RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 BACE1P56817 501 aa12.46□□□□□ -0.41
VTI1A-204ENST00000480057 GHRHRQ02643 423 aa12.46□□□□□ -0.41
VTI1A-204ENST00000480057 C11orf57Q6ZUT1 292 aaPredicted RBP12.46□□□□□ -0.41
VTI1A-204ENST00000480057 USP50Q70EL3 339 aaPredicted RBP12.46□□□□□ -0.41
VTI1A-204ENST00000480057 IGSF22Q8N9C0 903 aa12.46□□□□□ -0.41
VTI1A-204ENST00000480057 MLKLQ8NB16 471 aa12.46□□□□□ -0.41
VTI1A-204ENST00000480057 ZNF280CQ8ND82 737 aa12.46□□□□□ -0.41
VTI1A-204ENST00000480057 SMARCE1Q969G3 411 aa12.46□□□□□ -0.41
VTI1A-204ENST00000480057 KLRG1Q96E93 195 aa12.46□□□□□ -0.41
VTI1A-204ENST00000480057 GSDMAQ96QA5 445 aa12.46□□□□□ -0.41
VTI1A-204ENST00000480057 SLF1Q9BQI6 1058 aa12.46□□□□□ -0.41
VTI1A-204ENST00000480057 GLIS2Q9BZE0 524 aaPredicted RBP12.46□□□□□ -0.41
VTI1A-204ENST00000480057 MAF1Q9H063 256 aa12.46□□□□□ -0.41
VTI1A-204ENST00000480057 EHMT1Q9H9B1 1298 aa12.46□□□□□ -0.41
VTI1A-204ENST00000480057 MAP3K20Q9NYL2 800 aaKnown RBP12.46□□□□□ -0.41
VTI1A-204ENST00000480057 RABGAP1Q9Y3P9 1069 aa12.46□□□□□ -0.41
VTI1A-204ENST00000480057 PCDHA5Q9Y5H7 936 aa12.46□□□□□ -0.41
VTI1A-204ENST00000480057 SSC5DA1L4H1 1573 aa12.46□□□□□ -0.42
VTI1A-204ENST00000480057 MYH7BA7E2Y1 1941 aa12.45□□□□□ -0.42
VTI1A-204ENST00000480057 IKBKBO14920 756 aa12.45□□□□□ -0.42
VTI1A-204ENST00000480057 GTPBP6O43824 516 aaPredicted RBP12.45□□□□□ -0.42
VTI1A-204ENST00000480057 GRIN3BO60391 1043 aa12.45□□□□□ -0.42
VTI1A-204ENST00000480057 ICAM1P05362 532 aa12.45□□□□□ -0.42
VTI1A-204ENST00000480057 CYP3A4P08684 503 aa12.45□□□□□ -0.42
VTI1A-204ENST00000480057 PTPRAP18433 802 aa12.45□□□□□ -0.42
VTI1A-204ENST00000480057 CIITAP33076 1130 aa12.45□□□□□ -0.42
VTI1A-204ENST00000480057 TPM4P67936 248 aa12.45□□□□□ -0.42
VTI1A-204ENST00000480057 PNOCQ13519 176 aa12.45□□□□□ -0.42
VTI1A-204ENST00000480057 Q4G0T1 1027 aa12.45□□□□□ -0.42
VTI1A-204ENST00000480057 PDXDC2PQ6P474 469 aa12.45□□□□□ -0.42
VTI1A-204ENST00000480057 SARM1Q6SZW1 724 aa12.45□□□□□ -0.42
VTI1A-204ENST00000480057 LUZP1Q86V48 1076 aa12.45□□□□□ -0.42
VTI1A-204ENST00000480057 SULF1Q8IWU6 871 aa12.45□□□□□ -0.42
VTI1A-204ENST00000480057 PDILTQ8N807 584 aa12.45□□□□□ -0.42
VTI1A-204ENST00000480057 KIFC2Q96AC6 838 aa12.45□□□□□ -0.42
VTI1A-204ENST00000480057 DCPSQ96C86 337 aaKnown RBP12.45□□□□□ -0.42
VTI1A-204ENST00000480057 TRIM44Q96DX7 344 aaPredicted RBP12.45□□□□□ -0.42
VTI1A-204ENST00000480057 PAGE5Q96GU1 130 aa12.45□□□□□ -0.42
VTI1A-204ENST00000480057 WRNIP1Q96S55 665 aa12.45□□□□□ -0.42
VTI1A-204ENST00000480057 DISC1Q9NRI5 854 aa12.45□□□□□ -0.42
VTI1A-204ENST00000480057 DDX25Q9UHL0 483 aaKnown RBP12.45□□□□□ -0.42
VTI1A-204ENST00000480057 STK24Q9Y6E0 443 aa12.45□□□□□ -0.42
VTI1A-204ENST00000480057 PHIPQ8WWQ0 1821 aa12.45□□□□□ -0.42
VTI1A-204ENST00000480057 PAPPA2Q9BXP8 1791 aa12.45□□□□□ -0.42
VTI1A-204ENST00000480057 BECN2A8MW95 431 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 USP17L15C9J2P7 530 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 USP17L13C9JLJ4 530 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 USP17L11C9JVI0 530 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 USP17L18D6R9N7 530 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 USP17L22D6RA61 530 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 USP17L17D6RBQ6 530 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 USP17L19D6RCP7 530 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 USP17L20D6RJB6 530 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 GCOM1H8Y6P7 765 aaPredicted RBP12.44□□□□□ -0.42
VTI1A-204ENST00000480057 OPLAHO14841 1288 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 TDP2O95551 362 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 POLR2MP0CAP2 368 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 VCAM1P19320 739 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 STAT6P42226 847 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 ARHGAP4P98171 946 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 USP17L24Q0WX57 530 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 DPYDQ12882 1025 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 MORC3Q14149 939 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 DPCR1Q3MIW9 517 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 USH1GQ495M9 461 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 RRAGBQ5VZM2 374 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 USP17L6PQ6QN14 398 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 SLFN12Q8IYM2 578 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.44□□□□□ -0.42
VTI1A-204ENST00000480057 GTPBP4Q9BZE4 634 aaKnown RBP12.44□□□□□ -0.42
VTI1A-204ENST00000480057 EMILIN3Q9NT22 766 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.44□□□□□ -0.42
VTI1A-204ENST00000480057 MAN1B1Q9UKM7 699 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 PPP1R9AQ9ULJ8 1098 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 SCAF8Q9UPN6 1271 aaKnown RBP12.44□□□□□ -0.42
VTI1A-204ENST00000480057 SCN4AP35499 1836 aa12.44□□□□□ -0.42
VTI1A-204ENST00000480057 MYPNQ86TC9 1320 aa12.43□□□□□ -0.42
VTI1A-204ENST00000480057 SLC37A4O43826 429 aa12.43□□□□□ -0.42
VTI1A-204ENST00000480057 ADCY5O95622 1261 aa12.43□□□□□ -0.42
VTI1A-204ENST00000480057 HOXA7P31268 230 aaPredicted RBP12.43□□□□□ -0.42
VTI1A-204ENST00000480057 OAZ1P54368 228 aa12.43□□□□□ -0.42
VTI1A-204ENST00000480057 SPP2Q13103 211 aa12.43□□□□□ -0.42
VTI1A-204ENST00000480057 MTMR2Q13614 643 aa12.43□□□□□ -0.42
VTI1A-204ENST00000480057 ZYXQ15942 572 aaKnown RBP12.43□□□□□ -0.42
VTI1A-204ENST00000480057 SH3D19Q5HYK7 790 aa12.43□□□□□ -0.42
VTI1A-204ENST00000480057 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.43□□□□□ -0.42
VTI1A-204ENST00000480057 CABP7Q86V35 215 aa12.43□□□□□ -0.42
VTI1A-204ENST00000480057 LDHDQ86WU2 507 aa12.43□□□□□ -0.42
VTI1A-204ENST00000480057 MCF2L2Q86YR7 1114 aa12.43□□□□□ -0.42
VTI1A-204ENST00000480057 DHX40Q8IX18 779 aaKnown RBP12.43□□□□□ -0.42
VTI1A-204ENST00000480057 RBM46Q8TBY0 533 aaKnown RBP12.43□□□□□ -0.42
VTI1A-204ENST00000480057 CALML4Q96GE6 196 aa12.43□□□□□ -0.42
VTI1A-204ENST00000480057 FAM20AQ96MK3 541 aa12.43□□□□□ -0.42
VTI1A-204ENST00000480057 SLC38A10Q9HBR0 1119 aa12.43□□□□□ -0.42
VTI1A-204ENST00000480057 KCNMB3Q9NPA1 279 aa12.43□□□□□ -0.42
VTI1A-204ENST00000480057 RMND1Q9NWS8 449 aa12.43□□□□□ -0.42
VTI1A-204ENST00000480057 STK17AQ9UEE5 414 aa12.43□□□□□ -0.42
VTI1A-204ENST00000480057 PARP14Q460N5 1801 aa12.43□□□□□ -0.42
VTI1A-204ENST00000480057 FOXN1O15353 648 aa12.42□□□□□ -0.42
VTI1A-204ENST00000480057 PPP1R12BO60237 982 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms