RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 CLEC4DQ8WXI8 215 aa12.76□□□□□ -0.37
APTX-223ENST00000479656 GPBP1L1Q9HC44 474 aaPredicted RBP12.76□□□□□ -0.37
APTX-223ENST00000479656 HOMER2Q9NSB8 354 aa12.76□□□□□ -0.37
APTX-223ENST00000479656 DACT1Q9NYF0 836 aa12.76□□□□□ -0.37
APTX-223ENST00000479656 RIPK3Q9Y572 518 aa12.76□□□□□ -0.37
APTX-223ENST00000479656 SPDYE3A6NKU9 549 aa12.76□□□□□ -0.37
APTX-223ENST00000479656 NFIBO00712 420 aa12.76□□□□□ -0.37
APTX-223ENST00000479656 CMA1P23946 247 aa12.76□□□□□ -0.37
APTX-223ENST00000479656 AP3B2Q13367 1082 aa12.76□□□□□ -0.37
APTX-223ENST00000479656 SNAPC2Q13487 334 aa12.76□□□□□ -0.37
APTX-223ENST00000479656 MUM1L1Q5H9M0 696 aa12.76□□□□□ -0.37
APTX-223ENST00000479656 MCTP2Q6DN12 878 aa12.76□□□□□ -0.37
APTX-223ENST00000479656 FASTKD5Q7L8L6 764 aaKnown RBP12.76□□□□□ -0.37
APTX-223ENST00000479656 MRPS27Q92552 414 aaKnown RBP12.76□□□□□ -0.37
APTX-223ENST00000479656 TRERF1Q96PN7 1200 aa12.76□□□□□ -0.37
APTX-223ENST00000479656 TMEM60Q9H2L4 133 aa12.76□□□□□ -0.37
APTX-223ENST00000479656 MORC2Q9Y6X9 1032 aaPredicted RBP12.76□□□□□ -0.37
APTX-223ENST00000479656 RLFQ13129 1914 aa12.76□□□□□ -0.37
APTX-223ENST00000479656 MYPNQ86TC9 1320 aa12.75□□□□□ -0.37
APTX-223ENST00000479656 PTPRFP10586 1907 aa12.75□□□□□ -0.37
APTX-223ENST00000479656 TDP2O95551 362 aa12.75□□□□□ -0.37
APTX-223ENST00000479656 FOSP01100 380 aaPredicted RBP12.75□□□□□ -0.37
APTX-223ENST00000479656 NDUFA8P51970 172 aa12.75□□□□□ -0.37
APTX-223ENST00000479656 SNW1Q13573 536 aaKnown RBP12.75□□□□□ -0.37
APTX-223ENST00000479656 IL17AQ16552 155 aa12.75□□□□□ -0.37
APTX-223ENST00000479656 GPAT2Q6NUI2 795 aa12.75□□□□□ -0.37
APTX-223ENST00000479656 POTEEQ6S8J3 1075 aa12.75□□□□□ -0.37
APTX-223ENST00000479656 CCDC73Q6ZRK6 1079 aa12.75□□□□□ -0.37
APTX-223ENST00000479656 SYAP1Q96A49 352 aaPredicted RBP12.75□□□□□ -0.37
APTX-223ENST00000479656 CSRNP2Q9H175 543 aa12.75□□□□□ -0.37
APTX-223ENST00000479656 ZNF214Q9UL59 606 aaPredicted RBP12.75□□□□□ -0.37
APTX-223ENST00000479656 AGTPBP1Q9UPW5 1226 aa12.75□□□□□ -0.37
APTX-223ENST00000479656 PARP14Q460N5 1801 aa12.75□□□□□ -0.37
APTX-223ENST00000479656 VWA3AA6NCI4 1184 aa12.74□□□□□ -0.37
APTX-223ENST00000479656 PEX10O60683 326 aa12.74□□□□□ -0.37
APTX-223ENST00000479656 OAZ1P54368 228 aa12.74□□□□□ -0.37
APTX-223ENST00000479656 IRX3P78415 501 aaPredicted RBP12.74□□□□□ -0.37
APTX-223ENST00000479656 PLS1Q14651 629 aa12.74□□□□□ -0.37
APTX-223ENST00000479656 ZSCAN23Q3MJ62 389 aa12.74□□□□□ -0.37
APTX-223ENST00000479656 RESP18Q5W5W9 173 aa12.74□□□□□ -0.37
APTX-223ENST00000479656 SNRNP48Q6IEG0 339 aaKnown RBP12.74□□□□□ -0.37
APTX-223ENST00000479656 ENGASEQ8NFI3 743 aa12.74□□□□□ -0.37
APTX-223ENST00000479656 ASCC2Q9H1I8 757 aaPredicted RBP12.74□□□□□ -0.37
APTX-223ENST00000479656 PNMA2Q9UL42 364 aa12.74□□□□□ -0.37
APTX-223ENST00000479656 ATP2A1O14983 1001 aa12.74□□□□□ -0.37
APTX-223ENST00000479656 PFKFB1P16118 471 aa12.74□□□□□ -0.37
APTX-223ENST00000479656 STAT3P40763 770 aa12.74□□□□□ -0.37
APTX-223ENST00000479656 USP11P51784 963 aa12.74□□□□□ -0.37
APTX-223ENST00000479656 FAM160A1Q05DH4 1040 aa12.74□□□□□ -0.37
APTX-223ENST00000479656 CCDC183Q5T5S1 534 aa12.74□□□□□ -0.37
APTX-223ENST00000479656 PPP4R3AQ6IN85 833 aa12.74□□□□□ -0.37
APTX-223ENST00000479656 LBX2Q6XYB7 198 aa12.74□□□□□ -0.37
APTX-223ENST00000479656 MCF2L2Q86YR7 1114 aa12.74□□□□□ -0.37
APTX-223ENST00000479656 ZNF579Q8NAF0 562 aaKnown RBP12.74□□□□□ -0.37
APTX-223ENST00000479656 FERMT2Q96AC1 680 aa12.74□□□□□ -0.37
APTX-223ENST00000479656 MS4A4AQ96JQ5 239 aa12.74□□□□□ -0.37
APTX-223ENST00000479656 KIF3CO14782 793 aa12.73□□□□□ -0.37
APTX-223ENST00000479656 SLC37A4O43826 429 aa12.73□□□□□ -0.37
APTX-223ENST00000479656 NEMFO60524 1076 aa12.73□□□□□ -0.37
APTX-223ENST00000479656 OSBPP22059 807 aa12.73□□□□□ -0.37
APTX-223ENST00000479656 HSD17B4P51659 736 aa12.73□□□□□ -0.37
APTX-223ENST00000479656 HUNKP57058 714 aa12.73□□□□□ -0.37
APTX-223ENST00000479656 ARHGAP4P98171 946 aa12.73□□□□□ -0.37
APTX-223ENST00000479656 CAMK4Q16566 473 aa12.73□□□□□ -0.37
APTX-223ENST00000479656 SPRYD7Q5W111 196 aa12.73□□□□□ -0.37
APTX-223ENST00000479656 ARL6IP4Q66PJ3 421 aaKnown RBP12.73□□□□□ -0.37
APTX-223ENST00000479656 USP49Q70CQ1 688 aa12.73□□□□□ -0.37
APTX-223ENST00000479656 TEX2Q8IWB9 1127 aa12.73□□□□□ -0.37
APTX-223ENST00000479656 FMR1NBQ8N0W7 255 aaPredicted RBP12.73□□□□□ -0.37
APTX-223ENST00000479656 CRYGNQ8WXF5 182 aa12.73□□□□□ -0.37
APTX-223ENST00000479656 TEX13BQ9BXU2 312 aa12.73□□□□□ -0.37
APTX-223ENST00000479656 RNF146Q9NTX7 359 aa12.73□□□□□ -0.37
APTX-223ENST00000479656 BTBD7Q9P203 1132 aa12.73□□□□□ -0.37
APTX-223ENST00000479656 LAD1O00515 517 aa12.72□□□□□ -0.37
APTX-223ENST00000479656 CETPP11597 493 aa12.72□□□□□ -0.37
APTX-223ENST00000479656 SREBF1P36956 1147 aa12.72□□□□□ -0.37
APTX-223ENST00000479656 GTF2A2P52657 109 aa12.72□□□□□ -0.37
APTX-223ENST00000479656 HERVK_113P62684 666 aa12.72□□□□□ -0.37
APTX-223ENST00000479656 UBXN2AP68543 259 aa12.72□□□□□ -0.37
APTX-223ENST00000479656 PABPC4Q13310 644 aaKnown RBP eCLIP12.72□□□□□ -0.37
APTX-223ENST00000479656 ORC2Q13416 577 aaPredicted RBP12.72□□□□□ -0.37
APTX-223ENST00000479656 NSMFQ6X4W1 530 aa12.72□□□□□ -0.37
APTX-223ENST00000479656 DTHD1Q6ZMT9 781 aa12.72□□□□□ -0.37
APTX-223ENST00000479656 EPSTI1Q96J88 318 aa12.72□□□□□ -0.37
APTX-223ENST00000479656 PANK2Q9BZ23 570 aa12.72□□□□□ -0.37
APTX-223ENST00000479656 DDX19AQ9NUU7 478 aaKnown RBP12.72□□□□□ -0.37
APTX-223ENST00000479656 COL20A1Q9P218 1284 aa12.72□□□□□ -0.37
APTX-223ENST00000479656 DDX25Q9UHL0 483 aaKnown RBP12.72□□□□□ -0.37
APTX-223ENST00000479656 HPSEQ9Y251 543 aa12.72□□□□□ -0.37
APTX-223ENST00000479656 LOC285556D6RIA3 1793 aa12.72□□□□□ -0.37
APTX-223ENST00000479656 COL11A1P12107 1806 aaPredicted RBP12.72□□□□□ -0.37
APTX-223ENST00000479656 CCL15-CCL14A0A0B4J2E2 113 aa12.72□□□□□ -0.37
APTX-223ENST00000479656 SYCE3A1L190 88 aa12.72□□□□□ -0.37
APTX-223ENST00000479656 ZNF202O95125 648 aa12.72□□□□□ -0.37
APTX-223ENST00000479656 OR52Z1P0C646 297 aa12.72□□□□□ -0.37
APTX-223ENST00000479656 RPS6P62753 249 aaKnown RBP12.72□□□□□ -0.37
APTX-223ENST00000479656 CALCRLQ16602 461 aa12.72□□□□□ -0.37
APTX-223ENST00000479656 CCL15Q16663 113 aa12.72□□□□□ -0.37
APTX-223ENST00000479656 RNF207Q6ZRF8 634 aa12.72□□□□□ -0.37
APTX-223ENST00000479656 MTMR9Q96QG7 549 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms