RNA–Protein interactions for RNA: ENST00000481353.5

PDCD4-206, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 1,120 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-206ENST00000481353 MAPK8IP3Q9UPT6 1336 aa10.5□□□□□ -0.73
PDCD4-206ENST00000481353 TARBP1Q13395 1621 aaKnown RBP10.5□□□□□ -0.73
PDCD4-206ENST00000481353 PTPRGP23470 1445 aa10.5□□□□□ -0.73
PDCD4-206ENST00000481353 GPATCH8Q9UKJ3 1502 aaKnown RBP10.49□□□□□ -0.73
PDCD4-206ENST00000481353 ADAMTS12P58397 1594 aa10.49□□□□□ -0.73
PDCD4-206ENST00000481353 HOXC12P31275 282 aa10.49□□□□□ -0.73
PDCD4-206ENST00000481353 USP11P51784 963 aa10.49□□□□□ -0.73
PDCD4-206ENST00000481353 TMF1P82094 1093 aa10.49□□□□□ -0.73
PDCD4-206ENST00000481353 BRDTQ58F21 947 aaPredicted RBP10.49□□□□□ -0.73
PDCD4-206ENST00000481353 GTF2IRD2BQ6EKJ0 949 aa10.49□□□□□ -0.73
PDCD4-206ENST00000481353 CDPF1Q6NVV7 123 aa10.49□□□□□ -0.73
PDCD4-206ENST00000481353 CNNM4Q6P4Q7 775 aa10.49□□□□□ -0.73
PDCD4-206ENST00000481353 GTF2IRD2Q86UP8 949 aa10.49□□□□□ -0.73
PDCD4-206ENST00000481353 AHI1Q8N157 1196 aa10.49□□□□□ -0.73
PDCD4-206ENST00000481353 KCTD13Q8WZ19 329 aa10.49□□□□□ -0.73
PDCD4-206ENST00000481353 PRDM10Q9NQV6 1147 aa10.49□□□□□ -0.73
PDCD4-206ENST00000481353 FBXL21Q9UKT6 434 aa10.49□□□□□ -0.73
PDCD4-206ENST00000481353 NUP160Q12769 1436 aa10.49□□□□□ -0.73
PDCD4-206ENST00000481353 CEP170Q5SW79 1584 aa10.48□□□□□ -0.73
PDCD4-206ENST00000481353 PBRM1Q86U86 1689 aa10.48□□□□□ -0.73
PDCD4-206ENST00000481353 SART1O43290 800 aaKnown RBP10.48□□□□□ -0.73
PDCD4-206ENST00000481353 GAS2O43903 313 aaKnown RBP10.48□□□□□ -0.73
PDCD4-206ENST00000481353 KCNH1O95259 989 aa10.48□□□□□ -0.73
PDCD4-206ENST00000481353 NPTXRO95502 500 aa10.48□□□□□ -0.73
PDCD4-206ENST00000481353 SCG5P05408 212 aa10.48□□□□□ -0.73
PDCD4-206ENST00000481353 WWC2Q6AWC2 1192 aa10.48□□□□□ -0.73
PDCD4-206ENST00000481353 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.48□□□□□ -0.73
PDCD4-206ENST00000481353 BRAPQ7Z569 592 aa10.48□□□□□ -0.73
PDCD4-206ENST00000481353 JDP2Q8WYK2 163 aa10.48□□□□□ -0.73
PDCD4-206ENST00000481353 PTPRN2Q92932 1015 aa10.48□□□□□ -0.73
PDCD4-206ENST00000481353 FAM46AQ96IP4 442 aaKnown RBP10.48□□□□□ -0.73
PDCD4-206ENST00000481353 PRDM14Q9GZV8 571 aa10.48□□□□□ -0.73
PDCD4-206ENST00000481353 NDOR1Q9UHB4 597 aa10.48□□□□□ -0.73
PDCD4-206ENST00000481353 EYA4O95677 639 aa10.47□□□□□ -0.73
PDCD4-206ENST00000481353 HSP90AB2PQ58FF8 381 aa10.47□□□□□ -0.73
PDCD4-206ENST00000481353 SEZ6L2Q6UXD5 910 aa10.47□□□□□ -0.73
PDCD4-206ENST00000481353 FIBCD1Q8N539 461 aa10.47□□□□□ -0.73
PDCD4-206ENST00000481353 BRF1Q92994 677 aa10.47□□□□□ -0.73
PDCD4-206ENST00000481353 COX4I2Q96KJ9 171 aa10.47□□□□□ -0.73
PDCD4-206ENST00000481353 NOL6Q9H6R4 1146 aaKnown RBP10.47□□□□□ -0.73
PDCD4-206ENST00000481353 ISY1Q9ULR0 285 aaKnown RBP10.47□□□□□ -0.73
PDCD4-206ENST00000481353 NUP153P49790 1475 aaKnown RBP10.47□□□□□ -0.73
PDCD4-206ENST00000481353 CLASP1Q7Z460 1538 aa10.47□□□□□ -0.73
PDCD4-206ENST00000481353 KIAA0556O60303 1618 aa10.47□□□□□ -0.73
PDCD4-206ENST00000481353 EIF2AK4Q9P2K8 1649 aaKnown RBP10.47□□□□□ -0.73
PDCD4-206ENST00000481353 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.46□□□□□ -0.73
PDCD4-206ENST00000481353 ASLP04424 464 aa10.46□□□□□ -0.73
PDCD4-206ENST00000481353 NFICP08651 508 aa10.46□□□□□ -0.73
PDCD4-206ENST00000481353 CPEP16870 476 aa10.46□□□□□ -0.73
PDCD4-206ENST00000481353 CYP7A1P22680 504 aa10.46□□□□□ -0.73
PDCD4-206ENST00000481353 WDR43Q15061 677 aaKnown RBP eCLIP10.46□□□□□ -0.73
PDCD4-206ENST00000481353 SF1Q15637 639 aaKnown RBP10.46□□□□□ -0.73
PDCD4-206ENST00000481353 UVSSAQ2YD98 709 aa10.46□□□□□ -0.73
PDCD4-206ENST00000481353 DDX46Q7L014 1031 aaKnown RBP10.46□□□□□ -0.73
PDCD4-206ENST00000481353 MAMDC2Q7Z304 686 aaPredicted RBP10.46□□□□□ -0.73
PDCD4-206ENST00000481353 C1orf159Q96HA4 380 aa10.46□□□□□ -0.73
PDCD4-206ENST00000481353 UPF2Q9HAU5 1272 aaKnown RBP10.46□□□□□ -0.73
PDCD4-206ENST00000481353 CYP26B1Q9NR63 512 aa10.46□□□□□ -0.73
PDCD4-206ENST00000481353 PRAG1Q86YV5 1406 aa10.45□□□□□ -0.74
PDCD4-206ENST00000481353 NPC1L1Q9UHC9 1359 aa10.45□□□□□ -0.74
PDCD4-206ENST00000481353 CGNL1Q0VF96 1302 aa10.45□□□□□ -0.74
PDCD4-206ENST00000481353 ZNF644Q9H582 1327 aaPredicted RBP10.45□□□□□ -0.74
PDCD4-206ENST00000481353 CPP00450 1065 aa10.45□□□□□ -0.74
PDCD4-206ENST00000481353 FSTP19883 344 aa10.45□□□□□ -0.74
PDCD4-206ENST00000481353 SNW1Q13573 536 aaKnown RBP10.45□□□□□ -0.74
PDCD4-206ENST00000481353 NTRK3Q16288 839 aa10.45□□□□□ -0.74
PDCD4-206ENST00000481353 SLC35F1Q5T1Q4 408 aa10.45□□□□□ -0.74
PDCD4-206ENST00000481353 FGD2Q7Z6J4 655 aa10.45□□□□□ -0.74
PDCD4-206ENST00000481353 FAN1Q9Y2M0 1017 aa10.45□□□□□ -0.74
PDCD4-206ENST00000481353 SF3B6Q9Y3B4 125 aaKnown RBP10.45□□□□□ -0.74
PDCD4-206ENST00000481353 PLEKHD1A6NEE1 506 aa10.44□□□□□ -0.74
PDCD4-206ENST00000481353 EOMESO95936 686 aa10.44□□□□□ -0.74
PDCD4-206ENST00000481353 SNRPB2P08579 225 aaKnown RBP10.44□□□□□ -0.74
PDCD4-206ENST00000481353 PPP2R5DQ14738 602 aa10.44□□□□□ -0.74
PDCD4-206ENST00000481353 STRA8Q7Z7C7 330 aa10.44□□□□□ -0.74
PDCD4-206ENST00000481353 TMEM145Q8NBT3 493 aa10.44□□□□□ -0.74
PDCD4-206ENST00000481353 ATL2Q8NHH9 583 aa10.44□□□□□ -0.74
PDCD4-206ENST00000481353 FBLIM1Q8WUP2 373 aa10.44□□□□□ -0.74
PDCD4-206ENST00000481353 SCLYQ96I15 445 aa10.44□□□□□ -0.74
PDCD4-206ENST00000481353 GFOD1Q9NXC2 390 aa10.44□□□□□ -0.74
PDCD4-206ENST00000481353 THRAP3Q9Y2W1 955 aaKnown RBP10.44□□□□□ -0.74
PDCD4-206ENST00000481353 TNPO3Q9Y5L0 923 aaKnown RBP10.44□□□□□ -0.74
PDCD4-206ENST00000481353 EIF4G3O43432 1585 aaKnown RBP10.43□□□□□ -0.74
PDCD4-206ENST00000481353 ARHGEF5Q12774 1597 aa10.43□□□□□ -0.74
PDCD4-206ENST00000481353 C9orf84Q5VXU9 1444 aa10.43□□□□□ -0.74
PDCD4-206ENST00000481353 SCO2A0A1W2PP80 73 aa10.43□□□□□ -0.74
PDCD4-206ENST00000481353 DYNC1LI2O43237 492 aaPredicted RBP10.43□□□□□ -0.74
PDCD4-206ENST00000481353 IGFALSP35858 605 aa10.43□□□□□ -0.74
PDCD4-206ENST00000481353 AMPD2Q01433 879 aa10.43□□□□□ -0.74
PDCD4-206ENST00000481353 DHCR24Q15392 516 aa10.43□□□□□ -0.74
PDCD4-206ENST00000481353 SGO2Q562F6 1265 aa10.43□□□□□ -0.74
PDCD4-206ENST00000481353 DUSP27Q5VZP5 1158 aa10.43□□□□□ -0.74
PDCD4-206ENST00000481353 TRMT2AQ8IZ69 625 aaKnown RBP10.43□□□□□ -0.74
PDCD4-206ENST00000481353 CHMP4AQ9BY43 222 aa10.43□□□□□ -0.74
PDCD4-206ENST00000481353 TRPM1Q7Z4N2 1603 aa10.43□□□□□ -0.74
PDCD4-206ENST00000481353 DISP1Q96F81 1524 aa10.43□□□□□ -0.74
PDCD4-206ENST00000481353 CARMIL2Q6F5E8 1435 aa10.42□□□□□ -0.74
PDCD4-206ENST00000481353 ZNF521Q96K83 1311 aa10.42□□□□□ -0.74
PDCD4-206ENST00000481353 HMX2A2RU54 273 aa10.42□□□□□ -0.74
PDCD4-206ENST00000481353 BLACEA4D250 179 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms