RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 FMNL2Q96PY5 1086 aa9.51□□□□□ -0.89
LSM5-210ENST00000480956 BHLHE41Q9C0J9 482 aaPredicted RBP9.51□□□□□ -0.89
LSM5-210ENST00000480956 PRKRIP1Q9H875 184 aaPredicted RBP9.51□□□□□ -0.89
LSM5-210ENST00000480956 EMC7Q9NPA0 242 aa9.51□□□□□ -0.89
LSM5-210ENST00000480956 C14orf119Q9NWQ9 140 aa9.51□□□□□ -0.89
LSM5-210ENST00000480956 ARHGAP28Q9P2N2 729 aa9.51□□□□□ -0.89
LSM5-210ENST00000480956 PCDHGB6Q9Y5F9 930 aa9.51□□□□□ -0.89
LSM5-210ENST00000480956 PTGIRP43119 386 aa9.51□□□□□ -0.89
LSM5-210ENST00000480956 PTPN11Q06124 597 aaPredicted RBP9.51□□□□□ -0.89
LSM5-210ENST00000480956 WASHC5Q12768 1159 aa9.51□□□□□ -0.89
LSM5-210ENST00000480956 LLGL1Q15334 1064 aa9.51□□□□□ -0.89
LSM5-210ENST00000480956 ASAP3Q8TDY4 903 aa9.51□□□□□ -0.89
LSM5-210ENST00000480956 PTPRN2Q92932 1015 aa9.51□□□□□ -0.89
LSM5-210ENST00000480956 ZNF496Q96IT1 587 aaPredicted RBP9.51□□□□□ -0.89
LSM5-210ENST00000480956 HELLSQ9NRZ9 838 aa9.51□□□□□ -0.89
LSM5-210ENST00000480956 INVSQ9Y283 1065 aa9.51□□□□□ -0.89
LSM5-210ENST00000480956 CRYL1Q9Y2S2 319 aa9.51□□□□□ -0.89
LSM5-210ENST00000480956 SLC22A31A6NKX4 558 aa9.5□□□□□ -0.89
LSM5-210ENST00000480956 FAM155AB1AL88 458 aaPredicted RBP9.5□□□□□ -0.89
LSM5-210ENST00000480956 GAS7O60861 476 aa9.5□□□□□ -0.89
LSM5-210ENST00000480956 APPP05067 770 aa9.5□□□□□ -0.89
LSM5-210ENST00000480956 HNRNPCP07910 306 aaKnown RBP eCLIP9.5□□□□□ -0.89
LSM5-210ENST00000480956 AKAP5P24588 427 aa9.5□□□□□ -0.89
LSM5-210ENST00000480956 CYP26C1Q6V0L0 522 aa9.5□□□□□ -0.89
LSM5-210ENST00000480956 C11orf74Q86VG3 221 aa9.5□□□□□ -0.89
LSM5-210ENST00000480956 ZBTB34Q8NCN2 500 aa9.5□□□□□ -0.89
LSM5-210ENST00000480956 ACO2Q99798 780 aaKnown RBP9.5□□□□□ -0.89
LSM5-210ENST00000480956 NUDT16L1Q9BRJ7 211 aaKnown RBP9.5□□□□□ -0.89
LSM5-210ENST00000480956 VPS11Q9H270 941 aa9.5□□□□□ -0.89
LSM5-210ENST00000480956 REV1Q9UBZ9 1251 aa9.5□□□□□ -0.89
LSM5-210ENST00000480956 MAGED1Q9Y5V3 778 aaPredicted RBP9.5□□□□□ -0.89
LSM5-210ENST00000480956 RRN3P2A6NIE6 340 aa9.49□□□□□ -0.89
LSM5-210ENST00000480956 PCDHGA12O60330 932 aa9.49□□□□□ -0.89
LSM5-210ENST00000480956 MMP20O60882 483 aa9.49□□□□□ -0.89
LSM5-210ENST00000480956 SASH3O75995 380 aa9.49□□□□□ -0.89
LSM5-210ENST00000480956 LSSP48449 732 aa9.49□□□□□ -0.89
LSM5-210ENST00000480956 DSG1Q02413 1049 aa9.49□□□□□ -0.89
LSM5-210ENST00000480956 ZNF252P-AS1Q0IIN9 211 aa9.49□□□□□ -0.89
LSM5-210ENST00000480956 CDCP2Q5VXM1 449 aa9.49□□□□□ -0.89
LSM5-210ENST00000480956 FASTKD5Q7L8L6 764 aaKnown RBP9.49□□□□□ -0.89
LSM5-210ENST00000480956 GALNT5Q7Z7M9 940 aa9.49□□□□□ -0.89
LSM5-210ENST00000480956 NBPF11Q86T75 865 aa9.49□□□□□ -0.89
LSM5-210ENST00000480956 OR2C3Q8N628 320 aa9.49□□□□□ -0.89
LSM5-210ENST00000480956 HHIPQ96QV1 700 aa9.49□□□□□ -0.89
LSM5-210ENST00000480956 SMOC1Q9H4F8 434 aa9.49□□□□□ -0.89
LSM5-210ENST00000480956 SAMD15Q9P1V8 674 aa9.49□□□□□ -0.89
LSM5-210ENST00000480956 PCDHGA9Q9Y5G4 932 aaKnown RBP9.49□□□□□ -0.89
LSM5-210ENST00000480956 PCDHGA8Q9Y5G5 932 aa9.49□□□□□ -0.89
LSM5-210ENST00000480956 PCDHGA7Q9Y5G6 932 aa9.49□□□□□ -0.89
LSM5-210ENST00000480956 PCDHGA6Q9Y5G7 932 aa9.49□□□□□ -0.89
LSM5-210ENST00000480956 PCDHGA3Q9Y5H0 932 aa9.49□□□□□ -0.89
LSM5-210ENST00000480956 PCDHGA2Q9Y5H1 932 aa9.49□□□□□ -0.89
LSM5-210ENST00000480956 PABPN1LA6NDY0 278 aaKnown RBP9.48□□□□□ -0.89
LSM5-210ENST00000480956 RAG1P15918 1043 aa9.48□□□□□ -0.89
LSM5-210ENST00000480956 KRT20P35900 424 aa9.48□□□□□ -0.89
LSM5-210ENST00000480956 IL6STP40189 918 aaPredicted RBP9.48□□□□□ -0.89
LSM5-210ENST00000480956 ROR1Q01973 937 aa9.48□□□□□ -0.89
LSM5-210ENST00000480956 SFSWAPQ12872 951 aaKnown RBP9.48□□□□□ -0.89
LSM5-210ENST00000480956 NNTQ13423 1086 aa9.48□□□□□ -0.89
LSM5-210ENST00000480956 LAPTM4AQ15012 233 aa9.48□□□□□ -0.89
LSM5-210ENST00000480956 KIAA0753Q2KHM9 967 aa9.48□□□□□ -0.89
LSM5-210ENST00000480956 UBXN10Q96LJ8 280 aa9.48□□□□□ -0.89
LSM5-210ENST00000480956 RIPOR3Q96MK2 946 aa9.48□□□□□ -0.89
LSM5-210ENST00000480956 EMILIN2Q9BXX0 1053 aa9.48□□□□□ -0.89
LSM5-210ENST00000480956 FAM86C1Q9NVL1 165 aa9.48□□□□□ -0.89
LSM5-210ENST00000480956 RTEL1Q9NZ71 1219 aa9.48□□□□□ -0.89
LSM5-210ENST00000480956 KLHL33A6NCF5 533 aa9.48□□□□□ -0.89
LSM5-210ENST00000480956 EYA2O00167 538 aa9.48□□□□□ -0.89
LSM5-210ENST00000480956 DGAT1O75907 488 aa9.48□□□□□ -0.89
LSM5-210ENST00000480956 RPS6KB1P23443 525 aa9.48□□□□□ -0.89
LSM5-210ENST00000480956 PFKPQ01813 784 aa9.48□□□□□ -0.89
LSM5-210ENST00000480956 OCRLQ01968 901 aa9.48□□□□□ -0.89
LSM5-210ENST00000480956 SLC27A3Q5K4L6 730 aa9.48□□□□□ -0.89
LSM5-210ENST00000480956 SWSAP1Q6NVH7 229 aa9.48□□□□□ -0.89
LSM5-210ENST00000480956 DDX53Q86TM3 631 aaKnown RBP9.48□□□□□ -0.89
LSM5-210ENST00000480956 STK35Q8TDR2 534 aa9.48□□□□□ -0.89
LSM5-210ENST00000480956 TBC1D20Q96BZ9 403 aa9.48□□□□□ -0.89
LSM5-210ENST00000480956 PNMA5Q96PV4 448 aa9.48□□□□□ -0.89
LSM5-210ENST00000480956 SUSD2Q9UGT4 822 aa9.48□□□□□ -0.89
LSM5-210ENST00000480956 FEZ2Q9UHY8 353 aaPredicted RBP9.48□□□□□ -0.89
LSM5-210ENST00000480956 CEP131Q9UPN4 1083 aa9.48□□□□□ -0.89
LSM5-210ENST00000480956 CORINQ9Y5Q5 1042 aa9.48□□□□□ -0.89
LSM5-210ENST00000480956 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.47□□□□□ -0.89
LSM5-210ENST00000480956 TOR1BO14657 336 aa9.47□□□□□ -0.89
LSM5-210ENST00000480956 ST8SIA5O15466 376 aa9.47□□□□□ -0.89
LSM5-210ENST00000480956 PLOD3O60568 738 aa9.47□□□□□ -0.89
LSM5-210ENST00000480956 MAFKO60675 156 aa9.47□□□□□ -0.89
LSM5-210ENST00000480956 EPHX1P07099 455 aa9.47□□□□□ -0.89
LSM5-210ENST00000480956 GLULP15104 373 aa9.47□□□□□ -0.89
LSM5-210ENST00000480956 ARNTP27540 789 aa9.47□□□□□ -0.89
LSM5-210ENST00000480956 SMARCA1P28370 1054 aa9.47□□□□□ -0.89
LSM5-210ENST00000480956 PPM1AP35813 382 aa9.47□□□□□ -0.89
LSM5-210ENST00000480956 UBA7P41226 1012 aa9.47□□□□□ -0.89
LSM5-210ENST00000480956 SESN3P58005 492 aa9.47□□□□□ -0.89
LSM5-210ENST00000480956 SEMA5AQ13591 1074 aa9.47□□□□□ -0.89
LSM5-210ENST00000480956 CCDC38Q502W7 563 aa9.47□□□□□ -0.89
LSM5-210ENST00000480956 ARSJQ5FYB0 599 aaPredicted RBP9.47□□□□□ -0.89
LSM5-210ENST00000480956 SCARA3Q6AZY7 606 aa9.47□□□□□ -0.89
LSM5-210ENST00000480956 SPOCD1Q6ZMY3 1216 aa9.47□□□□□ -0.89
LSM5-210ENST00000480956 BRINP3Q76B58 766 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms