RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 KLRC3Q07444 240 aa12.85□□□□□ -0.35
CCDC58-205ENST00000479899 CCDC85BQ15834 202 aaPredicted RBP12.85□□□□□ -0.35
CCDC58-205ENST00000479899 CCDC144BQ3MJ40 725 aa12.85□□□□□ -0.35
CCDC58-205ENST00000479899 CCSAPQ6IQ19 270 aaPredicted RBP12.85□□□□□ -0.35
CCDC58-205ENST00000479899 ZSCAN25Q6NSZ9 544 aa12.85□□□□□ -0.35
CCDC58-205ENST00000479899 CCDC174Q6PII3 467 aa12.85□□□□□ -0.35
CCDC58-205ENST00000479899 NOL8Q76FK4 1167 aaKnown RBP12.85□□□□□ -0.35
CCDC58-205ENST00000479899 SIRT2Q8IXJ6 389 aa12.85□□□□□ -0.35
CCDC58-205ENST00000479899 LRRC47Q8N1G4 583 aaKnown RBP12.85□□□□□ -0.35
CCDC58-205ENST00000479899 TMEM199Q8N511 208 aa12.85□□□□□ -0.35
CCDC58-205ENST00000479899 CLIP2Q9UDT6 1046 aa12.85□□□□□ -0.35
CCDC58-205ENST00000479899 COG6Q9Y2V7 657 aa12.85□□□□□ -0.35
CCDC58-205ENST00000479899 DNAJC25-GNG10A0A024R161 153 aa12.84□□□□□ -0.35
CCDC58-205ENST00000479899 DDX11L8A8MPP1 907 aa12.84□□□□□ -0.35
CCDC58-205ENST00000479899 ARVCFO00192 962 aa12.84□□□□□ -0.35
CCDC58-205ENST00000479899 TLR3O15455 904 aaKnown RBP12.84□□□□□ -0.35
CCDC58-205ENST00000479899 RAB11FIP3O75154 756 aa12.84□□□□□ -0.35
CCDC58-205ENST00000479899 IGFBP4P22692 258 aa12.84□□□□□ -0.35
CCDC58-205ENST00000479899 BEX3Q00994 111 aa12.84□□□□□ -0.35
CCDC58-205ENST00000479899 PDE4DQ08499 809 aa12.84□□□□□ -0.35
CCDC58-205ENST00000479899 GNASQ5JWF2 1037 aa12.84□□□□□ -0.35
CCDC58-205ENST00000479899 TMEM240Q5SV17 173 aa12.84□□□□□ -0.35
CCDC58-205ENST00000479899 MAMDC4Q6UXC1 1216 aa12.84□□□□□ -0.35
CCDC58-205ENST00000479899 C16orf59Q7L2K0 433 aa12.84□□□□□ -0.35
CCDC58-205ENST00000479899 ARMCX2Q7L311 632 aa12.84□□□□□ -0.35
CCDC58-205ENST00000479899 RPAP2Q8IXW5 612 aaPredicted RBP12.84□□□□□ -0.35
CCDC58-205ENST00000479899 MSL3Q8N5Y2 521 aaKnown RBP12.84□□□□□ -0.35
CCDC58-205ENST00000479899 PCSK9Q8NBP7 692 aaKnown RBP12.84□□□□□ -0.35
CCDC58-205ENST00000479899 FGD4Q96M96 766 aa12.84□□□□□ -0.35
CCDC58-205ENST00000479899 CHD7Q9P2D1 2997 aa12.84□□□□□ -0.35
CCDC58-205ENST00000479899 THEGQ9P2T0 379 aa12.84□□□□□ -0.35
CCDC58-205ENST00000479899 SMARCA5O60264 1052 aaPredicted RBP12.83□□□□□ -0.36
CCDC58-205ENST00000479899 PRDM1O75626 825 aa12.83□□□□□ -0.36
CCDC58-205ENST00000479899 CST5P28325 142 aaPredicted RBP12.83□□□□□ -0.36
CCDC58-205ENST00000479899 CYP2C18P33260 490 aa12.83□□□□□ -0.36
CCDC58-205ENST00000479899 TDO2P48775 406 aa12.83□□□□□ -0.36
CCDC58-205ENST00000479899 PSRC1Q6PGN9 363 aaPredicted RBP12.83□□□□□ -0.36
CCDC58-205ENST00000479899 ZNF365Q70YC5 407 aa12.83□□□□□ -0.36
CCDC58-205ENST00000479899 CCDC144CPQ8IYA2 1237 aa12.83□□□□□ -0.36
CCDC58-205ENST00000479899 MICALL1Q8N3F8 863 aa12.83□□□□□ -0.36
CCDC58-205ENST00000479899 PRPF38AQ8NAV1 312 aaKnown RBP12.83□□□□□ -0.36
CCDC58-205ENST00000479899 REPIN1Q9BWE0 567 aaKnown RBP12.83□□□□□ -0.36
CCDC58-205ENST00000479899 PRR14Q9BWN1 585 aa12.83□□□□□ -0.36
CCDC58-205ENST00000479899 NKX2-4Q9H2Z4 354 aa12.83□□□□□ -0.36
CCDC58-205ENST00000479899 ABHD16BQ9H3Z7 469 aa12.83□□□□□ -0.36
CCDC58-205ENST00000479899 NYAP2Q9P242 653 aa12.83□□□□□ -0.36
CCDC58-205ENST00000479899 RAPGEFL1Q9UHV5 662 aa12.83□□□□□ -0.36
CCDC58-205ENST00000479899 ELP1O95163 1332 aa12.83□□□□□ -0.36
CCDC58-205ENST00000479899 UMODL1Q5DID0 1318 aa12.83□□□□□ -0.36
CCDC58-205ENST00000479899 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.82□□□□□ -0.36
CCDC58-205ENST00000479899 PTGS1P23219 599 aa12.82□□□□□ -0.36
CCDC58-205ENST00000479899 CDK7P50613 346 aa12.82□□□□□ -0.36
CCDC58-205ENST00000479899 GJA9P57773 515 aa12.82□□□□□ -0.36
CCDC58-205ENST00000479899 CNTN2Q02246 1040 aa12.82□□□□□ -0.36
CCDC58-205ENST00000479899 IKQ13123 557 aaPredicted RBP12.82□□□□□ -0.36
CCDC58-205ENST00000479899 FAM126BQ8IXS8 530 aa12.82□□□□□ -0.36
CCDC58-205ENST00000479899 RDH13Q8NBN7 331 aa12.82□□□□□ -0.36
CCDC58-205ENST00000479899 IL27Q8NEV9 243 aa12.82□□□□□ -0.36
CCDC58-205ENST00000479899 UPF3AQ9H1J1 476 aaKnown RBP12.82□□□□□ -0.36
CCDC58-205ENST00000479899 FAM217BQ9NTX9 383 aaPredicted RBP12.82□□□□□ -0.36
CCDC58-205ENST00000479899 MSRAQ9UJ68 235 aa12.82□□□□□ -0.36
CCDC58-205ENST00000479899 DDX19BQ9UMR2 479 aa12.82□□□□□ -0.36
CCDC58-205ENST00000479899 DDX49Q9Y6V7 483 aaKnown RBP12.82□□□□□ -0.36
CCDC58-205ENST00000479899 XIRP2A4UGR9 3374 aa12.82□□□□□ -0.36
CCDC58-205ENST00000479899 GSG1L2A8MUP6 293 aa12.81□□□□□ -0.36
CCDC58-205ENST00000479899 APPP05067 770 aa12.81□□□□□ -0.36
CCDC58-205ENST00000479899 MS4A1P11836 297 aa12.81□□□□□ -0.36
CCDC58-205ENST00000479899 CCL23P55773 120 aa12.81□□□□□ -0.36
CCDC58-205ENST00000479899 ADGRE1Q14246 886 aa12.81□□□□□ -0.36
CCDC58-205ENST00000479899 RAB30Q15771 203 aa12.81□□□□□ -0.36
CCDC58-205ENST00000479899 TSHZ3Q63HK5 1081 aa12.81□□□□□ -0.36
CCDC58-205ENST00000479899 CXCL17Q6UXB2 119 aa12.81□□□□□ -0.36
CCDC58-205ENST00000479899 ZNF444Q8N0Y2 327 aaPredicted RBP12.81□□□□□ -0.36
CCDC58-205ENST00000479899 ADAMTS19Q8TE59 1207 aa12.81□□□□□ -0.36
CCDC58-205ENST00000479899 CEP95Q96GE4 821 aa12.81□□□□□ -0.36
CCDC58-205ENST00000479899 STRBPQ96SI9 672 aaKnown RBP12.81□□□□□ -0.36
CCDC58-205ENST00000479899 LRRCC1Q9C099 1032 aa12.81□□□□□ -0.36
CCDC58-205ENST00000479899 HIPK3Q9H422 1215 aa12.81□□□□□ -0.36
CCDC58-205ENST00000479899 SLC38A10Q9HBR0 1119 aa12.81□□□□□ -0.36
CCDC58-205ENST00000479899 EPB41L4AQ9HCS5 686 aaPredicted RBP12.81□□□□□ -0.36
CCDC58-205ENST00000479899 IL23AQ9NPF7 189 aa12.81□□□□□ -0.36
CCDC58-205ENST00000479899 CXXC1Q9P0U4 656 aaPredicted RBP12.81□□□□□ -0.36
CCDC58-205ENST00000479899 FBXO40Q9UH90 709 aa12.81□□□□□ -0.36
CCDC58-205ENST00000479899 M0R2C6 588 aa12.8□□□□□ -0.36
CCDC58-205ENST00000479899 RABGGTBP53611 331 aa12.8□□□□□ -0.36
CCDC58-205ENST00000479899 TNFAIP2Q03169 654 aa12.8□□□□□ -0.36
CCDC58-205ENST00000479899 KMT5BQ4FZB7 885 aa12.8□□□□□ -0.36
CCDC58-205ENST00000479899 SBK1Q52WX2 424 aa12.8□□□□□ -0.36
CCDC58-205ENST00000479899 SLFN13Q68D06 897 aa12.8□□□□□ -0.36
CCDC58-205ENST00000479899 EEPD1Q7L9B9 569 aa12.8□□□□□ -0.36
CCDC58-205ENST00000479899 OTOP2Q7RTS6 562 aa12.8□□□□□ -0.36
CCDC58-205ENST00000479899 TLK2Q86UE8 772 aa12.8□□□□□ -0.36
CCDC58-205ENST00000479899 PARP9Q8IXQ6 854 aa12.8□□□□□ -0.36
CCDC58-205ENST00000479899 CHST13Q8NET6 341 aa12.8□□□□□ -0.36
CCDC58-205ENST00000479899 OSBP2Q969R2 916 aa12.8□□□□□ -0.36
CCDC58-205ENST00000479899 MTIF3Q9H2K0 278 aaKnown RBP12.8□□□□□ -0.36
CCDC58-205ENST00000479899 ACAD9Q9H845 621 aa12.8□□□□□ -0.36
CCDC58-205ENST00000479899 SLC28A3Q9HAS3 691 aa12.8□□□□□ -0.36
CCDC58-205ENST00000479899 RNF146Q9NTX7 359 aa12.8□□□□□ -0.36
CCDC58-205ENST00000479899 ZBTB40Q9NUA8 1239 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms