0.38
DDX39B-219ENST00000481456 MICAL1Q8TDZ2 1067 aa12.65□□□□□ -0.38
DDX39B-219ENST00000481456 AGXT2Q9BYV1 514 aa12.65□□□□□ -0.38
DDX39B-219ENST00000481456 GPCPD1Q9NPB8 672 aa12.65□□□□□ -0.38
DDX39B-219ENST00000481456 A0A0G2JLW4 131 aa12.64□□□□□ -0.39
DDX39B-219ENST00000481456 PLCG1P19174 1290 aa12.64□□□□□ -0.39
DDX39B-219ENST00000481456 STAT1P42224 750 aa12.64□□□□□ -0.39
DDX39B-219ENST00000481456 TRAF1Q13077 416 aa12.64□□□□□ -0.39
DDX39B-219ENST00000481456 PTPROQ16827 1216 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms