RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 STARD7Q9NQZ5 370 aa17.5■□□□□ 0.39
TDP2-205ENST00000480495 GNEQ9Y223 722 aaKnown RBP17.5■□□□□ 0.39
TDP2-205ENST00000480495 MRPL11Q9Y3B7 192 aaKnown RBP17.5■□□□□ 0.39
TDP2-205ENST00000480495 MCM3APO60318 1980 aa17.49■□□□□ 0.39
TDP2-205ENST00000480495 ASGR1P07306 291 aa17.49■□□□□ 0.39
TDP2-205ENST00000480495 MDM2Q00987 491 aaPredicted RBP17.49■□□□□ 0.39
TDP2-205ENST00000480495 GRM4Q14833 912 aa17.49■□□□□ 0.39
TDP2-205ENST00000480495 TLK2Q86UE8 772 aa17.49■□□□□ 0.39
TDP2-205ENST00000480495 MTMR8Q96EF0 704 aa17.49■□□□□ 0.39
TDP2-205ENST00000480495 CCDC136Q96JN2 1154 aa17.49■□□□□ 0.39
TDP2-205ENST00000480495 TOX2Q96NM4 488 aa17.49■□□□□ 0.39
TDP2-205ENST00000480495 ANO2Q9NQ90 1003 aa17.49■□□□□ 0.39
TDP2-205ENST00000480495 PDLIM7Q9NR12 457 aa17.49■□□□□ 0.39
TDP2-205ENST00000480495 PDGFCQ9NRA1 345 aa17.49■□□□□ 0.39
TDP2-205ENST00000480495 DDX49Q9Y6V7 483 aaKnown RBP17.49■□□□□ 0.39
TDP2-205ENST00000480495 DNAH12Q6ZR08 3092 aa17.49■□□□□ 0.39
TDP2-205ENST00000480495 CTAGE5O15320 804 aa17.48■□□□□ 0.39
TDP2-205ENST00000480495 SMPD1P17405 629 aa17.48■□□□□ 0.39
TDP2-205ENST00000480495 EDNRBP24530 442 aa17.48■□□□□ 0.39
TDP2-205ENST00000480495 ANTXR2P58335 489 aa17.48■□□□□ 0.39
TDP2-205ENST00000480495 PDE4DQ08499 809 aa17.48■□□□□ 0.39
TDP2-205ENST00000480495 TROAPQ12815 778 aa17.48■□□□□ 0.39
TDP2-205ENST00000480495 TRAF1Q13077 416 aa17.48■□□□□ 0.39
TDP2-205ENST00000480495 CASC1Q6TDU7 716 aa17.48■□□□□ 0.39
TDP2-205ENST00000480495 CHST3Q7LGC8 479 aa17.48■□□□□ 0.39
TDP2-205ENST00000480495 ANKRD33Q7Z3H0 272 aa17.48■□□□□ 0.39
TDP2-205ENST00000480495 CATIPQ7Z7H3 387 aa17.48■□□□□ 0.39
TDP2-205ENST00000480495 SKAP1Q86WV1 359 aa17.48■□□□□ 0.39
TDP2-205ENST00000480495 TDHQ8IZJ6 230 aa17.48■□□□□ 0.39
TDP2-205ENST00000480495 IGDCC4Q8TDY8 1250 aa17.48■□□□□ 0.39
TDP2-205ENST00000480495 AMNQ9BXJ7 453 aa17.48■□□□□ 0.39
TDP2-205ENST00000480495 PRDM5Q9NQX1 630 aaPredicted RBP17.48■□□□□ 0.39
TDP2-205ENST00000480495 RANBP2P49792 3224 aaKnown RBP17.48■□□□□ 0.39
TDP2-205ENST00000480495 RBM47A0AV96 593 aaKnown RBP17.47■□□□□ 0.39
TDP2-205ENST00000480495 SLC27A2O14975 620 aa17.47■□□□□ 0.39
TDP2-205ENST00000480495 ZBTB5O15062 677 aa17.47■□□□□ 0.39
TDP2-205ENST00000480495 DYNC1LI2O43237 492 aaPredicted RBP17.47■□□□□ 0.39
TDP2-205ENST00000480495 ZEB2O60315 1214 aa17.47■□□□□ 0.39
TDP2-205ENST00000480495 CLTBP09497 229 aa17.47■□□□□ 0.39
TDP2-205ENST00000480495 MCM5P33992 734 aa17.47■□□□□ 0.39
TDP2-205ENST00000480495 IRX5P78411 483 aaPredicted RBP17.47■□□□□ 0.39
TDP2-205ENST00000480495 NECTIN1Q15223 517 aa17.47■□□□□ 0.39
TDP2-205ENST00000480495 FSCN1Q16658 493 aaKnown RBP17.47■□□□□ 0.39
TDP2-205ENST00000480495 DUSP28Q4G0W2 176 aa17.47■□□□□ 0.39
TDP2-205ENST00000480495 CREB3L3Q68CJ9 461 aa17.47■□□□□ 0.39
TDP2-205ENST00000480495 VTI1AQ96AJ9 217 aa17.47■□□□□ 0.39
TDP2-205ENST00000480495 MAP3K14Q99558 947 aa17.47■□□□□ 0.39
TDP2-205ENST00000480495 SENP2Q9HC62 589 aa17.47■□□□□ 0.39
TDP2-205ENST00000480495 LCTP09848 1927 aa17.47■□□□□ 0.39
TDP2-205ENST00000480495 LRRC37A2A6NM11 1700 aa17.47■□□□□ 0.39
TDP2-205ENST00000480495 MROH7Q68CQ1 1323 aa17.47■□□□□ 0.39
TDP2-205ENST00000480495 A0A0U1RQG5 324 aaPredicted RBP17.46■□□□□ 0.39
TDP2-205ENST00000480495 DCDC2CA8MYV0 355 aa17.46■□□□□ 0.39
TDP2-205ENST00000480495 PQBP1O60828 265 aaKnown RBP17.46■□□□□ 0.39
TDP2-205ENST00000480495 CABYRO75952 493 aa17.46■□□□□ 0.39
TDP2-205ENST00000480495 BEX3Q00994 111 aa17.46■□□□□ 0.39
TDP2-205ENST00000480495 LRIT3Q3SXY7 679 aa17.46■□□□□ 0.39
TDP2-205ENST00000480495 TMTC2Q8N394 836 aa17.46■□□□□ 0.39
TDP2-205ENST00000480495 SAMD3Q8N6K7 520 aa17.46■□□□□ 0.39
TDP2-205ENST00000480495 SYTL5Q8TDW5 730 aaPredicted RBP17.46■□□□□ 0.39
TDP2-205ENST00000480495 TMEM87BQ96K49 555 aa17.46■□□□□ 0.39
TDP2-205ENST00000480495 WDR11Q9BZH6 1224 aa17.46■□□□□ 0.39
TDP2-205ENST00000480495 RIOX1Q9H6W3 641 aa17.46■□□□□ 0.39
TDP2-205ENST00000480495 TRIM43BA6NCK2 446 aa17.45■□□□□ 0.38
TDP2-205ENST00000480495 NKRFO15226 690 aaKnown RBP eCLIP17.45■□□□□ 0.38
TDP2-205ENST00000480495 PRC1O43663 620 aa17.45■□□□□ 0.38
TDP2-205ENST00000480495 CDC45O75419 566 aa17.45■□□□□ 0.38
TDP2-205ENST00000480495 CDK7P50613 346 aa17.45■□□□□ 0.38
TDP2-205ENST00000480495 RNF20Q5VTR2 975 aa17.45■□□□□ 0.38
TDP2-205ENST00000480495 SH3RF1Q7Z6J0 888 aa17.45■□□□□ 0.38
TDP2-205ENST00000480495 NSUN6Q8TEA1 469 aaKnown RBP17.45■□□□□ 0.38
TDP2-205ENST00000480495 SCFD2Q8WU76 684 aa17.45■□□□□ 0.38
TDP2-205ENST00000480495 TBC1D5Q92609 795 aa17.45■□□□□ 0.38
TDP2-205ENST00000480495 TRIM43Q96BQ3 446 aaPredicted RBP17.45■□□□□ 0.38
TDP2-205ENST00000480495 IWS1Q96ST2 819 aa17.45■□□□□ 0.38
TDP2-205ENST00000480495 SEZ6LQ9BYH1 1024 aa17.45■□□□□ 0.38
TDP2-205ENST00000480495 LY9Q9HBG7 655 aa17.45■□□□□ 0.38
TDP2-205ENST00000480495 MAP3K20Q9NYL2 800 aaKnown RBP17.45■□□□□ 0.38
TDP2-205ENST00000480495 PCDHA1Q9Y5I3 950 aa17.45■□□□□ 0.38
TDP2-205ENST00000480495 ARVCFO00192 962 aa17.44■□□□□ 0.38
TDP2-205ENST00000480495 KIAA0355O15063 1070 aa17.44■□□□□ 0.38
TDP2-205ENST00000480495 DDAH1O94760 285 aa17.44■□□□□ 0.38
TDP2-205ENST00000480495 KIF5BP33176 963 aa17.44■□□□□ 0.38
TDP2-205ENST00000480495 GHRHRQ02643 423 aa17.44■□□□□ 0.38
TDP2-205ENST00000480495 FAAP100Q0VG06 881 aa17.44■□□□□ 0.38
TDP2-205ENST00000480495 ZNF654Q8IZM8 581 aa17.44■□□□□ 0.38
TDP2-205ENST00000480495 TAAR1Q96RJ0 339 aa17.44■□□□□ 0.38
TDP2-205ENST00000480495 TMEM39AQ9NV64 488 aa17.44■□□□□ 0.38
TDP2-205ENST00000480495 PCDH10Q9P2E7 1040 aa17.44■□□□□ 0.38
TDP2-205ENST00000480495 PNMA6FA0A0J9YX94 578 aa17.43■□□□□ 0.38
TDP2-205ENST00000480495 PPP1R11O60927 126 aaPredicted RBP17.43■□□□□ 0.38
TDP2-205ENST00000480495 CFBP00751 764 aa17.43■□□□□ 0.38
TDP2-205ENST00000480495 NEFLP07196 543 aa17.43■□□□□ 0.38
TDP2-205ENST00000480495 LIFRP42702 1097 aa17.43■□□□□ 0.38
TDP2-205ENST00000480495 HSD17B4P51659 736 aa17.43■□□□□ 0.38
TDP2-205ENST00000480495 PPP2R5BQ15173 497 aa17.43■□□□□ 0.38
TDP2-205ENST00000480495 SLC35G1Q2M3R5 365 aa17.43■□□□□ 0.38
TDP2-205ENST00000480495 TMEM63BQ5T3F8 832 aa17.43■□□□□ 0.38
TDP2-205ENST00000480495 HOMER1Q86YM7 354 aa17.43■□□□□ 0.38
TDP2-205ENST00000480495 CTCFLQ8NI51 663 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms