RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 PDRG1Q9NUG6 133 aa13.98□□□□□ -0.17
CCM2-212ENST00000480382 SEC63Q9UGP8 760 aaKnown RBP13.98□□□□□ -0.17
CCM2-212ENST00000480382 DDX49Q9Y6V7 483 aaKnown RBP13.98□□□□□ -0.17
CCM2-212ENST00000480382 SGPL1O95470 568 aa13.97□□□□□ -0.17
CCM2-212ENST00000480382 SNAI1O95863 264 aaPredicted RBP13.97□□□□□ -0.17
CCM2-212ENST00000480382 ALDH5A1P51649 535 aaPredicted RBP13.97□□□□□ -0.17
CCM2-212ENST00000480382 MSL3Q8N5Y2 521 aaKnown RBP13.97□□□□□ -0.17
CCM2-212ENST00000480382 IL17RAQ96F46 866 aa13.97□□□□□ -0.17
CCM2-212ENST00000480382 LARP6Q9BRS8 491 aaKnown RBP13.97□□□□□ -0.17
CCM2-212ENST00000480382 FAM217BQ9NTX9 383 aaPredicted RBP13.97□□□□□ -0.17
CCM2-212ENST00000480382 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.97□□□□□ -0.17
CCM2-212ENST00000480382 ZHX1Q9UKY1 873 aaPredicted RBP13.97□□□□□ -0.17
CCM2-212ENST00000480382 CNPY2Q9Y2B0 182 aa13.97□□□□□ -0.17
CCM2-212ENST00000480382 CFBP00751 764 aa13.96□□□□□ -0.17
CCM2-212ENST00000480382 ADD1P35611 737 aaKnown RBP13.96□□□□□ -0.17
CCM2-212ENST00000480382 EVCP57679 992 aa13.96□□□□□ -0.17
CCM2-212ENST00000480382 FUT2Q10981 343 aa13.96□□□□□ -0.17
CCM2-212ENST00000480382 ANO1Q5XXA6 986 aa13.96□□□□□ -0.17
CCM2-212ENST00000480382 LHX8Q68G74 356 aa13.96□□□□□ -0.17
CCM2-212ENST00000480382 MCF2L2Q86YR7 1114 aa13.96□□□□□ -0.17
CCM2-212ENST00000480382 RGS22Q8NE09 1264 aa13.96□□□□□ -0.17
CCM2-212ENST00000480382 CRISPLD2Q9H0B8 497 aa13.96□□□□□ -0.17
CCM2-212ENST00000480382 COL20A1Q9P218 1284 aa13.96□□□□□ -0.17
CCM2-212ENST00000480382 DDX20Q9UHI6 824 aaKnown RBP13.96□□□□□ -0.17
CCM2-212ENST00000480382 NRBP1Q9UHY1 535 aa13.96□□□□□ -0.17
CCM2-212ENST00000480382 ASB14A6NK59 587 aa13.95□□□□□ -0.18
CCM2-212ENST00000480382 SEPT4O43236 478 aa13.95□□□□□ -0.18
CCM2-212ENST00000480382 TFRCP02786 760 aaKnown RBP13.95□□□□□ -0.18
CCM2-212ENST00000480382 ZNF865P0CJ78 1059 aaPredicted RBP13.95□□□□□ -0.18
CCM2-212ENST00000480382 PDIA3P30101 505 aaKnown RBP13.95□□□□□ -0.18
CCM2-212ENST00000480382 RGS19P49795 217 aa13.95□□□□□ -0.18
CCM2-212ENST00000480382 HSD17B4P51659 736 aa13.95□□□□□ -0.18
CCM2-212ENST00000480382 TRAF1Q13077 416 aa13.95□□□□□ -0.18
CCM2-212ENST00000480382 SYTL5Q8TDW5 730 aaPredicted RBP13.95□□□□□ -0.18
CCM2-212ENST00000480382 GPKOWQ92917 476 aaPredicted RBP eCLIP13.95□□□□□ -0.18
CCM2-212ENST00000480382 LENG1Q96BZ8 264 aaPredicted RBP13.95□□□□□ -0.18
CCM2-212ENST00000480382 NCOA5Q9HCD5 579 aaKnown RBP13.95□□□□□ -0.18
CCM2-212ENST00000480382 ADD3Q9UEY8 706 aaKnown RBP13.95□□□□□ -0.18
CCM2-212ENST00000480382 KIAA1217Q5T5P2 1943 aa13.94□□□□□ -0.18
CCM2-212ENST00000480382 CCDC196A0A1B0GTZ2 297 aa13.94□□□□□ -0.18
CCM2-212ENST00000480382 MSCO60682 206 aa13.94□□□□□ -0.18
CCM2-212ENST00000480382 AKR1A1P14550 325 aa13.94□□□□□ -0.18
CCM2-212ENST00000480382 HOXA13P31271 388 aaPredicted RBP13.94□□□□□ -0.18
CCM2-212ENST00000480382 AK2P54819 239 aa13.94□□□□□ -0.18
CCM2-212ENST00000480382 CCT2P78371 535 aaKnown RBP13.94□□□□□ -0.18
CCM2-212ENST00000480382 GHRHRQ02643 423 aa13.94□□□□□ -0.18
CCM2-212ENST00000480382 STK3Q13188 491 aa13.94□□□□□ -0.18
CCM2-212ENST00000480382 ACVR2BQ13705 512 aa13.94□□□□□ -0.18
CCM2-212ENST00000480382 PPP2R5BQ15173 497 aa13.94□□□□□ -0.18
CCM2-212ENST00000480382 HEATR3Q7Z4Q2 680 aa13.94□□□□□ -0.18
CCM2-212ENST00000480382 FBXO16Q8IX29 292 aaPredicted RBP13.94□□□□□ -0.18
CCM2-212ENST00000480382 C22orf23Q9BZE7 217 aa13.94□□□□□ -0.18
CCM2-212ENST00000480382 KATNBL1Q9H079 304 aa13.94□□□□□ -0.18
CCM2-212ENST00000480382 ABHD16BQ9H3Z7 469 aa13.94□□□□□ -0.18
CCM2-212ENST00000480382 OGDHLQ9ULD0 1010 aa13.94□□□□□ -0.18
CCM2-212ENST00000480382 FARP2O94887 1054 aaPredicted RBP13.93□□□□□ -0.18
CCM2-212ENST00000480382 WWC2Q6AWC2 1192 aa13.93□□□□□ -0.18
CCM2-212ENST00000480382 NOL8Q76FK4 1167 aaKnown RBP13.93□□□□□ -0.18
CCM2-212ENST00000480382 EEPD1Q7L9B9 569 aa13.93□□□□□ -0.18
CCM2-212ENST00000480382 DNERQ8NFT8 737 aa13.93□□□□□ -0.18
CCM2-212ENST00000480382 MORC4Q8TE76 937 aa13.93□□□□□ -0.18
CCM2-212ENST00000480382 DIS3LQ8TF46 1054 aaKnown RBP13.93□□□□□ -0.18
CCM2-212ENST00000480382 ZNF274Q96GC6 653 aaPredicted RBP13.93□□□□□ -0.18
CCM2-212ENST00000480382 TAAR1Q96RJ0 339 aa13.93□□□□□ -0.18
CCM2-212ENST00000480382 MAF1Q9H063 256 aa13.93□□□□□ -0.18
CCM2-212ENST00000480382 V9GY48 417 aaPredicted RBP13.93□□□□□ -0.18
CCM2-212ENST00000480382 ALPK3Q96L96 1907 aa13.93□□□□□ -0.18
CCM2-212ENST00000480382 DNAH12Q6ZR08 3092 aa13.92□□□□□ -0.18
CCM2-212ENST00000480382 LOC102724159A0A0B4J2E5 919 aa13.92□□□□□ -0.18
CCM2-212ENST00000480382 GCOM1H8Y6P7 765 aaPredicted RBP13.92□□□□□ -0.18
CCM2-212ENST00000480382 ADCY6O43306 1168 aa13.92□□□□□ -0.18
CCM2-212ENST00000480382 PPFIA3O75145 1194 aa13.92□□□□□ -0.18
CCM2-212ENST00000480382 POLR2MP0CAP2 368 aa13.92□□□□□ -0.18
CCM2-212ENST00000480382 EIF2AK2P19525 551 aaKnown RBP13.92□□□□□ -0.18
CCM2-212ENST00000480382 EDNRBP24530 442 aa13.92□□□□□ -0.18
CCM2-212ENST00000480382 MNX1P50219 401 aaPredicted RBP13.92□□□□□ -0.18
CCM2-212ENST00000480382 NEK4P51957 841 aa13.92□□□□□ -0.18
CCM2-212ENST00000480382 PWP2Q15269 919 aaKnown RBP13.92□□□□□ -0.18
CCM2-212ENST00000480382 NTRK3Q16288 839 aa13.92□□□□□ -0.18
CCM2-212ENST00000480382 CCDC144BQ3MJ40 725 aa13.92□□□□□ -0.18
CCM2-212ENST00000480382 PHKBQ93100 1093 aa13.92□□□□□ -0.18
CCM2-212ENST00000480382 RMDN3Q96TC7 470 aa13.92□□□□□ -0.18
CCM2-212ENST00000480382 ALDH8A1Q9H2A2 487 aaPredicted RBP13.92□□□□□ -0.18
CCM2-212ENST00000480382 VTA1Q9NP79 307 aa13.92□□□□□ -0.18
CCM2-212ENST00000480382 FAM184BQ9ULE4 1060 aa13.92□□□□□ -0.18
CCM2-212ENST00000480382 TPCN1Q9ULQ1 816 aa13.92□□□□□ -0.18
CCM2-212ENST00000480382 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.91□□□□□ -0.18
CCM2-212ENST00000480382 RARBP10826 455 aa13.91□□□□□ -0.18
CCM2-212ENST00000480382 ADCYAP1R1P41586 468 aa13.91□□□□□ -0.18
CCM2-212ENST00000480382 RBM25P49756 843 aaKnown RBP13.91□□□□□ -0.18
CCM2-212ENST00000480382 MLLT1Q03111 559 aaPredicted RBP13.91□□□□□ -0.18
CCM2-212ENST00000480382 PDE4DQ08499 809 aa13.91□□□□□ -0.18
CCM2-212ENST00000480382 ANKRD1Q15327 319 aa13.91□□□□□ -0.18
CCM2-212ENST00000480382 ARHGEF16Q5VV41 709 aa13.91□□□□□ -0.18
CCM2-212ENST00000480382 TYW1BQ6NUM6 668 aa13.91□□□□□ -0.18
CCM2-212ENST00000480382 UBE2Q1Q7Z7E8 422 aa13.91□□□□□ -0.18
CCM2-212ENST00000480382 FCHSD1Q86WN1 690 aa13.91□□□□□ -0.18
CCM2-212ENST00000480382 SAMD3Q8N6K7 520 aa13.91□□□□□ -0.18
CCM2-212ENST00000480382 ANKLE1Q8NAG6 615 aa13.91□□□□□ -0.18
CCM2-212ENST00000480382 NSUN6Q8TEA1 469 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms