RNA–Protein interactions for RNA: ENST00000480598.1

LIMS4-202, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-202ENST00000480598 NKX3-2P78367 333 aa17.39■□□□□ 0.37
LIMS4-202ENST00000480598 QRICH1Q2TAL8 776 aa17.39■□□□□ 0.37
LIMS4-202ENST00000480598 LRIT3Q3SXY7 679 aa17.39■□□□□ 0.37
LIMS4-202ENST00000480598 IQSEC1Q6DN90 963 aa17.39■□□□□ 0.37
LIMS4-202ENST00000480598 KIAA1211Q6ZU35 1233 aa17.39■□□□□ 0.37
LIMS4-202ENST00000480598 CHST3Q7LGC8 479 aa17.39■□□□□ 0.37
LIMS4-202ENST00000480598 TBC1D5Q92609 795 aa17.39■□□□□ 0.37
LIMS4-202ENST00000480598 MAP4K1Q92918 833 aa17.39■□□□□ 0.37
LIMS4-202ENST00000480598 VTI1AQ96AJ9 217 aa17.39■□□□□ 0.37
LIMS4-202ENST00000480598 JMJD4Q9H9V9 463 aa17.39■□□□□ 0.37
LIMS4-202ENST00000480598 RBM8AQ9Y5S9 174 aaKnown RBP17.39■□□□□ 0.37
LIMS4-202ENST00000480598 MYH6P13533 1939 aa17.39■□□□□ 0.37
LIMS4-202ENST00000480598 IFIT3O14879 490 aaKnown RBP17.38■□□□□ 0.37
LIMS4-202ENST00000480598 FAAP100Q0VG06 881 aa17.38■□□□□ 0.37
LIMS4-202ENST00000480598 FSCN1Q16658 493 aaKnown RBP17.38■□□□□ 0.37
LIMS4-202ENST00000480598 ANKRD33Q7Z3H0 272 aa17.38■□□□□ 0.37
LIMS4-202ENST00000480598 RALYLQ86SE5 291 aaKnown RBP17.38■□□□□ 0.37
LIMS4-202ENST00000480598 NCOA7Q8NI08 942 aa17.38■□□□□ 0.37
LIMS4-202ENST00000480598 AP5M1Q9H0R1 490 aa17.38■□□□□ 0.37
LIMS4-202ENST00000480598 MAD2L2Q9UI95 211 aa17.38■□□□□ 0.37
LIMS4-202ENST00000480598 ELP1O95163 1332 aa17.38■□□□□ 0.37
LIMS4-202ENST00000480598 ABCB11O95342 1321 aa17.38■□□□□ 0.37
LIMS4-202ENST00000480598 LOC102724159A0A0B4J2E5 919 aa17.37■□□□□ 0.37
LIMS4-202ENST00000480598 KIAA0355O15063 1070 aa17.37■□□□□ 0.37
LIMS4-202ENST00000480598 PWP2Q15269 919 aaKnown RBP17.37■□□□□ 0.37
LIMS4-202ENST00000480598 CXCL17Q6UXB2 119 aa17.37■□□□□ 0.37
LIMS4-202ENST00000480598 FBXO11Q86XK2 927 aa17.37■□□□□ 0.37
LIMS4-202ENST00000480598 TOX2Q96NM4 488 aa17.37■□□□□ 0.37
LIMS4-202ENST00000480598 TMEM39AQ9NV64 488 aa17.37■□□□□ 0.37
LIMS4-202ENST00000480598 LAMA2P24043 3122 aaKnown RBP17.36■□□□□ 0.37
LIMS4-202ENST00000480598 A0A0U1RQG5 324 aaPredicted RBP17.36■□□□□ 0.37
LIMS4-202ENST00000480598 PALM3A6NDB9 673 aaPredicted RBP17.36■□□□□ 0.37
LIMS4-202ENST00000480598 DCDC2CA8MYV0 355 aa17.36■□□□□ 0.37
LIMS4-202ENST00000480598 KLRF2D3W0D1 207 aa17.36■□□□□ 0.37
LIMS4-202ENST00000480598 ARVCFO00192 962 aa17.36■□□□□ 0.37
LIMS4-202ENST00000480598 EDNRBP24530 442 aa17.36■□□□□ 0.37
LIMS4-202ENST00000480598 CDK7P50613 346 aa17.36■□□□□ 0.37
LIMS4-202ENST00000480598 ANTXR2P58335 489 aa17.36■□□□□ 0.37
LIMS4-202ENST00000480598 PDE4DQ08499 809 aa17.36■□□□□ 0.37
LIMS4-202ENST00000480598 SLC35G1Q2M3R5 365 aa17.36■□□□□ 0.37
LIMS4-202ENST00000480598 DUSP28Q4G0W2 176 aa17.36■□□□□ 0.37
LIMS4-202ENST00000480598 C9orf50Q5SZB4 431 aa17.36■□□□□ 0.37
LIMS4-202ENST00000480598 CENPQQ7L2Z9 268 aaPredicted RBP17.36■□□□□ 0.37
LIMS4-202ENST00000480598 RGS22Q8NE09 1264 aa17.36■□□□□ 0.37
LIMS4-202ENST00000480598 DNERQ8NFT8 737 aa17.36■□□□□ 0.37
LIMS4-202ENST00000480598 ESYT1Q9BSJ8 1104 aa17.36■□□□□ 0.37
LIMS4-202ENST00000480598 WDR11Q9BZH6 1224 aa17.36■□□□□ 0.37
LIMS4-202ENST00000480598 LSG1Q9H089 658 aaKnown RBP17.36■□□□□ 0.37
LIMS4-202ENST00000480598 COL20A1Q9P218 1284 aa17.36■□□□□ 0.37
LIMS4-202ENST00000480598 ERICH2A1L162 156 aa17.35■□□□□ 0.37
LIMS4-202ENST00000480598 RAG1P15918 1043 aa17.35■□□□□ 0.37
LIMS4-202ENST00000480598 GRM4Q14833 912 aa17.35■□□□□ 0.37
LIMS4-202ENST00000480598 WTAPQ15007 396 aa17.35■□□□□ 0.37
LIMS4-202ENST00000480598 SHHQ15465 462 aa17.35■□□□□ 0.37
LIMS4-202ENST00000480598 MB21D2Q8IYB1 491 aaPredicted RBP17.35■□□□□ 0.37
LIMS4-202ENST00000480598 SYTL5Q8TDW5 730 aaPredicted RBP17.35■□□□□ 0.37
LIMS4-202ENST00000480598 TAAR1Q96RJ0 339 aa17.35■□□□□ 0.37
LIMS4-202ENST00000480598 MRPL11Q9Y3B7 192 aaKnown RBP17.35■□□□□ 0.37
LIMS4-202ENST00000480598 Q9Y3F1 56 aa17.35■□□□□ 0.37
LIMS4-202ENST00000480598 RBM47A0AV96 593 aaKnown RBP17.34■□□□□ 0.37
LIMS4-202ENST00000480598 PPP1R11O60927 126 aaPredicted RBP17.34■□□□□ 0.37
LIMS4-202ENST00000480598 EPHB4P54760 987 aa17.34■□□□□ 0.37
LIMS4-202ENST00000480598 SART3Q15020 963 aaKnown RBP17.34■□□□□ 0.37
LIMS4-202ENST00000480598 TMEM67Q5HYA8 995 aa17.34■□□□□ 0.37
LIMS4-202ENST00000480598 MROH7Q68CQ1 1323 aa17.34■□□□□ 0.37
LIMS4-202ENST00000480598 Q7L0L9 218 aa17.34■□□□□ 0.37
LIMS4-202ENST00000480598 FAM126BQ8IXS8 530 aa17.34■□□□□ 0.37
LIMS4-202ENST00000480598 MTMR8Q96EF0 704 aa17.34■□□□□ 0.37
LIMS4-202ENST00000480598 MPHOSPH6Q99547 160 aaKnown RBP17.34■□□□□ 0.37
LIMS4-202ENST00000480598 GPHNQ9NQX3 736 aaPredicted RBP17.34■□□□□ 0.37
LIMS4-202ENST00000480598 BAZ2BQ9UIF8 2168 aaKnown RBP17.34■□□□□ 0.37
LIMS4-202ENST00000480598 TBX21Q9UL17 535 aa17.34■□□□□ 0.37
LIMS4-202ENST00000480598 GRIN2DO15399 1336 aa17.33■□□□□ 0.36
LIMS4-202ENST00000480598 ZEB2O60315 1214 aa17.33■□□□□ 0.36
LIMS4-202ENST00000480598 TROAPQ12815 778 aa17.33■□□□□ 0.36
LIMS4-202ENST00000480598 COL9A3Q14050 684 aaPredicted RBP17.33■□□□□ 0.36
LIMS4-202ENST00000480598 HOMER1Q86YM7 354 aa17.33■□□□□ 0.36
LIMS4-202ENST00000480598 MCF2L2Q86YR7 1114 aa17.33■□□□□ 0.36
LIMS4-202ENST00000480598 OR6J1Q8NGC5 347 aa17.33■□□□□ 0.36
LIMS4-202ENST00000480598 IGDCC4Q8TDY8 1250 aa17.33■□□□□ 0.36
LIMS4-202ENST00000480598 COPS5Q92905 334 aa17.33■□□□□ 0.36
LIMS4-202ENST00000480598 AMNQ9BXJ7 453 aa17.33■□□□□ 0.36
LIMS4-202ENST00000480598 OPLAHO14841 1288 aa17.32■□□□□ 0.36
LIMS4-202ENST00000480598 SLC27A2O14975 620 aa17.32■□□□□ 0.36
LIMS4-202ENST00000480598 ZBTB5O15062 677 aa17.32■□□□□ 0.36
LIMS4-202ENST00000480598 CYTH3O43739 400 aa17.32■□□□□ 0.36
LIMS4-202ENST00000480598 CABYRO75952 493 aa17.32■□□□□ 0.36
LIMS4-202ENST00000480598 ARIH2O95376 493 aa17.32■□□□□ 0.36
LIMS4-202ENST00000480598 CFBP00751 764 aa17.32■□□□□ 0.36
LIMS4-202ENST00000480598 PSMC6P62333 389 aa17.32■□□□□ 0.36
LIMS4-202ENST00000480598 ITGA7Q13683 1181 aa17.32■□□□□ 0.36
LIMS4-202ENST00000480598 PPP2R5BQ15173 497 aa17.32■□□□□ 0.36
LIMS4-202ENST00000480598 BMP2KLQ5H9B9 411 aa17.32■□□□□ 0.36
LIMS4-202ENST00000480598 SLC43A3Q8NBI5 491 aa17.32■□□□□ 0.36
LIMS4-202ENST00000480598 SCFD2Q8WU76 684 aa17.32■□□□□ 0.36
LIMS4-202ENST00000480598 PIGSQ96S52 555 aa17.32■□□□□ 0.36
LIMS4-202ENST00000480598 RMDN3Q96TC7 470 aa17.32■□□□□ 0.36
LIMS4-202ENST00000480598 RIOX1Q9H6W3 641 aa17.32■□□□□ 0.36
LIMS4-202ENST00000480598 ANO2Q9NQ90 1003 aa17.32■□□□□ 0.36
LIMS4-202ENST00000480598 B4DLN1 442 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms