RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 MCMBPQ9BTE3 642 aa8.3□□□□□ -1.08
COMMD3-212ENST00000479958 GCM1Q9NP62 436 aa8.3□□□□□ -1.08
COMMD3-212ENST00000479958 MBD1Q9UIS9 605 aaPredicted RBP8.3□□□□□ -1.08
COMMD3-212ENST00000479958 IRAK3Q9Y616 596 aa8.3□□□□□ -1.08
COMMD3-212ENST00000479958 NPHP3-ACAD11A0A0J9YXS1 232 aa8.29□□□□□ -1.08
COMMD3-212ENST00000479958 N4BP3O15049 544 aa8.29□□□□□ -1.08
COMMD3-212ENST00000479958 CYBBP04839 570 aa8.29□□□□□ -1.08
COMMD3-212ENST00000479958 ZSCAN22P10073 491 aaPredicted RBP8.29□□□□□ -1.08
COMMD3-212ENST00000479958 ZC3H14Q6PJT7 736 aaKnown RBP8.29□□□□□ -1.08
COMMD3-212ENST00000479958 C6orf15Q6UXA7 325 aaPredicted RBP8.29□□□□□ -1.08
COMMD3-212ENST00000479958 CABP7Q86V35 215 aa8.29□□□□□ -1.08
COMMD3-212ENST00000479958 SIGLEC10Q96LC7 697 aa8.29□□□□□ -1.08
COMMD3-212ENST00000479958 CNTD2Q9H8S5 307 aa8.29□□□□□ -1.08
COMMD3-212ENST00000479958 LRP2BPQ9P2M1 347 aa8.29□□□□□ -1.08
COMMD3-212ENST00000479958 APEX2Q9UBZ4 518 aa8.29□□□□□ -1.08
COMMD3-212ENST00000479958 DBR1Q9UK59 544 aaKnown RBP8.29□□□□□ -1.08
COMMD3-212ENST00000479958 ABCC8Q09428 1581 aa8.29□□□□□ -1.08
COMMD3-212ENST00000479958 MAPKAPK2P49137 400 aa8.29□□□□□ -1.08
COMMD3-212ENST00000479958 TMC6Q7Z403 805 aa8.29□□□□□ -1.08
COMMD3-212ENST00000479958 AMIGO3Q86WK7 504 aa8.29□□□□□ -1.08
COMMD3-212ENST00000479958 TINF2Q9BSI4 451 aa8.29□□□□□ -1.08
COMMD3-212ENST00000479958 KCTD3Q9Y597 815 aa8.29□□□□□ -1.08
COMMD3-212ENST00000479958 MSL3P1P0C860 447 aa8.28□□□□□ -1.08
COMMD3-212ENST00000479958 SV2CQ496J9 727 aa8.28□□□□□ -1.08
COMMD3-212ENST00000479958 RPTNQ6XPR3 784 aa8.28□□□□□ -1.08
COMMD3-212ENST00000479958 C1QL4Q86Z23 238 aa8.28□□□□□ -1.08
COMMD3-212ENST00000479958 TMEM151BQ8IW70 566 aa8.28□□□□□ -1.08
COMMD3-212ENST00000479958 ZNF513Q8N8E2 541 aaPredicted RBP8.28□□□□□ -1.08
COMMD3-212ENST00000479958 MZB1Q8WU39 189 aa8.28□□□□□ -1.08
COMMD3-212ENST00000479958 IRF2BPLQ9H1B7 796 aa8.28□□□□□ -1.08
COMMD3-212ENST00000479958 CYP26B1Q9NR63 512 aa8.28□□□□□ -1.08
COMMD3-212ENST00000479958 LOC105371045A0A1W2PR82 267 aa8.27□□□□□ -1.09
COMMD3-212ENST00000479958 SRGAP3O43295 1099 aa8.27□□□□□ -1.09
COMMD3-212ENST00000479958 NPHS1O60500 1241 aa8.27□□□□□ -1.09
COMMD3-212ENST00000479958 FGRP09769 529 aa8.27□□□□□ -1.09
COMMD3-212ENST00000479958 FBLN7Q53RD9 439 aa8.27□□□□□ -1.09
COMMD3-212ENST00000479958 LDHDQ86WU2 507 aa8.27□□□□□ -1.09
COMMD3-212ENST00000479958 CPNE8Q86YQ8 564 aa8.27□□□□□ -1.09
COMMD3-212ENST00000479958 LZTR1Q8N653 840 aa8.27□□□□□ -1.09
COMMD3-212ENST00000479958 USP33Q8TEY7 942 aa8.27□□□□□ -1.09
COMMD3-212ENST00000479958 ZNF408Q9H9D4 720 aa8.27□□□□□ -1.09
COMMD3-212ENST00000479958 F8W031 263 aaPredicted RBP8.26□□□□□ -1.09
COMMD3-212ENST00000479958 DBHP09172 617 aa8.26□□□□□ -1.09
COMMD3-212ENST00000479958 TARBP2Q15633 366 aaKnown RBP8.26□□□□□ -1.09
COMMD3-212ENST00000479958 GTF2IRD2BQ6EKJ0 949 aa8.26□□□□□ -1.09
COMMD3-212ENST00000479958 IQCEQ6IPM2 695 aa8.26□□□□□ -1.09
COMMD3-212ENST00000479958 GTF2IRD2Q86UP8 949 aa8.26□□□□□ -1.09
COMMD3-212ENST00000479958 TRIM59Q8IWR1 403 aa8.26□□□□□ -1.09
COMMD3-212ENST00000479958 FAM9AQ8IZU1 332 aaPredicted RBP8.26□□□□□ -1.09
COMMD3-212ENST00000479958 GMLQ99445 158 aa8.26□□□□□ -1.09
COMMD3-212ENST00000479958 PFKLP17858 780 aa8.25□□□□□ -1.09
COMMD3-212ENST00000479958 TACR1P25103 407 aa8.25□□□□□ -1.09
COMMD3-212ENST00000479958 HOXC12P31275 282 aa8.25□□□□□ -1.09
COMMD3-212ENST00000479958 SCRN1Q12765 414 aa8.25□□□□□ -1.09
COMMD3-212ENST00000479958 MCF2L2Q86YR7 1114 aa8.25□□□□□ -1.09
COMMD3-212ENST00000479958 COPS5Q92905 334 aa8.25□□□□□ -1.09
COMMD3-212ENST00000479958 CCDC140Q96MF4 163 aa8.25□□□□□ -1.09
COMMD3-212ENST00000479958 ARID1BQ8NFD5 2236 aaPredicted RBP8.24□□□□□ -1.09
COMMD3-212ENST00000479958 AGRPO00253 132 aa8.24□□□□□ -1.09
COMMD3-212ENST00000479958 CDR1P51861 262 aa8.24□□□□□ -1.09
COMMD3-212ENST00000479958 LCE1DQ5T752 114 aa8.24□□□□□ -1.09
COMMD3-212ENST00000479958 TCERG1LQ5VWI1 586 aa8.24□□□□□ -1.09
COMMD3-212ENST00000479958 EEPD1Q7L9B9 569 aa8.24□□□□□ -1.09
COMMD3-212ENST00000479958 MRGPRX3Q96LB0 322 aa8.24□□□□□ -1.09
COMMD3-212ENST00000479958 MMP19Q99542 508 aa8.24□□□□□ -1.09
COMMD3-212ENST00000479958 EPN3Q9H201 632 aa8.24□□□□□ -1.09
COMMD3-212ENST00000479958 GPRC5CQ9NQ84 441 aa8.24□□□□□ -1.09
COMMD3-212ENST00000479958 CLEC1BQ9P126 229 aa8.24□□□□□ -1.09
COMMD3-212ENST00000479958 NUDT5Q9UKK9 219 aa8.24□□□□□ -1.09
COMMD3-212ENST00000479958 SUSD5O60279 629 aa8.23□□□□□ -1.09
COMMD3-212ENST00000479958 PLS3P13797 630 aa8.23□□□□□ -1.09
COMMD3-212ENST00000479958 EPHB3P54753 998 aa8.23□□□□□ -1.09
COMMD3-212ENST00000479958 PLEKHN1Q494U1 663 aaPredicted RBP8.23□□□□□ -1.09
COMMD3-212ENST00000479958 SPOCD1Q6ZMY3 1216 aa8.23□□□□□ -1.09
COMMD3-212ENST00000479958 LCNL1Q6ZST4 164 aa8.23□□□□□ -1.09
COMMD3-212ENST00000479958 NKX2-4Q9H2Z4 354 aa8.23□□□□□ -1.09
COMMD3-212ENST00000479958 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.23□□□□□ -1.09
COMMD3-212ENST00000479958 SSPNQ14714 243 aa8.22□□□□□ -1.09
COMMD3-212ENST00000479958 NLGN1Q8N2Q7 840 aa8.22□□□□□ -1.09
COMMD3-212ENST00000479958 GULP1Q9UBP9 304 aa8.22□□□□□ -1.09
COMMD3-212ENST00000479958 RWDD3Q9Y3V2 267 aa8.22□□□□□ -1.09
COMMD3-212ENST00000479958 PCDHA5Q9Y5H7 936 aa8.22□□□□□ -1.09
COMMD3-212ENST00000479958 ZC3H12DA2A288 527 aaKnown RBP8.21□□□□□ -1.09
COMMD3-212ENST00000479958 C7orf72A4D263 438 aa8.21□□□□□ -1.09
COMMD3-212ENST00000479958 BUB1BO60566 1050 aaPredicted RBP8.21□□□□□ -1.09
COMMD3-212ENST00000479958 CPP00450 1065 aa8.21□□□□□ -1.09
COMMD3-212ENST00000479958 ITGAVP06756 1048 aa8.21□□□□□ -1.09
COMMD3-212ENST00000479958 PI3P19957 117 aa8.21□□□□□ -1.09
COMMD3-212ENST00000479958 PRR5P85299 388 aa8.21□□□□□ -1.09
COMMD3-212ENST00000479958 CNKSR3Q6P9H4 555 aa8.21□□□□□ -1.09
COMMD3-212ENST00000479958 ANKS3Q6ZW76 656 aa8.21□□□□□ -1.09
COMMD3-212ENST00000479958 NETO2Q8NC67 525 aa8.21□□□□□ -1.09
COMMD3-212ENST00000479958 PEX11GQ96HA9 241 aa8.21□□□□□ -1.09
COMMD3-212ENST00000479958 IGSF5Q9NSI5 407 aa8.21□□□□□ -1.09
COMMD3-212ENST00000479958 CFTRP13569 1480 aa8.21□□□□□ -1.1
COMMD3-212ENST00000479958 IRS2Q9Y4H2 1338 aa8.21□□□□□ -1.1
COMMD3-212ENST00000479958 B2RBV5 119 aa8.2□□□□□ -1.1
COMMD3-212ENST00000479958 IRS4O14654 1257 aaPredicted RBP8.2□□□□□ -1.1
COMMD3-212ENST00000479958 ZBTB7AO95365 584 aa8.2□□□□□ -1.1
COMMD3-212ENST00000479958 THBDP07204 575 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms